RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
NPIPB4-215ENST00000542133 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
NPIPB4-215ENST00000542133 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
NPIPB4-215ENST00000542133 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
NPIPB4-215ENST00000542133 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
NPIPB4-215ENST00000542133 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
NPIPB4-215ENST00000542133 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPIPB4-215ENST00000542133 USP21Q9UK80 565 aa12.1□□□□□ -0.47
NPIPB4-215ENST00000542133 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
NPIPB4-215ENST00000542133 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
NPIPB4-215ENST00000542133 COL22A1Q8NFW1 1626 aaPredicted RBP12.09□□□□□ -0.47
NPIPB4-215ENST00000542133 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
NPIPB4-215ENST00000542133 ANKRD30AQ9BXX3 1397 aa12.08□□□□□ -0.48
NPIPB4-215ENST00000542133 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
NPIPB4-215ENST00000542133 BLMP54132 1417 aaPredicted RBP12.07□□□□□ -0.48
NPIPB4-215ENST00000542133 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
NPIPB4-215ENST00000542133 VPS8Q8N3P4 1428 aa12.06□□□□□ -0.48
NPIPB4-215ENST00000542133 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
NPIPB4-215ENST00000542133 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 MYOM2P54296 1465 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 C1orf167Q5SNV9 1468 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 BCL9LQ86UU0 1499 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 E9PCH4 1651 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 SPHKAPQ2M3C7 1700 aa12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NPIPB4-215ENST00000542133 ZBTB22O15209 634 aa12.04□□□□□ -0.48
NPIPB4-215ENST00000542133 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
NPIPB4-215ENST00000542133 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
NPIPB4-215ENST00000542133 IQGAP3Q86VI3 1631 aa12.04□□□□□ -0.48
NPIPB4-215ENST00000542133 GLI3P10071 1580 aa12.03□□□□□ -0.48
NPIPB4-215ENST00000542133 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
NPIPB4-215ENST00000542133 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
NPIPB4-215ENST00000542133 BRWD3Q6RI45 1802 aa12.01□□□□□ -0.49
NPIPB4-215ENST00000542133 METP08581 1390 aa12.01□□□□□ -0.49
NPIPB4-215ENST00000542133 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
NPIPB4-215ENST00000542133 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
NPIPB4-215ENST00000542133 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
NPIPB4-215ENST00000542133 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
NPIPB4-215ENST00000542133 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
NPIPB4-215ENST00000542133 SLIT2O94813 1529 aa11.96□□□□□ -0.49
NPIPB4-215ENST00000542133 PXDNQ92626 1479 aa11.96□□□□□ -0.49
NPIPB4-215ENST00000542133 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
NPIPB4-215ENST00000542133 HRCP23327 699 aa11.96□□□□□ -0.49
NPIPB4-215ENST00000542133 POTEHQ6S545 545 aa11.96□□□□□ -0.49
NPIPB4-215ENST00000542133 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
NPIPB4-215ENST00000542133 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
NPIPB4-215ENST00000542133 NEXMIFQ5QGS0 1516 aa11.93□□□□□ -0.5
NPIPB4-215ENST00000542133 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
NPIPB4-215ENST00000542133 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
NPIPB4-215ENST00000542133 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
NPIPB4-215ENST00000542133 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
NPIPB4-215ENST00000542133 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
NPIPB4-215ENST00000542133 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
NPIPB4-215ENST00000542133 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
NPIPB4-215ENST00000542133 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
NPIPB4-215ENST00000542133 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
NPIPB4-215ENST00000542133 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
NPIPB4-215ENST00000542133 YY1P25490 414 aa11.88□□□□□ -0.51
NPIPB4-215ENST00000542133 BAG6P46379 1132 aa11.88□□□□□ -0.51
NPIPB4-215ENST00000542133 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
NPIPB4-215ENST00000542133 HFM1A2PYH4 1435 aa11.87□□□□□ -0.51
NPIPB4-215ENST00000542133 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
NPIPB4-215ENST00000542133 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
NPIPB4-215ENST00000542133 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
NPIPB4-215ENST00000542133 R3HDM1Q15032 1099 aaKnown RBP11.85□□□□□ -0.51
NPIPB4-215ENST00000542133 VPS72Q15906 364 aa11.85□□□□□ -0.51
NPIPB4-215ENST00000542133 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
NPIPB4-215ENST00000542133 DISP2A7MBM2 1401 aa11.85□□□□□ -0.51
NPIPB4-215ENST00000542133 FOXO3O43524 673 aa11.84□□□□□ -0.51
NPIPB4-215ENST00000542133 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
NPIPB4-215ENST00000542133 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
NPIPB4-215ENST00000542133 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
NPIPB4-215ENST00000542133 NUP155O75694 1391 aa11.83□□□□□ -0.52
NPIPB4-215ENST00000542133 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-215ENST00000542133 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-215ENST00000542133 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
NPIPB4-215ENST00000542133 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
NPIPB4-215ENST00000542133 ADGRB2O60241 1585 aa11.82□□□□□ -0.52
NPIPB4-215ENST00000542133 KIF1BO60333 1816 aa11.81□□□□□ -0.52
NPIPB4-215ENST00000542133 CCDC144AA2RUR9 1427 aa11.81□□□□□ -0.52
NPIPB4-215ENST00000542133 ROCK1Q13464 1354 aa11.8□□□□□ -0.52
NPIPB4-215ENST00000542133 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
NPIPB4-215ENST00000542133 NAIPQ13075 1403 aa11.8□□□□□ -0.52
NPIPB4-215ENST00000542133 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
NPIPB4-215ENST00000542133 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
NPIPB4-215ENST00000542133 THSD7AQ9UPZ6 1657 aa11.79□□□□□ -0.52
NPIPB4-215ENST00000542133 RREB1Q92766 1687 aa11.78□□□□□ -0.52
NPIPB4-215ENST00000542133 A0A0G2JS52 829 aa11.78□□□□□ -0.52
NPIPB4-215ENST00000542133 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.53
NPIPB4-215ENST00000542133 PPLO60437 1756 aa11.77□□□□□ -0.53
NPIPB4-215ENST00000542133 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
NPIPB4-215ENST00000542133 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms