RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 STK25O00506 426 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 PANK3Q9H999 370 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 RCAN3Q9UKA8 241 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 KIAA1210Q9ULL0 1709 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 CLTCL1P53675 1640 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 SYNMO15061 1565 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 INO80Q9ULG1 1556 aaPredicted RBP6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 ABCA9Q8IUA7 1624 aa6.92□□□□□ -1.3
ATPAF1-212ENST00000542495 SCAF11Q99590 1463 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-212ENST00000542495 DCAF8Q5TAQ9 597 aa6.91□□□□□ -1.3
ATPAF1-212ENST00000542495 DCBLD2Q96PD2 775 aa6.91□□□□□ -1.3
ATPAF1-212ENST00000542495 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
ATPAF1-212ENST00000542495 SPAG9O60271 1321 aaKnown RBP6.91□□□□□ -1.3
ATPAF1-212ENST00000542495 ADGRL1O94910 1474 aa6.9□□□□□ -1.3
ATPAF1-212ENST00000542495 SENP3-EIF4A1A0A087X0R7 540 aa6.9□□□□□ -1.3
ATPAF1-212ENST00000542495 VGFO15240 615 aaPredicted RBP6.9□□□□□ -1.3
ATPAF1-212ENST00000542495 MYOM1P52179 1685 aa6.9□□□□□ -1.3
ATPAF1-212ENST00000542495 TMEM132AQ24JP5 1023 aa6.9□□□□□ -1.31
ATPAF1-212ENST00000542495 CC2D1BQ5T0F9 858 aaKnown RBP6.9□□□□□ -1.31
ATPAF1-212ENST00000542495 ERICH6Q7L0X2 663 aa6.9□□□□□ -1.31
ATPAF1-212ENST00000542495 EXOC6Q8TAG9 804 aa6.9□□□□□ -1.31
ATPAF1-212ENST00000542495 MYT1LQ9UL68 1186 aa6.9□□□□□ -1.31
ATPAF1-212ENST00000542495 ATP7AQ04656 1500 aa6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 MROH1Q8NDA8 1641 aa6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 PIK3C2GO75747 1445 aa6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 CDCA7LQ96GN5 454 aa6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 MYOM2P54296 1465 aa6.89□□□□□ -1.31
ATPAF1-212ENST00000542495 CD109Q6YHK3 1445 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 ASXL1Q8IXJ9 1541 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 TCERG1O14776 1098 aaKnown RBP6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 CDCA8Q53HL2 280 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 ZNF521Q96K83 1311 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 IFT172Q9UG01 1749 aa6.88□□□□□ -1.31
ATPAF1-212ENST00000542495 MS4A1P11836 297 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 PPP2R1AP30153 589 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 AFAP1Q8N556 730 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 IPO9Q96P70 1041 aaKnown RBP6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 SGIP1Q9BQI5 828 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 FANCAO15360 1455 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 LMTK2Q8IWU2 1503 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 NRXN1Q9ULB1 1477 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 CHRM1P11229 460 aaPredicted RBP6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 CLCN6P51797 869 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 ADAMTS8Q9UP79 889 aa6.87□□□□□ -1.31
ATPAF1-212ENST00000542495 MYO3AQ8NEV4 1616 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 KDM5AP29375 1690 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 EIF3AQ14152 1382 aaKnown RBP6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 KANK1Q14678 1352 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 PAK3O75914 559 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 FAM212AQ96EL1 285 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 BCL11BQ9C0K0 894 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 KNSTRNQ9Y448 316 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 SALL2Q9Y467 1007 aaPredicted RBP6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 ABCA6Q8N139 1617 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 EFCAB6Q5THR3 1501 aa6.86□□□□□ -1.31
ATPAF1-212ENST00000542495 PLEKHH1Q9ULM0 1364 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 ANP32AP39687 249 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 MNX1P50219 401 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 ZFP91Q96JP5 570 aaPredicted RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 ARXQ96QS3 562 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 STK24Q9Y6E0 443 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 ERVK-7P63135 1459 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 SBNO2Q9Y2G9 1366 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 PRR29P0C7W0 189 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 DUSP27Q5VZP5 1158 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 TRMT2AQ8IZ69 625 aaKnown RBP6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 CREBZFQ9NS37 354 aa6.85□□□□□ -1.31
ATPAF1-212ENST00000542495 KIDINS220Q9ULH0 1771 aa6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 KIF1BO60333 1816 aa6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 ILDR1Q86SU0 546 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 CRBNQ96SW2 442 aa6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 BACH2Q9BYV9 841 aa6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 RYDENQ9NUL5 291 aaKnown RBP6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 FARP1Q9Y4F1 1045 aaPredicted RBP6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 SETBP1Q9Y6X0 1596 aa6.84□□□□□ -1.31
ATPAF1-212ENST00000542495 MROH2AA6NES4 1674 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 ADGRB3O60242 1522 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 UGGT1Q9NYU2 1555 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 PDE4AP27815 886 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 BCL11AQ9H165 835 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 KDM2BQ8NHM5 1336 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 HECW2Q9P2P5 1572 aa6.83□□□□□ -1.32
ATPAF1-212ENST00000542495 KIF3BO15066 747 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 PLIN1O60240 522 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 SLFN5Q08AF3 891 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 WDR43Q15061 677 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 RASEFQ8IZ41 740 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 GOLGA2Q08379 1002 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 CFAP70Q5T0N1 1121 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 NGEFQ8N5V2 710 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 ADGRF5Q8IZF2 1346 aa6.82□□□□□ -1.32
ATPAF1-212ENST00000542495 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-212ENST00000542495 ZNF518AQ6AHZ1 1483 aa6.81□□□□□ -1.32
ATPAF1-212ENST00000542495 C20orf194Q5TEA3 1177 aa6.81□□□□□ -1.32
ATPAF1-212ENST00000542495 ZNF579Q8NAF0 562 aaKnown RBP6.81□□□□□ -1.32
ATPAF1-212ENST00000542495 KCNV2Q8TDN2 545 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms