RNA–Protein interactions for RNA: ENST00000542462.1

PTPN6-217, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-217ENST00000542462 SIRT1Q96EB6 747 aa24.28■■□□□ 1.48
PTPN6-217ENST00000542462 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
PTPN6-217ENST00000542462 POTEAQ6S8J7 498 aa24.23■■□□□ 1.47
PTPN6-217ENST00000542462 LRRC59Q96AG4 307 aaKnown RBP24.23■■□□□ 1.47
PTPN6-217ENST00000542462 SPATA31A6Q5VVP1 1343 aa24.23■■□□□ 1.47
PTPN6-217ENST00000542462 ESCO1Q5FWF5 840 aa24.22■■□□□ 1.47
PTPN6-217ENST00000542462 PRAM1Q96QH2 718 aa24.22■■□□□ 1.47
PTPN6-217ENST00000542462 SAFB2Q14151 953 aaKnown RBP eCLIP24.21■■□□□ 1.47
PTPN6-217ENST00000542462 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
PTPN6-217ENST00000542462 LRP6O75581 1613 aa24.21■■□□□ 1.47
PTPN6-217ENST00000542462 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
PTPN6-217ENST00000542462 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
PTPN6-217ENST00000542462 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
PTPN6-217ENST00000542462 TRAK1Q9UPV9 953 aa24.19■■□□□ 1.46
PTPN6-217ENST00000542462 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
PTPN6-217ENST00000542462 ADGRB1O14514 1584 aa24.17■■□□□ 1.46
PTPN6-217ENST00000542462 NHSL1Q5SYE7 1610 aa24.16■■□□□ 1.46
PTPN6-217ENST00000542462 CDC42BPGQ6DT37 1551 aa24.16■■□□□ 1.46
PTPN6-217ENST00000542462 FOXO3O43524 673 aa24.15■■□□□ 1.46
PTPN6-217ENST00000542462 MEX3CQ5U5Q3 659 aaKnown RBP24.15■■□□□ 1.46
PTPN6-217ENST00000542462 POGKQ9P215 609 aa24.15■■□□□ 1.46
PTPN6-217ENST00000542462 KNDC1Q76NI1 1749 aa24.15■■□□□ 1.46
PTPN6-217ENST00000542462 PNPLA6Q8IY17 1366 aa24.15■■□□□ 1.46
PTPN6-217ENST00000542462 XPCQ01831 940 aaPredicted RBP24.14■■□□□ 1.45
PTPN6-217ENST00000542462 SIN3AQ96ST3 1273 aa24.14■■□□□ 1.45
PTPN6-217ENST00000542462 LAMC1P11047 1609 aa24.12■■□□□ 1.45
PTPN6-217ENST00000542462 SHPRHQ149N8 1683 aa24.11■■□□□ 1.45
PTPN6-217ENST00000542462 HIRIP3Q9BW71 556 aaPredicted RBP24.1■■□□□ 1.45
PTPN6-217ENST00000542462 DLC1Q96QB1 1528 aa24.1■■□□□ 1.45
PTPN6-217ENST00000542462 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
PTPN6-217ENST00000542462 NBPF1Q3BBV0 1214 aa24.08■■□□□ 1.45
PTPN6-217ENST00000542462 MINK1Q8N4C8 1332 aaPredicted RBP24.08■■□□□ 1.44
PTPN6-217ENST00000542462 L3MBTL2Q969R5 705 aa24.07■■□□□ 1.44
PTPN6-217ENST00000542462 NEUROD1Q13562 356 aa24.06■■□□□ 1.44
PTPN6-217ENST00000542462 PHF8Q9UPP1 1060 aa24.05■■□□□ 1.44
PTPN6-217ENST00000542462 PXDNQ92626 1479 aa24.05■■□□□ 1.44
PTPN6-217ENST00000542462 ADAMTS2O95450 1211 aa24.04■■□□□ 1.44
PTPN6-217ENST00000542462 TRIM26Q12899 539 aaPredicted RBP24.03■■□□□ 1.44
PTPN6-217ENST00000542462 ZNF772Q68DY9 489 aaPredicted RBP24.03■■□□□ 1.44
PTPN6-217ENST00000542462 C8orf37Q96NL8 207 aa24.03■■□□□ 1.44
PTPN6-217ENST00000542462 FMN2Q9NZ56 1722 aa24.02■■□□□ 1.44
PTPN6-217ENST00000542462 KRT28Q7Z3Y7 464 aa24.02■■□□□ 1.44
PTPN6-217ENST00000542462 AFF2P51816 1311 aa24.02■■□□□ 1.44
PTPN6-217ENST00000542462 WASLO00401 505 aaPredicted RBP24■■□□□ 1.43
PTPN6-217ENST00000542462 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
PTPN6-217ENST00000542462 PRR36Q9H6K5 1346 aa24■■□□□ 1.43
PTPN6-217ENST00000542462 SPATA31A3Q5VYP0 1347 aa23.98■■□□□ 1.43
PTPN6-217ENST00000542462 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
PTPN6-217ENST00000542462 PSME1Q06323 249 aa23.95■■□□□ 1.42
PTPN6-217ENST00000542462 ANKARQ7Z5J8 1434 aa23.94■■□□□ 1.42
PTPN6-217ENST00000542462 ADGRB2O60241 1585 aa23.94■■□□□ 1.42
PTPN6-217ENST00000542462 RXRBP28702 533 aa23.93■■□□□ 1.42
PTPN6-217ENST00000542462 CDK19Q9BWU1 502 aa23.93■■□□□ 1.42
PTPN6-217ENST00000542462 QTRT2Q9H974 415 aaKnown RBP23.93■■□□□ 1.42
PTPN6-217ENST00000542462 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
PTPN6-217ENST00000542462 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
PTPN6-217ENST00000542462 NUDT16Q96DE0 195 aaKnown RBP23.91■■□□□ 1.42
PTPN6-217ENST00000542462 FNBP4Q8N3X1 1017 aaPredicted RBP23.9■■□□□ 1.42
PTPN6-217ENST00000542462 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.42
PTPN6-217ENST00000542462 PLEKHG5O94827 1062 aa23.89■■□□□ 1.41
PTPN6-217ENST00000542462 NBPF8Q3BBV2 869 aa23.89■■□□□ 1.41
PTPN6-217ENST00000542462 CABLES1Q8TDN4 633 aa23.89■■□□□ 1.41
PTPN6-217ENST00000542462 KIF1AQ12756 1690 aa23.89■■□□□ 1.41
PTPN6-217ENST00000542462 USP21Q9UK80 565 aa23.88■■□□□ 1.41
PTPN6-217ENST00000542462 TULP4Q9NRJ4 1543 aa23.88■■□□□ 1.41
PTPN6-217ENST00000542462 SBNO1A3KN83 1393 aa23.88■■□□□ 1.41
PTPN6-217ENST00000542462 ARHGEF28Q8N1W1 1705 aaKnown RBP23.87■■□□□ 1.41
PTPN6-217ENST00000542462 KIAA1210Q9ULL0 1709 aa23.87■■□□□ 1.41
PTPN6-217ENST00000542462 LMOD2Q6P5Q4 547 aa23.87■■□□□ 1.41
PTPN6-217ENST00000542462 EIF3AQ14152 1382 aaKnown RBP23.87■■□□□ 1.41
PTPN6-217ENST00000542462 TNS3Q68CZ2 1445 aa23.85■■□□□ 1.41
PTPN6-217ENST00000542462 NGDNQ8NEJ9 315 aaKnown RBP23.85■■□□□ 1.41
PTPN6-217ENST00000542462 CENPJQ9HC77 1338 aaPredicted RBP23.84■■□□□ 1.41
PTPN6-217ENST00000542462 RBM6P78332 1123 aaKnown RBP23.83■■□□□ 1.41
PTPN6-217ENST00000542462 ATP7BP35670 1465 aa23.81■■□□□ 1.4
PTPN6-217ENST00000542462 GPRASP1Q5JY77 1395 aa23.81■■□□□ 1.4
PTPN6-217ENST00000542462 CCDC61Q9Y6R9 512 aa23.81■■□□□ 1.4
PTPN6-217ENST00000542462 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
PTPN6-217ENST00000542462 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
PTPN6-217ENST00000542462 TRPC5Q9UL62 973 aaPredicted RBP23.8■■□□□ 1.4
PTPN6-217ENST00000542462 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
PTPN6-217ENST00000542462 ROCK2O75116 1388 aaKnown RBP23.78■■□□□ 1.4
PTPN6-217ENST00000542462 PLEKHG3A1L390 1219 aa23.78■■□□□ 1.4
PTPN6-217ENST00000542462 PAK3O75914 559 aaPredicted RBP23.78■■□□□ 1.4
PTPN6-217ENST00000542462 HAP1P54257 671 aaPredicted RBP23.77■■□□□ 1.4
PTPN6-217ENST00000542462 SRPK2P78362 688 aaKnown RBP23.77■■□□□ 1.4
PTPN6-217ENST00000542462 ACEP12821 1306 aa23.77■■□□□ 1.4
PTPN6-217ENST00000542462 ATRNO75882 1429 aa23.76■■□□□ 1.39
PTPN6-217ENST00000542462 FAM83GA6ND36 823 aa23.76■■□□□ 1.39
PTPN6-217ENST00000542462 CDK12Q9NYV4 1490 aaPredicted RBP23.75■■□□□ 1.39
PTPN6-217ENST00000542462 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
PTPN6-217ENST00000542462 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
PTPN6-217ENST00000542462 RGS12O14924 1447 aa23.74■■□□□ 1.39
PTPN6-217ENST00000542462 TRPM1Q7Z4N2 1603 aa23.73■■□□□ 1.39
PTPN6-217ENST00000542462 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
PTPN6-217ENST00000542462 TRPM3Q9HCF6 1732 aaPredicted RBP23.73■■□□□ 1.39
PTPN6-217ENST00000542462 UPF1Q92900 1129 aaKnown RBP eCLIP23.72■■□□□ 1.39
PTPN6-217ENST00000542462 SLIT2O94813 1529 aa23.72■■□□□ 1.39
PTPN6-217ENST00000542462 NUTM2GQ5VZR2 741 aa23.71■■□□□ 1.39
PTPN6-217ENST00000542462 GJD4Q96KN9 370 aaPredicted RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms