RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 POGKQ9P215 609 aa19.13■□□□□ 0.65
SFSWAP-210ENST00000541286 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
SFSWAP-210ENST00000541286 KCNA6P17658 529 aa19.12■□□□□ 0.65
SFSWAP-210ENST00000541286 EIF5BO60841 1220 aaKnown RBP19.12■□□□□ 0.65
SFSWAP-210ENST00000541286 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
SFSWAP-210ENST00000541286 NRXN3Q9Y4C0 1643 aa19.11■□□□□ 0.65
SFSWAP-210ENST00000541286 AMOTL2Q9Y2J4 779 aa19.11■□□□□ 0.65
SFSWAP-210ENST00000541286 ADGRB1O14514 1584 aa19.11■□□□□ 0.65
SFSWAP-210ENST00000541286 ZBTB47Q9UFB7 747 aaPredicted RBP19.11■□□□□ 0.65
SFSWAP-210ENST00000541286 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.1■□□□□ 0.65
SFSWAP-210ENST00000541286 PTPRUQ92729 1446 aa19.1■□□□□ 0.65
SFSWAP-210ENST00000541286 SCAF11Q99590 1463 aaKnown RBP19.09■□□□□ 0.65
SFSWAP-210ENST00000541286 GPRASP1Q5JY77 1395 aa19.09■□□□□ 0.65
SFSWAP-210ENST00000541286 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.65
SFSWAP-210ENST00000541286 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
SFSWAP-210ENST00000541286 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
SFSWAP-210ENST00000541286 CENPJQ9HC77 1338 aaPredicted RBP19.07■□□□□ 0.64
SFSWAP-210ENST00000541286 ANP32AP39687 249 aaKnown RBP19.07■□□□□ 0.64
SFSWAP-210ENST00000541286 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
SFSWAP-210ENST00000541286 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
SFSWAP-210ENST00000541286 PLEKHG1Q9ULL1 1385 aa19.04■□□□□ 0.64
SFSWAP-210ENST00000541286 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
SFSWAP-210ENST00000541286 SLIT1O75093 1534 aa19.03■□□□□ 0.64
SFSWAP-210ENST00000541286 SRPK2P78362 688 aaKnown RBP19.03■□□□□ 0.64
SFSWAP-210ENST00000541286 SLC12A5Q9H2X9 1139 aa19.03■□□□□ 0.64
SFSWAP-210ENST00000541286 NEURL4Q96JN8 1562 aa19.02■□□□□ 0.63
SFSWAP-210ENST00000541286 NUDCQ9Y266 331 aa19.02■□□□□ 0.63
SFSWAP-210ENST00000541286 ZNF335Q9H4Z2 1342 aaPredicted RBP19.01■□□□□ 0.63
SFSWAP-210ENST00000541286 ERICH6BQ5W0A0 696 aa19.01■□□□□ 0.63
SFSWAP-210ENST00000541286 IPO9Q96P70 1041 aaKnown RBP19.01■□□□□ 0.63
SFSWAP-210ENST00000541286 NPHP4O75161 1426 aaPredicted RBP19■□□□□ 0.63
SFSWAP-210ENST00000541286 C14orf37Q86TY3 774 aa18.99■□□□□ 0.63
SFSWAP-210ENST00000541286 STAC3Q96MF2 364 aa18.99■□□□□ 0.63
SFSWAP-210ENST00000541286 NEFMP07197 916 aa18.99■□□□□ 0.63
SFSWAP-210ENST00000541286 SETD1AO15047 1707 aaKnown RBP18.99■□□□□ 0.63
SFSWAP-210ENST00000541286 TMF1P82094 1093 aa18.98■□□□□ 0.63
SFSWAP-210ENST00000541286 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
SFSWAP-210ENST00000541286 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
SFSWAP-210ENST00000541286 PANK3Q9H999 370 aa18.97■□□□□ 0.63
SFSWAP-210ENST00000541286 ZNF142P52746 1687 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-210ENST00000541286 CC2D1BQ5T0F9 858 aaKnown RBP18.96■□□□□ 0.63
SFSWAP-210ENST00000541286 AEBP2Q6ZN18 517 aaPredicted RBP18.96■□□□□ 0.63
SFSWAP-210ENST00000541286 PNISRQ8TF01 805 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-210ENST00000541286 ARHGEF28Q8N1W1 1705 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-210ENST00000541286 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
SFSWAP-210ENST00000541286 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
SFSWAP-210ENST00000541286 BRPF3Q9ULD4 1205 aa18.95■□□□□ 0.62
SFSWAP-210ENST00000541286 PMFBP1Q8TBY8 1022 aa18.94■□□□□ 0.62
SFSWAP-210ENST00000541286 MED14O60244 1454 aa18.93■□□□□ 0.62
SFSWAP-210ENST00000541286 QRICH2Q9H0J4 1663 aa18.92■□□□□ 0.62
SFSWAP-210ENST00000541286 EIF3AQ14152 1382 aaKnown RBP18.92■□□□□ 0.62
SFSWAP-210ENST00000541286 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-210ENST00000541286 PROSER2Q86WR7 435 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-210ENST00000541286 CABP1Q9NZU7 370 aa18.92■□□□□ 0.62
SFSWAP-210ENST00000541286 FBLN1P23142 703 aa18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 SKAP1Q86WV1 359 aa18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 DDX17Q92841 729 aaKnown RBP18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 ABCC11Q96J66 1382 aa18.91■□□□□ 0.62
SFSWAP-210ENST00000541286 TULP4Q9NRJ4 1543 aa18.9■□□□□ 0.62
SFSWAP-210ENST00000541286 PRR36Q9H6K5 1346 aa18.9■□□□□ 0.62
SFSWAP-210ENST00000541286 KDM5AP29375 1690 aaKnown RBP18.9■□□□□ 0.62
SFSWAP-210ENST00000541286 CARD14Q9BXL6 1004 aa18.89■□□□□ 0.62
SFSWAP-210ENST00000541286 EXOC6Q8TAG9 804 aa18.87■□□□□ 0.61
SFSWAP-210ENST00000541286 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.87■□□□□ 0.61
SFSWAP-210ENST00000541286 SMG6Q86US8 1419 aaKnown RBP18.87■□□□□ 0.61
SFSWAP-210ENST00000541286 SLC4A3P48751 1232 aa18.87■□□□□ 0.61
SFSWAP-210ENST00000541286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.87■□□□□ 0.61
SFSWAP-210ENST00000541286 EVC2Q86UK5 1308 aa18.86■□□□□ 0.61
SFSWAP-210ENST00000541286 WASLO00401 505 aaPredicted RBP18.86■□□□□ 0.61
SFSWAP-210ENST00000541286 POLR1AO95602 1720 aaPredicted RBP18.86■□□□□ 0.61
SFSWAP-210ENST00000541286 PLIN1O60240 522 aa18.85■□□□□ 0.61
SFSWAP-210ENST00000541286 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
SFSWAP-210ENST00000541286 ZRANB1Q9UGI0 708 aa18.85■□□□□ 0.61
SFSWAP-210ENST00000541286 STRCP1A6NGW2 1772 aa18.85■□□□□ 0.61
SFSWAP-210ENST00000541286 LAMC1P11047 1609 aa18.84■□□□□ 0.61
SFSWAP-210ENST00000541286 SOX12O15370 315 aa18.84■□□□□ 0.61
SFSWAP-210ENST00000541286 NUDT16Q96DE0 195 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-210ENST00000541286 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
SFSWAP-210ENST00000541286 NUTM2GQ5VZR2 741 aa18.83■□□□□ 0.61
SFSWAP-210ENST00000541286 ORAI2Q96SN7 254 aa18.83■□□□□ 0.61
SFSWAP-210ENST00000541286 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
SFSWAP-210ENST00000541286 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
SFSWAP-210ENST00000541286 PER1O15534 1290 aaPredicted RBP18.8■□□□□ 0.6
SFSWAP-210ENST00000541286 RALBP1Q15311 655 aa18.79■□□□□ 0.6
SFSWAP-210ENST00000541286 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-210ENST00000541286 GGNBP2Q9H3C7 697 aa18.79■□□□□ 0.6
SFSWAP-210ENST00000541286 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
SFSWAP-210ENST00000541286 ESCO1Q5FWF5 840 aa18.78■□□□□ 0.6
SFSWAP-210ENST00000541286 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-210ENST00000541286 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
SFSWAP-210ENST00000541286 KTN1Q86UP2 1357 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-210ENST00000541286 FOXO3O43524 673 aa18.76■□□□□ 0.59
SFSWAP-210ENST00000541286 A0A1W2PP64 1363 aa18.76■□□□□ 0.59
SFSWAP-210ENST00000541286 TECPR2O15040 1411 aa18.76■□□□□ 0.59
SFSWAP-210ENST00000541286 MYOM1P52179 1685 aa18.75■□□□□ 0.59
SFSWAP-210ENST00000541286 CPS1P31327 1500 aa18.74■□□□□ 0.59
SFSWAP-210ENST00000541286 KNSTRNQ9Y448 316 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms