RNA–Protein interactions for RNA: ENST00000542966.1

SCNN1A-219, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 560 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-219ENST00000542966 ORAI2Q96SN7 254 aa24.11■■□□□ 1.45
SCNN1A-219ENST00000542966 DHX57Q6P158 1386 aaKnown RBP24.11■■□□□ 1.45
SCNN1A-219ENST00000542966 LAMC1P11047 1609 aa24.1■■□□□ 1.45
SCNN1A-219ENST00000542966 NHSL1Q5SYE7 1610 aa24.1■■□□□ 1.45
SCNN1A-219ENST00000542966 CDC42BPGQ6DT37 1551 aa24.08■■□□□ 1.45
SCNN1A-219ENST00000542966 NUTM2FA1L443 756 aa24.07■■□□□ 1.44
SCNN1A-219ENST00000542966 SPATA31A6Q5VVP1 1343 aa24.07■■□□□ 1.44
SCNN1A-219ENST00000542966 ESCO1Q5FWF5 840 aa24.05■■□□□ 1.44
SCNN1A-219ENST00000542966 LRRC59Q96AG4 307 aaKnown RBP24.05■■□□□ 1.44
SCNN1A-219ENST00000542966 SIRT1Q96EB6 747 aa24.05■■□□□ 1.44
SCNN1A-219ENST00000542966 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
SCNN1A-219ENST00000542966 LRP6O75581 1613 aa24.04■■□□□ 1.44
SCNN1A-219ENST00000542966 SAFB2Q14151 953 aaKnown RBP eCLIP24.04■■□□□ 1.44
SCNN1A-219ENST00000542966 STAC3Q96MF2 364 aa24.04■■□□□ 1.44
SCNN1A-219ENST00000542966 PRAM1Q96QH2 718 aa24.04■■□□□ 1.44
SCNN1A-219ENST00000542966 NUTM2BA6NNL0 878 aaPredicted RBP24.03■■□□□ 1.44
SCNN1A-219ENST00000542966 NUTM2EB1AL46 878 aaPredicted RBP24.03■■□□□ 1.44
SCNN1A-219ENST00000542966 MEX3CQ5U5Q3 659 aaKnown RBP24.03■■□□□ 1.44
SCNN1A-219ENST00000542966 NUTM2AQ8IVF1 878 aaPredicted RBP24.03■■□□□ 1.44
SCNN1A-219ENST00000542966 ADGRB1O14514 1584 aa24.02■■□□□ 1.44
SCNN1A-219ENST00000542966 POGKQ9P215 609 aa24.01■■□□□ 1.43
SCNN1A-219ENST00000542966 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
SCNN1A-219ENST00000542966 SOS2Q07890 1332 aaPredicted RBP23.98■■□□□ 1.43
SCNN1A-219ENST00000542966 DLC1Q96QB1 1528 aa23.98■■□□□ 1.43
SCNN1A-219ENST00000542966 PNPLA6Q8IY17 1366 aa23.97■■□□□ 1.43
SCNN1A-219ENST00000542966 FMN2Q9NZ56 1722 aa23.96■■□□□ 1.43
SCNN1A-219ENST00000542966 NPHP3Q7Z494 1330 aa23.95■■□□□ 1.42
SCNN1A-219ENST00000542966 FOXO3O43524 673 aa23.95■■□□□ 1.42
SCNN1A-219ENST00000542966 XPCQ01831 940 aaPredicted RBP23.94■■□□□ 1.42
SCNN1A-219ENST00000542966 SIN3AQ96ST3 1273 aa23.93■■□□□ 1.42
SCNN1A-219ENST00000542966 HIRIP3Q9BW71 556 aaPredicted RBP23.92■■□□□ 1.42
SCNN1A-219ENST00000542966 MINK1Q8N4C8 1332 aaPredicted RBP23.9■■□□□ 1.42
SCNN1A-219ENST00000542966 PXDNQ92626 1479 aa23.89■■□□□ 1.42
SCNN1A-219ENST00000542966 NEUROD1Q13562 356 aa23.89■■□□□ 1.41
SCNN1A-219ENST00000542966 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
SCNN1A-219ENST00000542966 ADAMTS2O95450 1211 aa23.87■■□□□ 1.41
SCNN1A-219ENST00000542966 TRIM26Q12899 539 aaPredicted RBP23.87■■□□□ 1.41
SCNN1A-219ENST00000542966 L3MBTL2Q969R5 705 aa23.87■■□□□ 1.41
SCNN1A-219ENST00000542966 PHF8Q9UPP1 1060 aa23.87■■□□□ 1.41
SCNN1A-219ENST00000542966 C8orf37Q96NL8 207 aa23.86■■□□□ 1.41
SCNN1A-219ENST00000542966 ADGRB2O60241 1585 aa23.86■■□□□ 1.41
SCNN1A-219ENST00000542966 KIF1AQ12756 1690 aa23.86■■□□□ 1.41
SCNN1A-219ENST00000542966 NBPF1Q3BBV0 1214 aa23.85■■□□□ 1.41
SCNN1A-219ENST00000542966 AFF2P51816 1311 aa23.84■■□□□ 1.41
SCNN1A-219ENST00000542966 RGPD8O14715 1765 aaPredicted RBP23.84■■□□□ 1.41
SCNN1A-219ENST00000542966 KRT28Q7Z3Y7 464 aa23.84■■□□□ 1.41
SCNN1A-219ENST00000542966 UPF1Q92900 1129 aaKnown RBP eCLIP23.83■■□□□ 1.41
SCNN1A-219ENST00000542966 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.41
SCNN1A-219ENST00000542966 KIAA1210Q9ULL0 1709 aa23.82■■□□□ 1.4
SCNN1A-219ENST00000542966 WASLO00401 505 aaPredicted RBP23.82■■□□□ 1.4
SCNN1A-219ENST00000542966 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
SCNN1A-219ENST00000542966 ANKARQ7Z5J8 1434 aa23.82■■□□□ 1.4
SCNN1A-219ENST00000542966 USP32Q8NFA0 1604 aa23.81■■□□□ 1.4
SCNN1A-219ENST00000542966 RXRBP28702 533 aa23.8■■□□□ 1.4
SCNN1A-219ENST00000542966 NGLY1Q96IV0 654 aa23.8■■□□□ 1.4
SCNN1A-219ENST00000542966 COL22A1Q8NFW1 1626 aaPredicted RBP23.8■■□□□ 1.4
SCNN1A-219ENST00000542966 SPATA31A3Q5VYP0 1347 aa23.79■■□□□ 1.4
SCNN1A-219ENST00000542966 PRR36Q9H6K5 1346 aa23.79■■□□□ 1.4
SCNN1A-219ENST00000542966 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
SCNN1A-219ENST00000542966 PSME1Q06323 249 aa23.78■■□□□ 1.4
SCNN1A-219ENST00000542966 TULP4Q9NRJ4 1543 aa23.78■■□□□ 1.4
SCNN1A-219ENST00000542966 PLEKHG5O94827 1062 aa23.74■■□□□ 1.39
SCNN1A-219ENST00000542966 TNS3Q68CZ2 1445 aa23.74■■□□□ 1.39
SCNN1A-219ENST00000542966 LMOD2Q6P5Q4 547 aa23.73■■□□□ 1.39
SCNN1A-219ENST00000542966 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
SCNN1A-219ENST00000542966 QTRT2Q9H974 415 aaKnown RBP23.72■■□□□ 1.39
SCNN1A-219ENST00000542966 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
SCNN1A-219ENST00000542966 NUDT16Q96DE0 195 aaKnown RBP23.71■■□□□ 1.39
SCNN1A-219ENST00000542966 USP21Q9UK80 565 aa23.71■■□□□ 1.39
SCNN1A-219ENST00000542966 NGDNQ8NEJ9 315 aaKnown RBP23.7■■□□□ 1.38
SCNN1A-219ENST00000542966 ATP7BP35670 1465 aa23.69■■□□□ 1.38
SCNN1A-219ENST00000542966 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
SCNN1A-219ENST00000542966 CENPJQ9HC77 1338 aaPredicted RBP23.69■■□□□ 1.38
SCNN1A-219ENST00000542966 HAP1P54257 671 aaPredicted RBP23.68■■□□□ 1.38
SCNN1A-219ENST00000542966 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
SCNN1A-219ENST00000542966 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
SCNN1A-219ENST00000542966 TRPM1Q7Z4N2 1603 aa23.68■■□□□ 1.38
SCNN1A-219ENST00000542966 ROCK2O75116 1388 aaKnown RBP23.67■■□□□ 1.38
SCNN1A-219ENST00000542966 RBM6P78332 1123 aaKnown RBP23.66■■□□□ 1.38
SCNN1A-219ENST00000542966 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
SCNN1A-219ENST00000542966 NBPF8Q3BBV2 869 aa23.65■■□□□ 1.38
SCNN1A-219ENST00000542966 TONSLQ96HA7 1378 aa23.65■■□□□ 1.38
SCNN1A-219ENST00000542966 SRPK2P78362 688 aaKnown RBP23.64■■□□□ 1.37
SCNN1A-219ENST00000542966 PCGF6Q9BYE7 350 aa23.64■■□□□ 1.37
SCNN1A-219ENST00000542966 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
SCNN1A-219ENST00000542966 PAK3O75914 559 aaPredicted RBP23.63■■□□□ 1.37
SCNN1A-219ENST00000542966 ITSN1Q15811 1721 aa23.63■■□□□ 1.37
SCNN1A-219ENST00000542966 MARF1Q9Y4F3 1742 aaKnown RBP23.63■■□□□ 1.37
SCNN1A-219ENST00000542966 TRPM3Q9HCF6 1732 aaPredicted RBP23.62■■□□□ 1.37
SCNN1A-219ENST00000542966 CABP2Q9NPB3 220 aa23.62■■□□□ 1.37
SCNN1A-219ENST00000542966 CCDC61Q9Y6R9 512 aa23.62■■□□□ 1.37
SCNN1A-219ENST00000542966 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
SCNN1A-219ENST00000542966 QRICH2Q9H0J4 1663 aa23.61■■□□□ 1.37
SCNN1A-219ENST00000542966 BCL9LQ86UU0 1499 aa23.61■■□□□ 1.37
SCNN1A-219ENST00000542966 RGS12O14924 1447 aa23.59■■□□□ 1.37
SCNN1A-219ENST00000542966 ATRNO75882 1429 aa23.59■■□□□ 1.37
SCNN1A-219ENST00000542966 ACEP12821 1306 aa23.59■■□□□ 1.37
SCNN1A-219ENST00000542966 TOPAZ1Q8N9V7 1692 aa23.58■■□□□ 1.37
SCNN1A-219ENST00000542966 ALS2Q96Q42 1657 aa23.57■■□□□ 1.36
SCNN1A-219ENST00000542966 ABCA3Q99758 1704 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms