RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 ZSCAN20P17040 1043 aaPredicted RBP12.34□□□□□ -0.43
CLDN2-202ENST00000540876 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
CLDN2-202ENST00000540876 SENP3Q9H4L4 574 aaPredicted RBP12.34□□□□□ -0.43
CLDN2-202ENST00000540876 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
CLDN2-202ENST00000540876 KANK1Q14678 1352 aa12.34□□□□□ -0.43
CLDN2-202ENST00000540876 KDM2BQ8NHM5 1336 aa12.34□□□□□ -0.43
CLDN2-202ENST00000540876 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
CLDN2-202ENST00000540876 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
CLDN2-202ENST00000540876 TERF1P54274 439 aa12.33□□□□□ -0.44
CLDN2-202ENST00000540876 ZSCAN30Q86W11 494 aa12.33□□□□□ -0.44
CLDN2-202ENST00000540876 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
CLDN2-202ENST00000540876 C20orf194Q5TEA3 1177 aa12.32□□□□□ -0.44
CLDN2-202ENST00000540876 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
CLDN2-202ENST00000540876 MROH1Q8NDA8 1641 aa12.32□□□□□ -0.44
CLDN2-202ENST00000540876 USP19O94966 1318 aa12.31□□□□□ -0.44
CLDN2-202ENST00000540876 ANKRD30BQ9BXX2 1392 aa12.3□□□□□ -0.44
CLDN2-202ENST00000540876 SEC24BO95487 1268 aa12.3□□□□□ -0.44
CLDN2-202ENST00000540876 CDK11BP21127 795 aaKnown RBP12.3□□□□□ -0.44
CLDN2-202ENST00000540876 FTSJ3Q8IY81 847 aaKnown RBP12.3□□□□□ -0.44
CLDN2-202ENST00000540876 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
CLDN2-202ENST00000540876 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
CLDN2-202ENST00000540876 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
CLDN2-202ENST00000540876 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
CLDN2-202ENST00000540876 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
CLDN2-202ENST00000540876 KDM2AQ9Y2K7 1162 aa12.29□□□□□ -0.44
CLDN2-202ENST00000540876 UNC13BO14795 1591 aa12.29□□□□□ -0.44
CLDN2-202ENST00000540876 KIF20AO95235 890 aa12.28□□□□□ -0.44
CLDN2-202ENST00000540876 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
CLDN2-202ENST00000540876 ISY1Q9ULR0 285 aaKnown RBP12.28□□□□□ -0.44
CLDN2-202ENST00000540876 PLA2R1Q13018 1463 aa12.28□□□□□ -0.44
CLDN2-202ENST00000540876 ZFP91Q96JP5 570 aaPredicted RBP12.28□□□□□ -0.44
CLDN2-202ENST00000540876 NPATQ14207 1427 aa12.28□□□□□ -0.44
CLDN2-202ENST00000540876 ZBTB22O15209 634 aa12.27□□□□□ -0.44
CLDN2-202ENST00000540876 CBX1P83916 185 aa12.27□□□□□ -0.45
CLDN2-202ENST00000540876 TBC1D2Q9BYX2 928 aa12.27□□□□□ -0.45
CLDN2-202ENST00000540876 ABCC3O15438 1527 aa12.27□□□□□ -0.45
CLDN2-202ENST00000540876 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
CLDN2-202ENST00000540876 DYNC1I1O14576 645 aa12.27□□□□□ -0.45
CLDN2-202ENST00000540876 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
CLDN2-202ENST00000540876 CCDC173Q0VFZ6 552 aa12.26□□□□□ -0.45
CLDN2-202ENST00000540876 PDE3BQ13370 1112 aa12.26□□□□□ -0.45
CLDN2-202ENST00000540876 DNTTIP2Q5QJE6 756 aaKnown RBP12.26□□□□□ -0.45
CLDN2-202ENST00000540876 NUTM2DQ5VT03 806 aaPredicted RBP12.26□□□□□ -0.45
CLDN2-202ENST00000540876 GTPBP4Q9BZE4 634 aaKnown RBP12.26□□□□□ -0.45
CLDN2-202ENST00000540876 ZMYM3Q14202 1370 aa12.26□□□□□ -0.45
CLDN2-202ENST00000540876 UGGT1Q9NYU2 1555 aa12.26□□□□□ -0.45
CLDN2-202ENST00000540876 CEP152O94986 1710 aa12.26□□□□□ -0.45
CLDN2-202ENST00000540876 DEPDC5O75140 1603 aa12.25□□□□□ -0.45
CLDN2-202ENST00000540876 EIF2AK4Q9P2K8 1649 aaKnown RBP12.25□□□□□ -0.45
CLDN2-202ENST00000540876 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
CLDN2-202ENST00000540876 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
CLDN2-202ENST00000540876 LETM1O95202 739 aaPredicted RBP12.25□□□□□ -0.45
CLDN2-202ENST00000540876 AGLP35573 1532 aa12.25□□□□□ -0.45
CLDN2-202ENST00000540876 RNF17Q9BXT8 1623 aaKnown RBP12.24□□□□□ -0.45
CLDN2-202ENST00000540876 RPRD2Q5VT52 1461 aaKnown RBP12.24□□□□□ -0.45
CLDN2-202ENST00000540876 VWDEQ8N2E2 1590 aa12.24□□□□□ -0.45
CLDN2-202ENST00000540876 IDI1Q13907 227 aa12.24□□□□□ -0.45
CLDN2-202ENST00000540876 CHMP5Q9NZZ3 219 aa12.24□□□□□ -0.45
CLDN2-202ENST00000540876 CGNQ9P2M7 1197 aaKnown RBP12.24□□□□□ -0.45
CLDN2-202ENST00000540876 DDX11L8A8MPP1 907 aa12.23□□□□□ -0.45
CLDN2-202ENST00000540876 E9PCH4 1651 aa12.23□□□□□ -0.45
CLDN2-202ENST00000540876 UPF2Q9HAU5 1272 aaKnown RBP12.23□□□□□ -0.45
CLDN2-202ENST00000540876 REREQ9P2R6 1566 aa12.22□□□□□ -0.45
CLDN2-202ENST00000540876 CCDC144AA2RUR9 1427 aa12.22□□□□□ -0.45
CLDN2-202ENST00000540876 NASPP49321 788 aaPredicted RBP12.22□□□□□ -0.45
CLDN2-202ENST00000540876 E9PSI1 815 aa12.22□□□□□ -0.45
CLDN2-202ENST00000540876 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
CLDN2-202ENST00000540876 LRPPRCP42704 1394 aaKnown RBP12.21□□□□□ -0.45
CLDN2-202ENST00000540876 CLTCQ00610 1675 aaKnown RBP12.21□□□□□ -0.45
CLDN2-202ENST00000540876 PPP1R9BQ96SB3 815 aa12.21□□□□□ -0.45
CLDN2-202ENST00000540876 DHX37Q8IY37 1157 aaKnown RBP12.21□□□□□ -0.46
CLDN2-202ENST00000540876 EFCAB6Q5THR3 1501 aa12.21□□□□□ -0.46
CLDN2-202ENST00000540876 IGSF3O75054 1194 aa12.2□□□□□ -0.46
CLDN2-202ENST00000540876 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
CLDN2-202ENST00000540876 KDM4FA0A1W2PPD8 638 aa12.19□□□□□ -0.46
CLDN2-202ENST00000540876 PPP6R1Q9UPN7 881 aa12.19□□□□□ -0.46
CLDN2-202ENST00000540876 SECISBP2LQ93073 1101 aaKnown RBP12.19□□□□□ -0.46
CLDN2-202ENST00000540876 TET3O43151 1660 aa12.19□□□□□ -0.46
CLDN2-202ENST00000540876 USP47Q96K76 1375 aa12.19□□□□□ -0.46
CLDN2-202ENST00000540876 ZBTB7CA1YPR0 619 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 SASS6Q6UVJ0 657 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 STAG3Q9UJ98 1225 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 CAMSAP1Q5T5Y3 1602 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 TAF3Q5VWG9 929 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
CLDN2-202ENST00000540876 PTPRTO14522 1441 aa12.17□□□□□ -0.46
CLDN2-202ENST00000540876 MADDQ8WXG6 1647 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 ZNF500O60304 480 aaPredicted RBP12.16□□□□□ -0.46
CLDN2-202ENST00000540876 CSPP1Q1MSJ5 1256 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 TEX2Q8IWB9 1127 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 JARID2Q92833 1246 aaPredicted RBP12.16□□□□□ -0.46
CLDN2-202ENST00000540876 TSC1Q92574 1164 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 TBC1D32Q96NH3 1257 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 PANK3Q9H999 370 aa12.16□□□□□ -0.46
CLDN2-202ENST00000540876 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
CLDN2-202ENST00000540876 MYBBP1AQ9BQG0 1328 aaKnown RBP12.15□□□□□ -0.46
CLDN2-202ENST00000540876 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
CLDN2-202ENST00000540876 NOS1P29475 1434 aa12.15□□□□□ -0.46
CLDN2-202ENST00000540876 IRX3P78415 501 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms