RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
DDX11-221ENST00000542661 NBPF1Q3BBV0 1214 aa20.28■□□□□ 0.84
DDX11-221ENST00000542661 DISP3Q9P2K9 1392 aa20.28■□□□□ 0.84
DDX11-221ENST00000542661 PLEKHH1Q9ULM0 1364 aa20.28■□□□□ 0.84
DDX11-221ENST00000542661 CDC42BPGQ6DT37 1551 aa20.27■□□□□ 0.84
DDX11-221ENST00000542661 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.83
DDX11-221ENST00000542661 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
DDX11-221ENST00000542661 MST1RQ04912 1400 aa20.26■□□□□ 0.83
DDX11-221ENST00000542661 ROCK2O75116 1388 aaKnown RBP20.24■□□□□ 0.83
DDX11-221ENST00000542661 HSPA1LP34931 641 aa20.24■□□□□ 0.83
DDX11-221ENST00000542661 SAFB2Q14151 953 aaKnown RBP eCLIP20.23■□□□□ 0.83
DDX11-221ENST00000542661 NBPF8Q3BBV2 869 aa20.23■□□□□ 0.83
DDX11-221ENST00000542661 ARHGEF28Q8N1W1 1705 aaKnown RBP20.23■□□□□ 0.83
DDX11-221ENST00000542661 C1orf167Q5SNV9 1468 aa20.21■□□□□ 0.83
DDX11-221ENST00000542661 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
DDX11-221ENST00000542661 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.82
DDX11-221ENST00000542661 RALGAPBQ86X10 1494 aa20.19■□□□□ 0.82
DDX11-221ENST00000542661 ADGRB2O60241 1585 aa20.19■□□□□ 0.82
DDX11-221ENST00000542661 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
DDX11-221ENST00000542661 FMN2Q9NZ56 1722 aa20.17■□□□□ 0.82
DDX11-221ENST00000542661 EIF3AQ14152 1382 aaKnown RBP20.17■□□□□ 0.82
DDX11-221ENST00000542661 CARD11Q9BXL7 1154 aa20.16■□□□□ 0.82
DDX11-221ENST00000542661 CENPJQ9HC77 1338 aaPredicted RBP20.16■□□□□ 0.82
DDX11-221ENST00000542661 AHDC1Q5TGY3 1603 aaPredicted RBP20.15■□□□□ 0.82
DDX11-221ENST00000542661 PHLPP1O60346 1717 aa20.14■□□□□ 0.81
DDX11-221ENST00000542661 WASLO00401 505 aaPredicted RBP20.14■□□□□ 0.81
DDX11-221ENST00000542661 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
DDX11-221ENST00000542661 ILDR2Q71H61 639 aa20.14■□□□□ 0.81
DDX11-221ENST00000542661 HIRIP3Q9BW71 556 aaPredicted RBP20.14■□□□□ 0.81
DDX11-221ENST00000542661 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
DDX11-221ENST00000542661 ORAI2Q96SN7 254 aa20.13■□□□□ 0.81
DDX11-221ENST00000542661 NUTM2FA1L443 756 aa20.12■□□□□ 0.81
DDX11-221ENST00000542661 NHSL1Q5SYE7 1610 aa20.11■□□□□ 0.81
DDX11-221ENST00000542661 QRICH2Q9H0J4 1663 aa20.1■□□□□ 0.81
DDX11-221ENST00000542661 TULP4Q9NRJ4 1543 aa20.09■□□□□ 0.81
DDX11-221ENST00000542661 COL16A1Q07092 1604 aaPredicted RBP20.09■□□□□ 0.81
DDX11-221ENST00000542661 NPHP3Q7Z494 1330 aa20.08■□□□□ 0.81
DDX11-221ENST00000542661 KIF1AQ12756 1690 aa20.07■□□□□ 0.8
DDX11-221ENST00000542661 CDK19Q9BWU1 502 aa20.07■□□□□ 0.8
DDX11-221ENST00000542661 SOCS7O14512 581 aa20.06■□□□□ 0.8
DDX11-221ENST00000542661 LRRC59Q96AG4 307 aaKnown RBP20.06■□□□□ 0.8
DDX11-221ENST00000542661 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
DDX11-221ENST00000542661 JCADQ9P266 1359 aa20.06■□□□□ 0.8
DDX11-221ENST00000542661 RGPD8O14715 1765 aaPredicted RBP20.06■□□□□ 0.8
DDX11-221ENST00000542661 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
DDX11-221ENST00000542661 EVC2Q86UK5 1308 aa20.04■□□□□ 0.8
DDX11-221ENST00000542661 FOXO3O43524 673 aa20.04■□□□□ 0.8
DDX11-221ENST00000542661 DDX17Q92841 729 aaKnown RBP20.04■□□□□ 0.8
DDX11-221ENST00000542661 NUDT16Q96DE0 195 aaKnown RBP20.04■□□□□ 0.8
DDX11-221ENST00000542661 SBNO2Q9Y2G9 1366 aa20.04■□□□□ 0.8
DDX11-221ENST00000542661 SOS2Q07890 1332 aaPredicted RBP20.03■□□□□ 0.8
DDX11-221ENST00000542661 PRR36Q9H6K5 1346 aa20.02■□□□□ 0.8
DDX11-221ENST00000542661 ITSN1Q15811 1721 aa20.02■□□□□ 0.8
DDX11-221ENST00000542661 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
DDX11-221ENST00000542661 SRPK2P78362 688 aaKnown RBP20.02■□□□□ 0.8
DDX11-221ENST00000542661 ATP7BP35670 1465 aa20.02■□□□□ 0.8
DDX11-221ENST00000542661 CCDC61Q9Y6R9 512 aa20.01■□□□□ 0.79
DDX11-221ENST00000542661 PSME1Q06323 249 aa20■□□□□ 0.79
DDX11-221ENST00000542661 PXDNQ92626 1479 aa19.99■□□□□ 0.79
DDX11-221ENST00000542661 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
DDX11-221ENST00000542661 SHPRHQ149N8 1683 aa19.99■□□□□ 0.79
DDX11-221ENST00000542661 SPATA31A6Q5VVP1 1343 aa19.99■□□□□ 0.79
DDX11-221ENST00000542661 USP47Q96K76 1375 aa19.98■□□□□ 0.79
DDX11-221ENST00000542661 KRT28Q7Z3Y7 464 aa19.98■□□□□ 0.79
DDX11-221ENST00000542661 NGDNQ8NEJ9 315 aaKnown RBP19.98■□□□□ 0.79
DDX11-221ENST00000542661 CABP2Q9NPB3 220 aa19.98■□□□□ 0.79
DDX11-221ENST00000542661 ST20-MTHFSA0A0A6YYL1 179 aa19.97■□□□□ 0.79
DDX11-221ENST00000542661 PLEKHG3A1L390 1219 aa19.96■□□□□ 0.79
DDX11-221ENST00000542661 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
DDX11-221ENST00000542661 TOPAZ1Q8N9V7 1692 aa19.96■□□□□ 0.79
DDX11-221ENST00000542661 PNPLA6Q8IY17 1366 aa19.95■□□□□ 0.78
DDX11-221ENST00000542661 MED1Q15648 1581 aaPredicted RBP19.94■□□□□ 0.78
DDX11-221ENST00000542661 SBNO1A3KN83 1393 aa19.94■□□□□ 0.78
DDX11-221ENST00000542661 ATAD2Q6PL18 1390 aa19.94■□□□□ 0.78
DDX11-221ENST00000542661 PPIP5K1Q6PFW1 1433 aa19.93■□□□□ 0.78
DDX11-221ENST00000542661 TESK2Q96S53 571 aa19.93■□□□□ 0.78
DDX11-221ENST00000542661 POLR3AO14802 1390 aaPredicted RBP19.93■□□□□ 0.78
DDX11-221ENST00000542661 PUS7Q96PZ0 661 aaKnown RBP19.92■□□□□ 0.78
DDX11-221ENST00000542661 SPATA31A3Q5VYP0 1347 aa19.92■□□□□ 0.78
DDX11-221ENST00000542661 ACEP12821 1306 aa19.91■□□□□ 0.78
DDX11-221ENST00000542661 PHF23Q9BUL5 403 aaPredicted RBP19.9■□□□□ 0.78
DDX11-221ENST00000542661 TNS3Q68CZ2 1445 aa19.9■□□□□ 0.78
DDX11-221ENST00000542661 ARHGEF10O15013 1369 aa19.89■□□□□ 0.77
DDX11-221ENST00000542661 COL22A1Q8NFW1 1626 aaPredicted RBP19.89■□□□□ 0.77
DDX11-221ENST00000542661 CABP1Q9NZU7 370 aa19.89■□□□□ 0.77
DDX11-221ENST00000542661 EIF4G2P78344 907 aaKnown RBP eCLIP19.88■□□□□ 0.77
DDX11-221ENST00000542661 TMF1P82094 1093 aa19.88■□□□□ 0.77
DDX11-221ENST00000542661 NUTM2BA6NNL0 878 aaPredicted RBP19.87■□□□□ 0.77
DDX11-221ENST00000542661 NUTM2EB1AL46 878 aaPredicted RBP19.87■□□□□ 0.77
DDX11-221ENST00000542661 NUTM2AQ8IVF1 878 aaPredicted RBP19.87■□□□□ 0.77
DDX11-221ENST00000542661 BRD4O60885 1362 aaPredicted RBP19.86■□□□□ 0.77
DDX11-221ENST00000542661 TRPM3Q9HCF6 1732 aaPredicted RBP19.86■□□□□ 0.77
DDX11-221ENST00000542661 CDCA8Q53HL2 280 aa19.86■□□□□ 0.77
DDX11-221ENST00000542661 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
DDX11-221ENST00000542661 LMOD2Q6P5Q4 547 aa19.86■□□□□ 0.77
DDX11-221ENST00000542661 PAK3O75914 559 aaPredicted RBP19.85■□□□□ 0.77
DDX11-221ENST00000542661 ZNF692Q9BU19 519 aaPredicted RBP19.85■□□□□ 0.77
DDX11-221ENST00000542661 LRP6O75581 1613 aa19.84■□□□□ 0.77
DDX11-221ENST00000542661 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.76
DDX11-221ENST00000542661 ALS2Q96Q42 1657 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms