RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 C8orf34Q49A92 452 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 ZNF518AQ6AHZ1 1483 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 MYOM2P54296 1465 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 IDI1Q13907 227 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 MROH1Q8NDA8 1641 aa12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
CX3CR1-206ENST00000542107 MYOM1P52179 1685 aa12.97□□□□□ -0.33
CX3CR1-206ENST00000542107 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
CX3CR1-206ENST00000542107 MINK1Q8N4C8 1332 aaPredicted RBP12.97□□□□□ -0.33
CX3CR1-206ENST00000542107 EFCAB6Q5THR3 1501 aa12.97□□□□□ -0.33
CX3CR1-206ENST00000542107 POLR3AO14802 1390 aaPredicted RBP12.97□□□□□ -0.33
CX3CR1-206ENST00000542107 PPRC1Q5VV67 1664 aaKnown RBP12.96□□□□□ -0.33
CX3CR1-206ENST00000542107 POGKQ9P215 609 aa12.96□□□□□ -0.34
CX3CR1-206ENST00000542107 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 RARSP54136 660 aaKnown RBP12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 KIF1BO60333 1816 aa12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 KIDINS220Q9ULH0 1771 aa12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 TSR2Q969E8 191 aaKnown RBP12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 STAG3Q9UJ98 1225 aa12.95□□□□□ -0.34
CX3CR1-206ENST00000542107 RLBP1P12271 317 aa12.94□□□□□ -0.34
CX3CR1-206ENST00000542107 MROH2AA6NES4 1674 aa12.94□□□□□ -0.34
CX3CR1-206ENST00000542107 PDE3AQ14432 1141 aa12.94□□□□□ -0.34
CX3CR1-206ENST00000542107 FBXO31Q5XUX0 539 aaPredicted RBP12.93□□□□□ -0.34
CX3CR1-206ENST00000542107 RPGRIP1LQ68CZ1 1315 aa12.93□□□□□ -0.34
CX3CR1-206ENST00000542107 NGEFQ8N5V2 710 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 FBLN1P23142 703 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 POGZQ7Z3K3 1410 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
CX3CR1-206ENST00000542107 SEC24BO95487 1268 aa12.91□□□□□ -0.34
CX3CR1-206ENST00000542107 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 MLECQ14165 292 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 NFKBIBQ15653 356 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 FTSJ3Q8IY81 847 aaKnown RBP12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 ADGRB3O60242 1522 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 NRXN1Q9ULB1 1477 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 WDR63Q8IWG1 891 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 MYH16Q9H6N6 1097 aa12.9□□□□□ -0.34
CX3CR1-206ENST00000542107 CYB5RLQ6IPT4 315 aa12.89□□□□□ -0.35
CX3CR1-206ENST00000542107 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
CX3CR1-206ENST00000542107 MAPK8IP3Q9UPT6 1336 aa12.89□□□□□ -0.35
CX3CR1-206ENST00000542107 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
CX3CR1-206ENST00000542107 RTN4Q9NQC3 1192 aaKnown RBP12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 CABP1Q9NZU7 370 aa12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 MLH3Q9UHC1 1453 aa12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
CX3CR1-206ENST00000542107 FYB1O15117 783 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 LMTK2Q8IWU2 1503 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 A0A1W2PP64 1363 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 ADGRB1O14514 1584 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 ABCC3O15438 1527 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 TMPOP42166 694 aaKnown RBP12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 RIPK4P57078 832 aa12.86□□□□□ -0.35
CX3CR1-206ENST00000542107 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 SLC52A1Q9NWF4 448 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 ITPRIPQ8IWB1 547 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 SLKQ9H2G2 1235 aaPredicted RBP12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 YEATS2Q9ULM3 1422 aa12.85□□□□□ -0.35
CX3CR1-206ENST00000542107 FRAT2O75474 233 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 QRICH2Q9H0J4 1663 aa12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 NEURL4Q96JN8 1562 aa12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
CX3CR1-206ENST00000542107 SPRYD3Q8NCJ5 442 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 IFT172Q9UG01 1749 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 HMOX1P09601 288 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 CCDC27Q2M243 656 aa12.83□□□□□ -0.36
CX3CR1-206ENST00000542107 TULP4Q9NRJ4 1543 aa12.82□□□□□ -0.36
CX3CR1-206ENST00000542107 NOB1Q9ULX3 412 aaKnown RBP12.82□□□□□ -0.36
CX3CR1-206ENST00000542107 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
CX3CR1-206ENST00000542107 HECW2Q9P2P5 1572 aa12.82□□□□□ -0.36
CX3CR1-206ENST00000542107 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 USP19O94966 1318 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 GLI2P10070 1586 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 THUMPD2Q9BTF0 503 aaKnown RBP12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 UPF2Q9HAU5 1272 aaKnown RBP12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 TRIM27P14373 513 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
CX3CR1-206ENST00000542107 PPLO60437 1756 aa12.8□□□□□ -0.36
CX3CR1-206ENST00000542107 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms