RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 YTHDC2Q9H6S0 1430 aaKnown RBP19.38■□□□□ 0.69
SEMA4D-223ENST00000540475 TMEM132EQ6IEE7 984 aa19.37■□□□□ 0.69
SEMA4D-223ENST00000540475 ORAI2Q96SN7 254 aa19.37■□□□□ 0.69
SEMA4D-223ENST00000540475 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
SEMA4D-223ENST00000540475 DDX17Q92841 729 aaKnown RBP19.36■□□□□ 0.69
SEMA4D-223ENST00000540475 WAPLQ7Z5K2 1190 aa19.35■□□□□ 0.69
SEMA4D-223ENST00000540475 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
SEMA4D-223ENST00000540475 PLEKHH1Q9ULM0 1364 aa19.33■□□□□ 0.69
SEMA4D-223ENST00000540475 ZNF772Q68DY9 489 aaPredicted RBP19.33■□□□□ 0.68
SEMA4D-223ENST00000540475 STK26Q9P289 416 aa19.33■□□□□ 0.68
SEMA4D-223ENST00000540475 COL22A1Q8NFW1 1626 aaPredicted RBP19.33■□□□□ 0.68
SEMA4D-223ENST00000540475 CFAP70Q5T0N1 1121 aa19.32■□□□□ 0.68
SEMA4D-223ENST00000540475 STAC3Q96MF2 364 aa19.32■□□□□ 0.68
SEMA4D-223ENST00000540475 DHX57Q6P158 1386 aaKnown RBP19.32■□□□□ 0.68
SEMA4D-223ENST00000540475 DLC1Q96QB1 1528 aa19.3■□□□□ 0.68
SEMA4D-223ENST00000540475 MEX3CQ5U5Q3 659 aaKnown RBP19.3■□□□□ 0.68
SEMA4D-223ENST00000540475 ADGRB1O14514 1584 aa19.3■□□□□ 0.68
SEMA4D-223ENST00000540475 PXDNQ92626 1479 aa19.29■□□□□ 0.68
SEMA4D-223ENST00000540475 NUTM2BA6NNL0 878 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-223ENST00000540475 NUTM2EB1AL46 878 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-223ENST00000540475 NUTM2AQ8IVF1 878 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-223ENST00000540475 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
SEMA4D-223ENST00000540475 NPHP3Q7Z494 1330 aa19.27■□□□□ 0.68
SEMA4D-223ENST00000540475 ESCO1Q5FWF5 840 aa19.27■□□□□ 0.68
SEMA4D-223ENST00000540475 KIF1AQ12756 1690 aa19.27■□□□□ 0.67
SEMA4D-223ENST00000540475 AFF2P51816 1311 aa19.25■□□□□ 0.67
SEMA4D-223ENST00000540475 CDK12Q9NYV4 1490 aaPredicted RBP19.24■□□□□ 0.67
SEMA4D-223ENST00000540475 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
SEMA4D-223ENST00000540475 MARF1Q9Y4F3 1742 aaKnown RBP19.23■□□□□ 0.67
SEMA4D-223ENST00000540475 FOXO3O43524 673 aa19.22■□□□□ 0.67
SEMA4D-223ENST00000540475 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
SEMA4D-223ENST00000540475 RXRBP28702 533 aa19.21■□□□□ 0.67
SEMA4D-223ENST00000540475 PRAM1Q96QH2 718 aa19.21■□□□□ 0.67
SEMA4D-223ENST00000540475 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
SEMA4D-223ENST00000540475 NUTM2FA1L443 756 aa19.19■□□□□ 0.66
SEMA4D-223ENST00000540475 FNBP4Q8N3X1 1017 aaPredicted RBP19.19■□□□□ 0.66
SEMA4D-223ENST00000540475 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
SEMA4D-223ENST00000540475 KIAA1210Q9ULL0 1709 aa19.19■□□□□ 0.66
SEMA4D-223ENST00000540475 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
SEMA4D-223ENST00000540475 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
SEMA4D-223ENST00000540475 SPATA31A3Q5VYP0 1347 aa19.17■□□□□ 0.66
SEMA4D-223ENST00000540475 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
SEMA4D-223ENST00000540475 NGLY1Q96IV0 654 aa19.16■□□□□ 0.66
SEMA4D-223ENST00000540475 QTRT2Q9H974 415 aaKnown RBP19.16■□□□□ 0.66
SEMA4D-223ENST00000540475 ARHGEF28Q8N1W1 1705 aaKnown RBP19.16■□□□□ 0.66
SEMA4D-223ENST00000540475 RBM6P78332 1123 aaKnown RBP19.15■□□□□ 0.66
SEMA4D-223ENST00000540475 POGKQ9P215 609 aa19.15■□□□□ 0.66
SEMA4D-223ENST00000540475 PHF8Q9UPP1 1060 aa19.15■□□□□ 0.66
SEMA4D-223ENST00000540475 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
SEMA4D-223ENST00000540475 XPCQ01831 940 aaPredicted RBP19.14■□□□□ 0.65
SEMA4D-223ENST00000540475 KRT28Q7Z3Y7 464 aa19.14■□□□□ 0.65
SEMA4D-223ENST00000540475 SBNO1A3KN83 1393 aa19.12■□□□□ 0.65
SEMA4D-223ENST00000540475 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
SEMA4D-223ENST00000540475 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.11■□□□□ 0.65
SEMA4D-223ENST00000540475 BCL9LQ86UU0 1499 aa19.11■□□□□ 0.65
SEMA4D-223ENST00000540475 USP21Q9UK80 565 aa19.11■□□□□ 0.65
SEMA4D-223ENST00000540475 TULP4Q9NRJ4 1543 aa19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 ATRNO75882 1429 aa19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 TNS3Q68CZ2 1445 aa19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 PSME1Q06323 249 aa19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 TRPM3Q9HCF6 1732 aaPredicted RBP19.1■□□□□ 0.65
SEMA4D-223ENST00000540475 RGS12O14924 1447 aa19.09■□□□□ 0.65
SEMA4D-223ENST00000540475 WASLO00401 505 aaPredicted RBP19.09■□□□□ 0.65
SEMA4D-223ENST00000540475 UPF1Q92900 1129 aaKnown RBP eCLIP19.09■□□□□ 0.65
SEMA4D-223ENST00000540475 TRPC5Q9UL62 973 aaPredicted RBP19.09■□□□□ 0.65
SEMA4D-223ENST00000540475 ABCA3Q99758 1704 aa19.08■□□□□ 0.64
SEMA4D-223ENST00000540475 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
SEMA4D-223ENST00000540475 SLIT2O94813 1529 aa19.07■□□□□ 0.64
SEMA4D-223ENST00000540475 ALS2Q96Q42 1657 aa19.07■□□□□ 0.64
SEMA4D-223ENST00000540475 MINK1Q8N4C8 1332 aaPredicted RBP19.06■□□□□ 0.64
SEMA4D-223ENST00000540475 ITSN1Q15811 1721 aa19.06■□□□□ 0.64
SEMA4D-223ENST00000540475 HIRIP3Q9BW71 556 aaPredicted RBP19.06■□□□□ 0.64
SEMA4D-223ENST00000540475 ARHGEF10O15013 1369 aa19.05■□□□□ 0.64
SEMA4D-223ENST00000540475 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
SEMA4D-223ENST00000540475 NWD2Q9ULI1 1742 aa19.04■□□□□ 0.64
SEMA4D-223ENST00000540475 EP400Q96L91 3159 aa19.03■□□□□ 0.64
SEMA4D-223ENST00000540475 ATP7BP35670 1465 aa19.03■□□□□ 0.64
SEMA4D-223ENST00000540475 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
SEMA4D-223ENST00000540475 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
SEMA4D-223ENST00000540475 UNC5CLQ8IV45 518 aa19.01■□□□□ 0.63
SEMA4D-223ENST00000540475 TOPAZ1Q8N9V7 1692 aa19.01■□□□□ 0.63
SEMA4D-223ENST00000540475 GJD4Q96KN9 370 aaPredicted RBP19■□□□□ 0.63
SEMA4D-223ENST00000540475 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
SEMA4D-223ENST00000540475 GPRASP1Q5JY77 1395 aa18.99■□□□□ 0.63
SEMA4D-223ENST00000540475 NUDT16Q96DE0 195 aaKnown RBP18.99■□□□□ 0.63
SEMA4D-223ENST00000540475 GLI3P10071 1580 aa18.98■□□□□ 0.63
SEMA4D-223ENST00000540475 CABLES1Q8TDN4 633 aa18.98■□□□□ 0.63
SEMA4D-223ENST00000540475 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
SEMA4D-223ENST00000540475 CDK19Q9BWU1 502 aa18.97■□□□□ 0.63
SEMA4D-223ENST00000540475 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
SEMA4D-223ENST00000540475 POLR3AO14802 1390 aaPredicted RBP18.96■□□□□ 0.63
SEMA4D-223ENST00000540475 NRAPQ86VF7 1730 aa18.95■□□□□ 0.62
SEMA4D-223ENST00000540475 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
SEMA4D-223ENST00000540475 RALGAPBQ86X10 1494 aa18.95■□□□□ 0.62
SEMA4D-223ENST00000540475 ATAD2Q6PL18 1390 aa18.94■□□□□ 0.62
SEMA4D-223ENST00000540475 NGDNQ8NEJ9 315 aaKnown RBP18.94■□□□□ 0.62
SEMA4D-223ENST00000540475 SIN3AQ96ST3 1273 aa18.94■□□□□ 0.62
SEMA4D-223ENST00000540475 CCDC61Q9Y6R9 512 aa18.94■□□□□ 0.62
SEMA4D-223ENST00000540475 COL14A1Q05707 1796 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms