RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
CACNA2D4-211ENST00000540728 DHX57Q6P158 1386 aaKnown RBP25.03■■□□□ 1.6
CACNA2D4-211ENST00000540728 NUTM2BA6NNL0 878 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 NUTM2EB1AL46 878 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 CFAP70Q5T0N1 1121 aa25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 POTEAQ6S8J7 498 aa25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 NUTM2AQ8IVF1 878 aaPredicted RBP25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 DCAF11Q8TEB1 546 aa25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 YTHDC2Q9H6S0 1430 aaKnown RBP25.02■■□□□ 1.6
CACNA2D4-211ENST00000540728 KDM2AQ9Y2K7 1162 aa25.01■■□□□ 1.59
CACNA2D4-211ENST00000540728 WAPLQ7Z5K2 1190 aa24.99■■□□□ 1.59
CACNA2D4-211ENST00000540728 PLEKHH1Q9ULM0 1364 aa24.98■■□□□ 1.59
CACNA2D4-211ENST00000540728 LRRC59Q96AG4 307 aaKnown RBP24.98■■□□□ 1.59
CACNA2D4-211ENST00000540728 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
CACNA2D4-211ENST00000540728 PNPLA6Q8IY17 1366 aa24.97■■□□□ 1.59
CACNA2D4-211ENST00000540728 SIRT1Q96EB6 747 aa24.97■■□□□ 1.59
CACNA2D4-211ENST00000540728 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
CACNA2D4-211ENST00000540728 ESCO1Q5FWF5 840 aa24.93■■□□□ 1.58
CACNA2D4-211ENST00000540728 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
CACNA2D4-211ENST00000540728 ZNF772Q68DY9 489 aaPredicted RBP24.91■■□□□ 1.58
CACNA2D4-211ENST00000540728 POGKQ9P215 609 aa24.9■■□□□ 1.58
CACNA2D4-211ENST00000540728 SOS2Q07890 1332 aaPredicted RBP24.89■■□□□ 1.58
CACNA2D4-211ENST00000540728 NPHP3Q7Z494 1330 aa24.88■■□□□ 1.57
CACNA2D4-211ENST00000540728 PRAM1Q96QH2 718 aa24.88■■□□□ 1.57
CACNA2D4-211ENST00000540728 KIF1AQ12756 1690 aa24.88■■□□□ 1.57
CACNA2D4-211ENST00000540728 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
CACNA2D4-211ENST00000540728 AFF2P51816 1311 aa24.86■■□□□ 1.57
CACNA2D4-211ENST00000540728 DLC1Q96QB1 1528 aa24.86■■□□□ 1.57
CACNA2D4-211ENST00000540728 PXDNQ92626 1479 aa24.86■■□□□ 1.57
CACNA2D4-211ENST00000540728 SAFB2Q14151 953 aaKnown RBP eCLIP24.86■■□□□ 1.57
CACNA2D4-211ENST00000540728 C8orf37Q96NL8 207 aa24.86■■□□□ 1.57
CACNA2D4-211ENST00000540728 XPCQ01831 940 aaPredicted RBP24.85■■□□□ 1.57
CACNA2D4-211ENST00000540728 TRAK1Q9UPV9 953 aa24.85■■□□□ 1.57
CACNA2D4-211ENST00000540728 COL22A1Q8NFW1 1626 aaPredicted RBP24.85■■□□□ 1.57
CACNA2D4-211ENST00000540728 ADAMTS2O95450 1211 aa24.83■■□□□ 1.57
CACNA2D4-211ENST00000540728 FOXO3O43524 673 aa24.82■■□□□ 1.56
CACNA2D4-211ENST00000540728 ADGRB2O60241 1585 aa24.8■■□□□ 1.56
CACNA2D4-211ENST00000540728 RGPD8O14715 1765 aaPredicted RBP24.8■■□□□ 1.56
CACNA2D4-211ENST00000540728 TRIM26Q12899 539 aaPredicted RBP24.78■■□□□ 1.56
CACNA2D4-211ENST00000540728 RXRBP28702 533 aa24.76■■□□□ 1.55
CACNA2D4-211ENST00000540728 NGLY1Q96IV0 654 aa24.76■■□□□ 1.55
CACNA2D4-211ENST00000540728 MINK1Q8N4C8 1332 aaPredicted RBP24.74■■□□□ 1.55
CACNA2D4-211ENST00000540728 ARHGEF28Q8N1W1 1705 aaKnown RBP24.74■■□□□ 1.55
CACNA2D4-211ENST00000540728 KIAA1210Q9ULL0 1709 aa24.74■■□□□ 1.55
CACNA2D4-211ENST00000540728 USP32Q8NFA0 1604 aa24.73■■□□□ 1.55
CACNA2D4-211ENST00000540728 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
CACNA2D4-211ENST00000540728 SIN3AQ96ST3 1273 aa24.73■■□□□ 1.55
CACNA2D4-211ENST00000540728 HIRIP3Q9BW71 556 aaPredicted RBP24.73■■□□□ 1.55
CACNA2D4-211ENST00000540728 PHF8Q9UPP1 1060 aa24.73■■□□□ 1.55
CACNA2D4-211ENST00000540728 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
CACNA2D4-211ENST00000540728 ANKARQ7Z5J8 1434 aa24.72■■□□□ 1.55
CACNA2D4-211ENST00000540728 EIF3AQ14152 1382 aaKnown RBP24.72■■□□□ 1.55
CACNA2D4-211ENST00000540728 CDK12Q9NYV4 1490 aaPredicted RBP24.71■■□□□ 1.55
CACNA2D4-211ENST00000540728 L3MBTL2Q969R5 705 aa24.71■■□□□ 1.55
CACNA2D4-211ENST00000540728 PSME1Q06323 249 aa24.69■■□□□ 1.54
CACNA2D4-211ENST00000540728 TULP4Q9NRJ4 1543 aa24.69■■□□□ 1.54
CACNA2D4-211ENST00000540728 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
CACNA2D4-211ENST00000540728 WASLO00401 505 aaPredicted RBP24.68■■□□□ 1.54
CACNA2D4-211ENST00000540728 KRT28Q7Z3Y7 464 aa24.68■■□□□ 1.54
CACNA2D4-211ENST00000540728 QTRT2Q9H974 415 aaKnown RBP24.68■■□□□ 1.54
CACNA2D4-211ENST00000540728 USP21Q9UK80 565 aa24.68■■□□□ 1.54
CACNA2D4-211ENST00000540728 RGS12O14924 1447 aa24.68■■□□□ 1.54
CACNA2D4-211ENST00000540728 SPATA31A3Q5VYP0 1347 aa24.67■■□□□ 1.54
CACNA2D4-211ENST00000540728 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
CACNA2D4-211ENST00000540728 RBM6P78332 1123 aaKnown RBP24.65■■□□□ 1.54
CACNA2D4-211ENST00000540728 PLEKHG5O94827 1062 aa24.64■■□□□ 1.54
CACNA2D4-211ENST00000540728 HAP1P54257 671 aaPredicted RBP24.64■■□□□ 1.54
CACNA2D4-211ENST00000540728 PMFBP1Q8TBY8 1022 aa24.64■■□□□ 1.54
CACNA2D4-211ENST00000540728 LMOD2Q6P5Q4 547 aa24.63■■□□□ 1.53
CACNA2D4-211ENST00000540728 ABCA3Q99758 1704 aa24.63■■□□□ 1.53
CACNA2D4-211ENST00000540728 ITSN1Q15811 1721 aa24.62■■□□□ 1.53
CACNA2D4-211ENST00000540728 TRPC5Q9UL62 973 aaPredicted RBP24.62■■□□□ 1.53
CACNA2D4-211ENST00000540728 SBNO1A3KN83 1393 aa24.61■■□□□ 1.53
CACNA2D4-211ENST00000540728 ATRNO75882 1429 aa24.61■■□□□ 1.53
CACNA2D4-211ENST00000540728 ARHGEF10O15013 1369 aa24.6■■□□□ 1.53
CACNA2D4-211ENST00000540728 FNBP4Q8N3X1 1017 aaPredicted RBP24.6■■□□□ 1.53
CACNA2D4-211ENST00000540728 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
CACNA2D4-211ENST00000540728 TRPM3Q9HCF6 1732 aaPredicted RBP24.59■■□□□ 1.53
CACNA2D4-211ENST00000540728 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.53
CACNA2D4-211ENST00000540728 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.58■■□□□ 1.52
CACNA2D4-211ENST00000540728 ATP7BP35670 1465 aa24.58■■□□□ 1.52
CACNA2D4-211ENST00000540728 NGDNQ8NEJ9 315 aaKnown RBP24.57■■□□□ 1.52
CACNA2D4-211ENST00000540728 CDK19Q9BWU1 502 aa24.57■■□□□ 1.52
CACNA2D4-211ENST00000540728 CENPJQ9HC77 1338 aaPredicted RBP24.57■■□□□ 1.52
CACNA2D4-211ENST00000540728 NUDT16Q96DE0 195 aaKnown RBP24.56■■□□□ 1.52
CACNA2D4-211ENST00000540728 BCL9LQ86UU0 1499 aa24.56■■□□□ 1.52
CACNA2D4-211ENST00000540728 PLCH1Q4KWH8 1693 aa24.56■■□□□ 1.52
CACNA2D4-211ENST00000540728 CABLES1Q8TDN4 633 aa24.55■■□□□ 1.52
CACNA2D4-211ENST00000540728 UPF1Q92900 1129 aaKnown RBP eCLIP24.54■■□□□ 1.52
CACNA2D4-211ENST00000540728 ALS2Q96Q42 1657 aa24.53■■□□□ 1.52
CACNA2D4-211ENST00000540728 TRPM1Q7Z4N2 1603 aa24.53■■□□□ 1.52
CACNA2D4-211ENST00000540728 ROCK2O75116 1388 aaKnown RBP24.53■■□□□ 1.52
CACNA2D4-211ENST00000540728 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
CACNA2D4-211ENST00000540728 TOPAZ1Q8N9V7 1692 aa24.53■■□□□ 1.52
CACNA2D4-211ENST00000540728 SLIT2O94813 1529 aa24.52■■□□□ 1.52
CACNA2D4-211ENST00000540728 QRICH2Q9H0J4 1663 aa24.51■■□□□ 1.51
CACNA2D4-211ENST00000540728 CCDC61Q9Y6R9 512 aa24.5■■□□□ 1.51
CACNA2D4-211ENST00000540728 PAK3O75914 559 aaPredicted RBP24.49■■□□□ 1.51
CACNA2D4-211ENST00000540728 SRPK2P78362 688 aaKnown RBP24.49■■□□□ 1.51
CACNA2D4-211ENST00000540728 NWD2Q9ULI1 1742 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms