RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 LRRC59Q96AG4 307 aaKnown RBP24.03■■□□□ 1.44
CCND1-205ENST00000542367 PLEKHH1Q9ULM0 1364 aa24.03■■□□□ 1.44
CCND1-205ENST00000542367 DHX57Q6P158 1386 aaKnown RBP24.02■■□□□ 1.44
CCND1-205ENST00000542367 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
CCND1-205ENST00000542367 KNDC1Q76NI1 1749 aa24.01■■□□□ 1.43
CCND1-205ENST00000542367 POTEAQ6S8J7 498 aa24.01■■□□□ 1.43
CCND1-205ENST00000542367 SIRT1Q96EB6 747 aa24.01■■□□□ 1.43
CCND1-205ENST00000542367 LRP6O75581 1613 aa23.99■■□□□ 1.43
CCND1-205ENST00000542367 LAMC1P11047 1609 aa23.99■■□□□ 1.43
CCND1-205ENST00000542367 NUTM2BA6NNL0 878 aaPredicted RBP23.99■■□□□ 1.43
CCND1-205ENST00000542367 NUTM2EB1AL46 878 aaPredicted RBP23.99■■□□□ 1.43
CCND1-205ENST00000542367 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
CCND1-205ENST00000542367 NUTM2AQ8IVF1 878 aaPredicted RBP23.99■■□□□ 1.43
CCND1-205ENST00000542367 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
CCND1-205ENST00000542367 CDC42BPGQ6DT37 1551 aa23.98■■□□□ 1.43
CCND1-205ENST00000542367 NUTM2FA1L443 756 aa23.97■■□□□ 1.43
CCND1-205ENST00000542367 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
CCND1-205ENST00000542367 SOS2Q07890 1332 aaPredicted RBP23.94■■□□□ 1.42
CCND1-205ENST00000542367 PRAM1Q96QH2 718 aa23.94■■□□□ 1.42
CCND1-205ENST00000542367 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
CCND1-205ENST00000542367 SAFB2Q14151 953 aaKnown RBP eCLIP23.92■■□□□ 1.42
CCND1-205ENST00000542367 POGKQ9P215 609 aa23.91■■□□□ 1.42
CCND1-205ENST00000542367 FOXO3O43524 673 aa23.9■■□□□ 1.42
CCND1-205ENST00000542367 TRAK1Q9UPV9 953 aa23.9■■□□□ 1.42
CCND1-205ENST00000542367 ADGRB1O14514 1584 aa23.9■■□□□ 1.42
CCND1-205ENST00000542367 NPHP3Q7Z494 1330 aa23.89■■□□□ 1.42
CCND1-205ENST00000542367 ZNF772Q68DY9 489 aaPredicted RBP23.88■■□□□ 1.41
CCND1-205ENST00000542367 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
CCND1-205ENST00000542367 DLC1Q96QB1 1528 aa23.87■■□□□ 1.41
CCND1-205ENST00000542367 XPCQ01831 940 aaPredicted RBP23.86■■□□□ 1.41
CCND1-205ENST00000542367 AFF2P51816 1311 aa23.83■■□□□ 1.4
CCND1-205ENST00000542367 PXDNQ92626 1479 aa23.82■■□□□ 1.4
CCND1-205ENST00000542367 ADAMTS2O95450 1211 aa23.82■■□□□ 1.4
CCND1-205ENST00000542367 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
CCND1-205ENST00000542367 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
CCND1-205ENST00000542367 HIRIP3Q9BW71 556 aaPredicted RBP23.8■■□□□ 1.4
CCND1-205ENST00000542367 PHF8Q9UPP1 1060 aa23.8■■□□□ 1.4
CCND1-205ENST00000542367 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
CCND1-205ENST00000542367 KRT28Q7Z3Y7 464 aa23.78■■□□□ 1.4
CCND1-205ENST00000542367 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
CCND1-205ENST00000542367 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
CCND1-205ENST00000542367 SIN3AQ96ST3 1273 aa23.76■■□□□ 1.39
CCND1-205ENST00000542367 COL22A1Q8NFW1 1626 aaPredicted RBP23.75■■□□□ 1.39
CCND1-205ENST00000542367 RXRBP28702 533 aa23.75■■□□□ 1.39
CCND1-205ENST00000542367 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
CCND1-205ENST00000542367 PMFBP1Q8TBY8 1022 aa23.74■■□□□ 1.39
CCND1-205ENST00000542367 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
CCND1-205ENST00000542367 WASLO00401 505 aaPredicted RBP23.73■■□□□ 1.39
CCND1-205ENST00000542367 PSME1Q06323 249 aa23.73■■□□□ 1.39
CCND1-205ENST00000542367 NBPF1Q3BBV0 1214 aa23.73■■□□□ 1.39
CCND1-205ENST00000542367 QTRT2Q9H974 415 aaKnown RBP23.73■■□□□ 1.39
CCND1-205ENST00000542367 ANKARQ7Z5J8 1434 aa23.73■■□□□ 1.39
CCND1-205ENST00000542367 L3MBTL2Q969R5 705 aa23.72■■□□□ 1.39
CCND1-205ENST00000542367 KIAA1210Q9ULL0 1709 aa23.71■■□□□ 1.39
CCND1-205ENST00000542367 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
CCND1-205ENST00000542367 NEUROD1Q13562 356 aa23.71■■□□□ 1.39
CCND1-205ENST00000542367 ARHGEF28Q8N1W1 1705 aaKnown RBP23.7■■□□□ 1.39
CCND1-205ENST00000542367 EIF3AQ14152 1382 aaKnown RBP23.69■■□□□ 1.38
CCND1-205ENST00000542367 PRR36Q9H6K5 1346 aa23.69■■□□□ 1.38
CCND1-205ENST00000542367 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
CCND1-205ENST00000542367 USP21Q9UK80 565 aa23.68■■□□□ 1.38
CCND1-205ENST00000542367 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
CCND1-205ENST00000542367 RBM6P78332 1123 aaKnown RBP23.66■■□□□ 1.38
CCND1-205ENST00000542367 LMOD2Q6P5Q4 547 aa23.65■■□□□ 1.38
CCND1-205ENST00000542367 TNS3Q68CZ2 1445 aa23.65■■□□□ 1.38
CCND1-205ENST00000542367 SBNO1A3KN83 1393 aa23.65■■□□□ 1.38
CCND1-205ENST00000542367 TRIM26Q12899 539 aaPredicted RBP23.64■■□□□ 1.37
CCND1-205ENST00000542367 CDK19Q9BWU1 502 aa23.64■■□□□ 1.37
CCND1-205ENST00000542367 NUDT16Q96DE0 195 aaKnown RBP23.63■■□□□ 1.37
CCND1-205ENST00000542367 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
CCND1-205ENST00000542367 PLEKHG5O94827 1062 aa23.62■■□□□ 1.37
CCND1-205ENST00000542367 NGDNQ8NEJ9 315 aaKnown RBP23.62■■□□□ 1.37
CCND1-205ENST00000542367 CABLES1Q8TDN4 633 aa23.62■■□□□ 1.37
CCND1-205ENST00000542367 TRPC5Q9UL62 973 aaPredicted RBP23.62■■□□□ 1.37
CCND1-205ENST00000542367 HAP1P54257 671 aaPredicted RBP23.61■■□□□ 1.37
CCND1-205ENST00000542367 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
CCND1-205ENST00000542367 MARF1Q9Y4F3 1742 aaKnown RBP23.61■■□□□ 1.37
CCND1-205ENST00000542367 ARHGEF10O15013 1369 aa23.6■■□□□ 1.37
CCND1-205ENST00000542367 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.36
CCND1-205ENST00000542367 ATP7BP35670 1465 aa23.57■■□□□ 1.36
CCND1-205ENST00000542367 BCL9LQ86UU0 1499 aa23.57■■□□□ 1.36
CCND1-205ENST00000542367 RGS12O14924 1447 aa23.56■■□□□ 1.36
CCND1-205ENST00000542367 ATRNO75882 1429 aa23.56■■□□□ 1.36
CCND1-205ENST00000542367 TRPM3Q9HCF6 1732 aaPredicted RBP23.56■■□□□ 1.36
CCND1-205ENST00000542367 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
CCND1-205ENST00000542367 PAK3O75914 559 aaPredicted RBP23.54■■□□□ 1.36
CCND1-205ENST00000542367 ITSN1Q15811 1721 aa23.53■■□□□ 1.36
CCND1-205ENST00000542367 TRPM1Q7Z4N2 1603 aa23.53■■□□□ 1.36
CCND1-205ENST00000542367 UNC5CLQ8IV45 518 aa23.53■■□□□ 1.36
CCND1-205ENST00000542367 UPF1Q92900 1129 aaKnown RBP eCLIP23.53■■□□□ 1.36
CCND1-205ENST00000542367 SRPK2P78362 688 aaKnown RBP23.52■■□□□ 1.36
CCND1-205ENST00000542367 SLIT2O94813 1529 aa23.52■■□□□ 1.36
CCND1-205ENST00000542367 NBPF8Q3BBV2 869 aa23.51■■□□□ 1.35
CCND1-205ENST00000542367 ACEP12821 1306 aa23.51■■□□□ 1.35
CCND1-205ENST00000542367 ROCK2O75116 1388 aaKnown RBP23.51■■□□□ 1.35
CCND1-205ENST00000542367 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
CCND1-205ENST00000542367 PLEKHG3A1L390 1219 aa23.5■■□□□ 1.35
CCND1-205ENST00000542367 GJD4Q96KN9 370 aaPredicted RBP23.5■■□□□ 1.35
CCND1-205ENST00000542367 CABP2Q9NPB3 220 aa23.5■■□□□ 1.35
CCND1-205ENST00000542367 ABCA3Q99758 1704 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms