RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 NALCNQ8IZF0 1738 aa30.42■■■□□ 2.46
FERMT3-204ENST00000540957 PRAM1Q96QH2 718 aa30.42■■■□□ 2.46
FERMT3-204ENST00000540957 POGKQ9P215 609 aa30.42■■■□□ 2.46
FERMT3-204ENST00000540957 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.42■■■□□ 2.46
FERMT3-204ENST00000540957 ILDR1Q86SU0 546 aaPredicted RBP30.41■■■□□ 2.46
FERMT3-204ENST00000540957 SAFB2Q14151 953 aaKnown RBP eCLIP30.37■■■□□ 2.45
FERMT3-204ENST00000540957 RALGAPBQ86X10 1494 aa30.36■■■□□ 2.45
FERMT3-204ENST00000540957 SLAIN2Q9P270 581 aa30.35■■■□□ 2.45
FERMT3-204ENST00000540957 CDC42BPGQ6DT37 1551 aa30.32■■■□□ 2.45
FERMT3-204ENST00000540957 ARHGEF28Q8N1W1 1705 aaKnown RBP30.32■■■□□ 2.44
FERMT3-204ENST00000540957 GPRASP1Q5JY77 1395 aa30.31■■■□□ 2.44
FERMT3-204ENST00000540957 CARD11Q9BXL7 1154 aa30.29■■■□□ 2.44
FERMT3-204ENST00000540957 MST1RQ04912 1400 aa30.29■■■□□ 2.44
FERMT3-204ENST00000540957 EIF3AQ14152 1382 aaKnown RBP30.27■■■□□ 2.44
FERMT3-204ENST00000540957 MINK1Q8N4C8 1332 aaPredicted RBP30.26■■■□□ 2.44
FERMT3-204ENST00000540957 CENPJQ9HC77 1338 aaPredicted RBP30.24■■■□□ 2.43
FERMT3-204ENST00000540957 ROBO1Q9Y6N7 1651 aa30.23■■■□□ 2.43
FERMT3-204ENST00000540957 HIRIP3Q9BW71 556 aaPredicted RBP30.23■■■□□ 2.43
FERMT3-204ENST00000540957 ADGRB2O60241 1585 aa30.23■■■□□ 2.43
FERMT3-204ENST00000540957 C1orf167Q5SNV9 1468 aa30.22■■■□□ 2.43
FERMT3-204ENST00000540957 NUTM2FA1L443 756 aa30.18■■■□□ 2.42
FERMT3-204ENST00000540957 BRINP3Q76B58 766 aa30.18■■■□□ 2.42
FERMT3-204ENST00000540957 FMN2Q9NZ56 1722 aa30.17■■■□□ 2.42
FERMT3-204ENST00000540957 HSPA1LP34931 641 aa30.17■■■□□ 2.42
FERMT3-204ENST00000540957 WASLO00401 505 aaPredicted RBP30.15■■■□□ 2.42
FERMT3-204ENST00000540957 QRICH2Q9H0J4 1663 aa30.14■■■□□ 2.42
FERMT3-204ENST00000540957 ESCO1Q5FWF5 840 aa30.13■■■□□ 2.41
FERMT3-204ENST00000540957 ORAI2Q96SN7 254 aa30.12■■■□□ 2.41
FERMT3-204ENST00000540957 ANKARQ7Z5J8 1434 aa30.11■■■□□ 2.41
FERMT3-204ENST00000540957 TULP4Q9NRJ4 1543 aa30.09■■■□□ 2.41
FERMT3-204ENST00000540957 CDK19Q9BWU1 502 aa30.08■■■□□ 2.41
FERMT3-204ENST00000540957 AHDC1Q5TGY3 1603 aaPredicted RBP30.07■■■□□ 2.4
FERMT3-204ENST00000540957 USP47Q96K76 1375 aa30.06■■■□□ 2.4
FERMT3-204ENST00000540957 SRPK2P78362 688 aaKnown RBP30.05■■■□□ 2.4
FERMT3-204ENST00000540957 EVC2Q86UK5 1308 aa30.04■■■□□ 2.4
FERMT3-204ENST00000540957 PHLPP1O60346 1717 aa30.04■■■□□ 2.4
FERMT3-204ENST00000540957 SBNO2Q9Y2G9 1366 aa30.03■■■□□ 2.4
FERMT3-204ENST00000540957 USP32Q8NFA0 1604 aa30.03■■■□□ 2.4
FERMT3-204ENST00000540957 PRR36Q9H6K5 1346 aa30.02■■■□□ 2.4
FERMT3-204ENST00000540957 NHSL1Q5SYE7 1610 aa30.01■■■□□ 2.39
FERMT3-204ENST00000540957 ST20-MTHFSA0A0A6YYL1 179 aa30.01■■■□□ 2.39
FERMT3-204ENST00000540957 PHF8Q9UPP1 1060 aa30.01■■■□□ 2.39
FERMT3-204ENST00000540957 KIF1AQ12756 1690 aa30.01■■■□□ 2.39
FERMT3-204ENST00000540957 ATP7BP35670 1465 aa30■■■□□ 2.39
FERMT3-204ENST00000540957 DDX17Q92841 729 aaKnown RBP30■■■□□ 2.39
FERMT3-204ENST00000540957 NUDT16Q96DE0 195 aaKnown RBP30■■■□□ 2.39
FERMT3-204ENST00000540957 NPHP3Q7Z494 1330 aa29.99■■■□□ 2.39
FERMT3-204ENST00000540957 COL16A1Q07092 1604 aaPredicted RBP29.98■■■□□ 2.39
FERMT3-204ENST00000540957 FOXO3O43524 673 aa29.98■■■□□ 2.39
FERMT3-204ENST00000540957 CABP2Q9NPB3 220 aa29.98■■■□□ 2.39
FERMT3-204ENST00000540957 RGPD8O14715 1765 aaPredicted RBP29.96■■■□□ 2.39
FERMT3-204ENST00000540957 PMFBP1Q8TBY8 1022 aa29.95■■■□□ 2.39
FERMT3-204ENST00000540957 CCDC61Q9Y6R9 512 aa29.95■■■□□ 2.39
FERMT3-204ENST00000540957 SLC24A1O60721 1099 aa29.94■■■□□ 2.38
FERMT3-204ENST00000540957 ITSN1Q15811 1721 aa29.93■■■□□ 2.38
FERMT3-204ENST00000540957 SOS2Q07890 1332 aaPredicted RBP29.92■■■□□ 2.38
FERMT3-204ENST00000540957 XPCQ01831 940 aaPredicted RBP29.91■■■□□ 2.38
FERMT3-204ENST00000540957 LRRC59Q96AG4 307 aaKnown RBP29.91■■■□□ 2.38
FERMT3-204ENST00000540957 TESK2Q96S53 571 aa29.91■■■□□ 2.38
FERMT3-204ENST00000540957 JCADQ9P266 1359 aa29.9■■■□□ 2.38
FERMT3-204ENST00000540957 EIF4G2P78344 907 aaKnown RBP eCLIP29.9■■■□□ 2.38
FERMT3-204ENST00000540957 NGDNQ8NEJ9 315 aaKnown RBP29.9■■■□□ 2.38
FERMT3-204ENST00000540957 PPIP5K1Q6PFW1 1433 aa29.89■■■□□ 2.38
FERMT3-204ENST00000540957 TOPAZ1Q8N9V7 1692 aa29.89■■■□□ 2.38
FERMT3-204ENST00000540957 PXDNQ92626 1479 aa29.89■■■□□ 2.38
FERMT3-204ENST00000540957 PSME1Q06323 249 aa29.89■■■□□ 2.38
FERMT3-204ENST00000540957 ATAD2Q6PL18 1390 aa29.88■■■□□ 2.37
FERMT3-204ENST00000540957 KRT28Q7Z3Y7 464 aa29.87■■■□□ 2.37
FERMT3-204ENST00000540957 TMF1P82094 1093 aa29.85■■■□□ 2.37
FERMT3-204ENST00000540957 PLEKHG3A1L390 1219 aa29.84■■■□□ 2.37
FERMT3-204ENST00000540957 HSPA5P11021 654 aaKnown RBP29.82■■■□□ 2.36
FERMT3-204ENST00000540957 CABP1Q9NZU7 370 aa29.82■■■□□ 2.36
FERMT3-204ENST00000540957 POLR3AO14802 1390 aaPredicted RBP29.81■■■□□ 2.36
FERMT3-204ENST00000540957 ACEP12821 1306 aa29.81■■■□□ 2.36
FERMT3-204ENST00000540957 DISP3Q9P2K9 1392 aa29.8■■■□□ 2.36
FERMT3-204ENST00000540957 PUS7Q96PZ0 661 aaKnown RBP29.8■■■□□ 2.36
FERMT3-204ENST00000540957 PNPLA6Q8IY17 1366 aa29.79■■■□□ 2.36
FERMT3-204ENST00000540957 SHPRHQ149N8 1683 aa29.79■■■□□ 2.36
FERMT3-204ENST00000540957 SBNO1A3KN83 1393 aa29.78■■■□□ 2.36
FERMT3-204ENST00000540957 CDCA8Q53HL2 280 aa29.78■■■□□ 2.36
FERMT3-204ENST00000540957 SPATA31A6Q5VVP1 1343 aa29.77■■■□□ 2.36
FERMT3-204ENST00000540957 SPATA31A3Q5VYP0 1347 aa29.77■■■□□ 2.36
FERMT3-204ENST00000540957 TNS3Q68CZ2 1445 aa29.77■■■□□ 2.36
FERMT3-204ENST00000540957 TMC1Q8TDI8 760 aa29.76■■■□□ 2.35
FERMT3-204ENST00000540957 PAK3O75914 559 aaPredicted RBP29.74■■■□□ 2.35
FERMT3-204ENST00000540957 LMOD2Q6P5Q4 547 aa29.73■■■□□ 2.35
FERMT3-204ENST00000540957 ARHGEF10O15013 1369 aa29.72■■■□□ 2.35
FERMT3-204ENST00000540957 NINLQ9Y2I6 1382 aa29.71■■■□□ 2.35
FERMT3-204ENST00000540957 TRPM3Q9HCF6 1732 aaPredicted RBP29.71■■■□□ 2.35
FERMT3-204ENST00000540957 MED1Q15648 1581 aaPredicted RBP29.7■■■□□ 2.35
FERMT3-204ENST00000540957 NUTM2BA6NNL0 878 aaPredicted RBP29.7■■■□□ 2.35
FERMT3-204ENST00000540957 NUTM2EB1AL46 878 aaPredicted RBP29.7■■■□□ 2.35
FERMT3-204ENST00000540957 NUTM2AQ8IVF1 878 aaPredicted RBP29.7■■■□□ 2.35
FERMT3-204ENST00000540957 COL22A1Q8NFW1 1626 aaPredicted RBP29.68■■■□□ 2.34
FERMT3-204ENST00000540957 ZNF692Q9BU19 519 aaPredicted RBP29.68■■■□□ 2.34
FERMT3-204ENST00000540957 SLC12A5Q9H2X9 1139 aa29.68■■■□□ 2.34
FERMT3-204ENST00000540957 USP6P35125 1406 aa29.68■■■□□ 2.34
FERMT3-204ENST00000540957 BRD4O60885 1362 aaPredicted RBP29.66■■■□□ 2.34
FERMT3-204ENST00000540957 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
FERMT3-204ENST00000540957 HDGFL2Q7Z4V5 671 aaPredicted RBP29.66■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms