RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
THBS3-211ENST00000541990 TNRQ92752 1358 aa11.95□□□□□ -0.5
THBS3-211ENST00000541990 KIF1BO60333 1816 aa11.95□□□□□ -0.5
THBS3-211ENST00000541990 POGKQ9P215 609 aa11.95□□□□□ -0.5
THBS3-211ENST00000541990 CENPJQ9HC77 1338 aaPredicted RBP11.95□□□□□ -0.5
THBS3-211ENST00000541990 PIK3C2BO00750 1634 aa11.94□□□□□ -0.5
THBS3-211ENST00000541990 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
THBS3-211ENST00000541990 PLEKHH1Q9ULM0 1364 aa11.94□□□□□ -0.5
THBS3-211ENST00000541990 PREX1Q8TCU6 1659 aa11.93□□□□□ -0.5
THBS3-211ENST00000541990 FRAT2O75474 233 aaPredicted RBP11.93□□□□□ -0.5
THBS3-211ENST00000541990 RALBP1Q15311 655 aa11.93□□□□□ -0.5
THBS3-211ENST00000541990 SCAF11Q99590 1463 aaKnown RBP11.93□□□□□ -0.5
THBS3-211ENST00000541990 AGLP35573 1532 aa11.93□□□□□ -0.5
THBS3-211ENST00000541990 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
THBS3-211ENST00000541990 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
THBS3-211ENST00000541990 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
THBS3-211ENST00000541990 RIMS2Q9UQ26 1411 aa11.92□□□□□ -0.5
THBS3-211ENST00000541990 A2ML1A8K2U0 1454 aa11.92□□□□□ -0.5
THBS3-211ENST00000541990 METP08581 1390 aa11.92□□□□□ -0.5
THBS3-211ENST00000541990 NLRP13Q86W25 1043 aa11.92□□□□□ -0.5
THBS3-211ENST00000541990 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
THBS3-211ENST00000541990 NEXMIFQ5QGS0 1516 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 FBLN1P23142 703 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 PPP6R1Q9UPN7 881 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 KDM2BQ8NHM5 1336 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 PARD3Q8TEW0 1356 aa11.91□□□□□ -0.5
THBS3-211ENST00000541990 UBE2Q2Q8WVN8 375 aa11.9□□□□□ -0.5
THBS3-211ENST00000541990 PDE3BQ13370 1112 aa11.9□□□□□ -0.51
THBS3-211ENST00000541990 KTN1Q86UP2 1357 aaKnown RBP11.89□□□□□ -0.51
THBS3-211ENST00000541990 PLEKHG5O94827 1062 aa11.89□□□□□ -0.51
THBS3-211ENST00000541990 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
THBS3-211ENST00000541990 MYOM2P54296 1465 aa11.88□□□□□ -0.51
THBS3-211ENST00000541990 RGS3P49796 1198 aa11.88□□□□□ -0.51
THBS3-211ENST00000541990 HSPA2P54652 639 aa11.88□□□□□ -0.51
THBS3-211ENST00000541990 KNSTRNQ9Y448 316 aa11.88□□□□□ -0.51
THBS3-211ENST00000541990 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 PPLO60437 1756 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 ADGRB1O14514 1584 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 BLMP54132 1417 aaPredicted RBP11.86□□□□□ -0.51
THBS3-211ENST00000541990 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 CDK19Q9BWU1 502 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
THBS3-211ENST00000541990 TMEM2Q9UHN6 1383 aa11.86□□□□□ -0.51
THBS3-211ENST00000541990 REREQ9P2R6 1566 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 FAM161AQ3B820 660 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 ASXL1Q8IXJ9 1541 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 EIF3AQ14152 1382 aaKnown RBP11.85□□□□□ -0.51
THBS3-211ENST00000541990 PTPRMP28827 1452 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 SPATA31D1Q6ZQQ2 1576 aa11.85□□□□□ -0.51
THBS3-211ENST00000541990 YTHDC2Q9H6S0 1430 aaKnown RBP11.84□□□□□ -0.51
THBS3-211ENST00000541990 SLC24A1O60721 1099 aa11.84□□□□□ -0.51
THBS3-211ENST00000541990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.84□□□□□ -0.51
THBS3-211ENST00000541990 ZC3H13Q5T200 1668 aaKnown RBP11.84□□□□□ -0.51
THBS3-211ENST00000541990 AMER1Q5JTC6 1135 aaPredicted RBP11.83□□□□□ -0.52
THBS3-211ENST00000541990 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
THBS3-211ENST00000541990 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
THBS3-211ENST00000541990 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
THBS3-211ENST00000541990 IFT172Q9UG01 1749 aa11.82□□□□□ -0.52
THBS3-211ENST00000541990 CENPQQ7L2Z9 268 aaPredicted RBP11.82□□□□□ -0.52
THBS3-211ENST00000541990 ZRANB1Q9UGI0 708 aa11.82□□□□□ -0.52
THBS3-211ENST00000541990 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
THBS3-211ENST00000541990 ZFYVE9O95405 1425 aa11.82□□□□□ -0.52
THBS3-211ENST00000541990 SOX12O15370 315 aa11.82□□□□□ -0.52
THBS3-211ENST00000541990 ALKQ9UM73 1620 aa11.81□□□□□ -0.52
THBS3-211ENST00000541990 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
THBS3-211ENST00000541990 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
THBS3-211ENST00000541990 THEMISQ8N1K5 641 aaPredicted RBP11.81□□□□□ -0.52
THBS3-211ENST00000541990 EVC2Q86UK5 1308 aa11.81□□□□□ -0.52
THBS3-211ENST00000541990 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
THBS3-211ENST00000541990 RRAGDQ9NQL2 400 aaPredicted RBP11.8□□□□□ -0.52
THBS3-211ENST00000541990 SEC24BO95487 1268 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 KCNA6P17658 529 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 PMFBP1Q8TBY8 1022 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 ARXQ96QS3 562 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 USP19O94966 1318 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
THBS3-211ENST00000541990 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
THBS3-211ENST00000541990 CCDC146Q8IYE0 955 aa11.79□□□□□ -0.52
THBS3-211ENST00000541990 C3P01024 1663 aa11.79□□□□□ -0.52
THBS3-211ENST00000541990 RIMS1Q86UR5 1692 aaKnown RBP11.79□□□□□ -0.52
THBS3-211ENST00000541990 FAM43AQ8N2R8 423 aa11.79□□□□□ -0.52
THBS3-211ENST00000541990 PPP2R1AP30153 589 aa11.78□□□□□ -0.52
THBS3-211ENST00000541990 SLKQ9H2G2 1235 aaPredicted RBP11.78□□□□□ -0.52
THBS3-211ENST00000541990 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
THBS3-211ENST00000541990 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
THBS3-211ENST00000541990 FER1L4A9Z1Z3 1794 aa11.78□□□□□ -0.52
THBS3-211ENST00000541990 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.52
THBS3-211ENST00000541990 ADAMTS13Q76LX8 1427 aa11.77□□□□□ -0.53
THBS3-211ENST00000541990 PTPRUQ92729 1446 aa11.77□□□□□ -0.53
THBS3-211ENST00000541990 IGHDP01880 384 aa11.76□□□□□ -0.53
THBS3-211ENST00000541990 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
THBS3-211ENST00000541990 TULP4Q9NRJ4 1543 aa11.76□□□□□ -0.53
THBS3-211ENST00000541990 NUTM2GQ5VZR2 741 aa11.76□□□□□ -0.53
THBS3-211ENST00000541990 BCAR3O75815 825 aa11.76□□□□□ -0.53
THBS3-211ENST00000541990 MORC1Q86VD1 984 aa11.76□□□□□ -0.53
THBS3-211ENST00000541990 PRR36Q9H6K5 1346 aa11.75□□□□□ -0.53
THBS3-211ENST00000541990 ZNF521Q96K83 1311 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms