RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 ZNF598Q86UK7 904 aaKnown RBP6.84□□□□□ -1.31
SFSWAP-211ENST00000542813 CLUAP1Q96AJ1 413 aa6.84□□□□□ -1.31
SFSWAP-211ENST00000542813 PPEF1O14829 653 aaPredicted RBP6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PRR20EP86478 221 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PRR20CP86479 221 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PRR20DP86480 221 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PRR20BP86481 221 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PRR20AP86496 221 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 PCMTD1Q96MG8 357 aaPredicted RBP6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 SLC6A16Q9GZN6 736 aa6.83□□□□□ -1.32
SFSWAP-211ENST00000542813 ZNF787Q6DD87 383 aa6.82□□□□□ -1.32
SFSWAP-211ENST00000542813 LIAT1Q6ZQX7 453 aa6.82□□□□□ -1.32
SFSWAP-211ENST00000542813 SCUBE3Q8IX30 993 aa6.82□□□□□ -1.32
SFSWAP-211ENST00000542813 ZNF697Q5TEC3 545 aa6.81□□□□□ -1.32
SFSWAP-211ENST00000542813 DGAT1O75907 488 aa6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 FECHP22830 423 aa6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 MCM6Q14566 821 aa6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 PUS10Q3MIT2 529 aaKnown RBP6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 PKDCCQ504Y2 493 aa6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 SPSB2Q99619 263 aa6.8□□□□□ -1.32
SFSWAP-211ENST00000542813 GIGYF2Q6Y7W6 1299 aaKnown RBP6.79□□□□□ -1.32
SFSWAP-211ENST00000542813 GDF9O60383 454 aa6.78□□□□□ -1.32
SFSWAP-211ENST00000542813 MS4A1P11836 297 aa6.78□□□□□ -1.32
SFSWAP-211ENST00000542813 RDH13Q8NBN7 331 aa6.78□□□□□ -1.32
SFSWAP-211ENST00000542813 ZNF775Q96BV0 537 aaPredicted RBP6.78□□□□□ -1.32
SFSWAP-211ENST00000542813 MYT1Q01538 1121 aa6.77□□□□□ -1.33
SFSWAP-211ENST00000542813 SH3D19Q5HYK7 790 aa6.77□□□□□ -1.33
SFSWAP-211ENST00000542813 PLA2G2CQ5R387 149 aa6.77□□□□□ -1.33
SFSWAP-211ENST00000542813 PROSER2Q86WR7 435 aaPredicted RBP6.77□□□□□ -1.33
SFSWAP-211ENST00000542813 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
SFSWAP-211ENST00000542813 TNFRSF10AO00220 468 aa6.76□□□□□ -1.33
SFSWAP-211ENST00000542813 MORN1Q5T089 497 aa6.76□□□□□ -1.33
SFSWAP-211ENST00000542813 SULF1Q8IWU6 871 aa6.76□□□□□ -1.33
SFSWAP-211ENST00000542813 FAM187AA6NFU0 413 aa6.75□□□□□ -1.33
SFSWAP-211ENST00000542813 ATP6V1AP38606 617 aa6.75□□□□□ -1.33
SFSWAP-211ENST00000542813 FUT2Q10981 343 aa6.75□□□□□ -1.33
SFSWAP-211ENST00000542813 THAP11Q96EK4 314 aa6.75□□□□□ -1.33
SFSWAP-211ENST00000542813 ZNF777Q9ULD5 760 aaPredicted RBP6.75□□□□□ -1.33
SFSWAP-211ENST00000542813 FMNL1O95466 1100 aaPredicted RBP6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 GCGRP47871 477 aa6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 RPIAP49247 311 aa6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 CCDC97Q96F63 343 aaPredicted RBP6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 TRAIPQ9BWF2 469 aa6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 SERPINA10Q9UK55 444 aa6.74□□□□□ -1.33
SFSWAP-211ENST00000542813 RAD21O60216 631 aa6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 NLRP7Q8WX94 980 aa6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 REPIN1Q9BWE0 567 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 FCF1Q9Y324 198 aaKnown RBP6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 SALL2Q9Y467 1007 aaPredicted RBP6.73□□□□□ -1.33
SFSWAP-211ENST00000542813 KCTD17Q8N5Z5 321 aa6.72□□□□□ -1.33
SFSWAP-211ENST00000542813 PKD2L1Q9P0L9 805 aa6.72□□□□□ -1.33
SFSWAP-211ENST00000542813 SLC27A5Q9Y2P5 690 aa6.72□□□□□ -1.33
SFSWAP-211ENST00000542813 CD2BP2O95400 341 aaKnown RBP6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 CLCN1P35523 988 aa6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 FOXC1Q12948 553 aa6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 SKIV2LQ15477 1246 aaKnown RBP6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 GRIPAP1Q4V328 841 aa6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 FNBP4Q8N3X1 1017 aaPredicted RBP6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 FAM160A2Q8N612 972 aaPredicted RBP6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 POM121Q96HA1 1249 aa6.71□□□□□ -1.34
SFSWAP-211ENST00000542813 MSS51Q4VC12 460 aa6.7□□□□□ -1.34
SFSWAP-211ENST00000542813 BRICD5Q6PL45 260 aa6.7□□□□□ -1.34
SFSWAP-211ENST00000542813 GPCPD1Q9NPB8 672 aa6.7□□□□□ -1.34
SFSWAP-211ENST00000542813 AAASQ9NRG9 546 aa6.69□□□□□ -1.34
SFSWAP-211ENST00000542813 ATP1B4Q9UN42 357 aaPredicted RBP6.69□□□□□ -1.34
SFSWAP-211ENST00000542813 POTECB2RU33 542 aa6.68□□□□□ -1.34
SFSWAP-211ENST00000542813 MDM2Q00987 491 aaPredicted RBP6.68□□□□□ -1.34
SFSWAP-211ENST00000542813 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
SFSWAP-211ENST00000542813 PRDM9Q9NQV7 894 aa6.68□□□□□ -1.34
SFSWAP-211ENST00000542813 TOR4AQ9NXH8 423 aa6.68□□□□□ -1.34
SFSWAP-211ENST00000542813 SPDYE5A6NIY4 337 aa6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 ST8SIA5O15466 376 aa6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 ZBTB24O43167 697 aaPredicted RBP6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 SSTR3P32745 418 aaPredicted RBP6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 Q3C1V9 767 aa6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 RNF19BQ6ZMZ0 732 aa6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 CRIPAKQ8N1N5 446 aa6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 PROCA1Q8NCQ7 364 aaPredicted RBP6.67□□□□□ -1.34
SFSWAP-211ENST00000542813 AVPP01185 164 aa6.66□□□□□ -1.34
SFSWAP-211ENST00000542813 CD46P15529 392 aa6.66□□□□□ -1.34
SFSWAP-211ENST00000542813 CYP4X1Q8N118 509 aa6.66□□□□□ -1.34
SFSWAP-211ENST00000542813 BEGAINQ9BUH8 593 aa6.66□□□□□ -1.34
SFSWAP-211ENST00000542813 RETREG2Q8NC44 543 aa6.65□□□□□ -1.34
SFSWAP-211ENST00000542813 POLR3EQ9NVU0 708 aa6.65□□□□□ -1.34
SFSWAP-211ENST00000542813 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
SFSWAP-211ENST00000542813 MMP16P51512 607 aa6.64□□□□□ -1.35
SFSWAP-211ENST00000542813 CTC1Q2NKJ3 1217 aa6.64□□□□□ -1.35
SFSWAP-211ENST00000542813 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.64□□□□□ -1.35
SFSWAP-211ENST00000542813 KDM4AO75164 1064 aa6.63□□□□□ -1.35
SFSWAP-211ENST00000542813 ZNF330Q9Y3S2 320 aaPredicted RBP6.63□□□□□ -1.35
SFSWAP-211ENST00000542813 TTC24A2A3L6 582 aaPredicted RBP6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 WNT7AO00755 349 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 AXIN1O15169 862 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 USP46P62068 366 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 TRIM32Q13049 653 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 TMCO4Q5TGY1 634 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 MYSM1Q5VVJ2 828 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 BANK1Q8NDB2 785 aa6.62□□□□□ -1.35
SFSWAP-211ENST00000542813 USB1Q9BQ65 265 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms