RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
COPS7A-211ENST00000540408 FOXD1Q16676 465 aa18.66■□□□□ 0.58
COPS7A-211ENST00000540408 RGL3Q3MIN7 710 aa18.66■□□□□ 0.58
COPS7A-211ENST00000540408 LRPPRCP42704 1394 aaKnown RBP18.66■□□□□ 0.58
COPS7A-211ENST00000540408 STK26Q9P289 416 aa18.65■□□□□ 0.58
COPS7A-211ENST00000540408 ATAD2Q6PL18 1390 aa18.65■□□□□ 0.58
COPS7A-211ENST00000540408 CCDC144AA2RUR9 1427 aa18.65■□□□□ 0.58
COPS7A-211ENST00000540408 PPLO60437 1756 aa18.64■□□□□ 0.57
COPS7A-211ENST00000540408 FOXO3O43524 673 aa18.64■□□□□ 0.57
COPS7A-211ENST00000540408 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
COPS7A-211ENST00000540408 ANKRD30BQ9BXX2 1392 aa18.63■□□□□ 0.57
COPS7A-211ENST00000540408 NUTM2FA1L443 756 aa18.61■□□□□ 0.57
COPS7A-211ENST00000540408 WAPLQ7Z5K2 1190 aa18.61■□□□□ 0.57
COPS7A-211ENST00000540408 CDC42BPGQ6DT37 1551 aa18.6■□□□□ 0.57
COPS7A-211ENST00000540408 XPCQ01831 940 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-211ENST00000540408 MPHOSPH9Q99550 1183 aa18.6■□□□□ 0.57
COPS7A-211ENST00000540408 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
COPS7A-211ENST00000540408 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.56
COPS7A-211ENST00000540408 COL22A1Q8NFW1 1626 aaPredicted RBP18.58■□□□□ 0.56
COPS7A-211ENST00000540408 ATRNO75882 1429 aa18.57■□□□□ 0.56
COPS7A-211ENST00000540408 ACIN1Q9UKV3 1341 aaKnown RBP18.57■□□□□ 0.56
COPS7A-211ENST00000540408 CCDC125Q86Z20 511 aa18.57■□□□□ 0.56
COPS7A-211ENST00000540408 MYOM2P54296 1465 aa18.57■□□□□ 0.56
COPS7A-211ENST00000540408 TECPR2O15040 1411 aa18.57■□□□□ 0.56
COPS7A-211ENST00000540408 PXDNQ92626 1479 aa18.56■□□□□ 0.56
COPS7A-211ENST00000540408 GJD4Q96KN9 370 aaPredicted RBP18.55■□□□□ 0.56
COPS7A-211ENST00000540408 SPATA31E1Q6ZUB1 1445 aa18.55■□□□□ 0.56
COPS7A-211ENST00000540408 HAP1P54257 671 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-211ENST00000540408 SIRT1Q96EB6 747 aa18.54■□□□□ 0.56
COPS7A-211ENST00000540408 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
COPS7A-211ENST00000540408 BCL9LQ86UU0 1499 aa18.53■□□□□ 0.56
COPS7A-211ENST00000540408 PSME1Q06323 249 aa18.53■□□□□ 0.56
COPS7A-211ENST00000540408 KRT28Q7Z3Y7 464 aa18.53■□□□□ 0.56
COPS7A-211ENST00000540408 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
COPS7A-211ENST00000540408 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
COPS7A-211ENST00000540408 UNC5CLQ8IV45 518 aa18.52■□□□□ 0.56
COPS7A-211ENST00000540408 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.55
COPS7A-211ENST00000540408 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
COPS7A-211ENST00000540408 DHX57Q6P158 1386 aaKnown RBP18.51■□□□□ 0.55
COPS7A-211ENST00000540408 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
COPS7A-211ENST00000540408 PHF8Q9UPP1 1060 aa18.49■□□□□ 0.55
COPS7A-211ENST00000540408 KNDC1Q76NI1 1749 aa18.48■□□□□ 0.55
COPS7A-211ENST00000540408 MARF1Q9Y4F3 1742 aaKnown RBP18.48■□□□□ 0.55
COPS7A-211ENST00000540408 IFT172Q9UG01 1749 aa18.47■□□□□ 0.55
COPS7A-211ENST00000540408 KIF1AQ12756 1690 aa18.47■□□□□ 0.55
COPS7A-211ENST00000540408 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
COPS7A-211ENST00000540408 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
COPS7A-211ENST00000540408 FMN2Q9NZ56 1722 aa18.46■□□□□ 0.55
COPS7A-211ENST00000540408 POGKQ9P215 609 aa18.45■□□□□ 0.54
COPS7A-211ENST00000540408 SLIT2O94813 1529 aa18.44■□□□□ 0.54
COPS7A-211ENST00000540408 SF3B2Q13435 895 aaKnown RBP18.44■□□□□ 0.54
COPS7A-211ENST00000540408 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
COPS7A-211ENST00000540408 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
COPS7A-211ENST00000540408 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
COPS7A-211ENST00000540408 PLEKHG5O94827 1062 aa18.43■□□□□ 0.54
COPS7A-211ENST00000540408 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
COPS7A-211ENST00000540408 TNS3Q68CZ2 1445 aa18.42■□□□□ 0.54
COPS7A-211ENST00000540408 VPS72Q15906 364 aa18.42■□□□□ 0.54
COPS7A-211ENST00000540408 CABLES1Q8TDN4 633 aa18.42■□□□□ 0.54
COPS7A-211ENST00000540408 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.42■□□□□ 0.54
COPS7A-211ENST00000540408 SBNO1A3KN83 1393 aa18.42■□□□□ 0.54
COPS7A-211ENST00000540408 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
COPS7A-211ENST00000540408 SEPT12Q8IYM1 358 aa18.41■□□□□ 0.54
COPS7A-211ENST00000540408 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-211ENST00000540408 NRXN1Q9ULB1 1477 aa18.39■□□□□ 0.54
COPS7A-211ENST00000540408 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
COPS7A-211ENST00000540408 PMFBP1Q8TBY8 1022 aa18.39■□□□□ 0.53
COPS7A-211ENST00000540408 GLI3P10071 1580 aa18.38■□□□□ 0.53
COPS7A-211ENST00000540408 A0A0G2JS52 829 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 ONECUT3O60422 494 aaPredicted RBP18.36■□□□□ 0.53
COPS7A-211ENST00000540408 MYT1Q01538 1121 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 KRT27Q7Z3Y8 459 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 ANKARQ7Z5J8 1434 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
COPS7A-211ENST00000540408 RGPD8O14715 1765 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-211ENST00000540408 EIF3AQ14152 1382 aaKnown RBP18.35■□□□□ 0.53
COPS7A-211ENST00000540408 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
COPS7A-211ENST00000540408 FAM83GA6ND36 823 aa18.34■□□□□ 0.53
COPS7A-211ENST00000540408 EP400Q96L91 3159 aa18.34■□□□□ 0.53
COPS7A-211ENST00000540408 DEFB132Q7Z7B7 95 aa18.33■□□□□ 0.52
COPS7A-211ENST00000540408 STAC3Q96MF2 364 aa18.33■□□□□ 0.52
COPS7A-211ENST00000540408 HIRIP3Q9BW71 556 aaPredicted RBP18.33■□□□□ 0.52
COPS7A-211ENST00000540408 KDM2AQ9Y2K7 1162 aa18.33■□□□□ 0.52
COPS7A-211ENST00000540408 MINK1Q8N4C8 1332 aaPredicted RBP18.32■□□□□ 0.52
COPS7A-211ENST00000540408 DCAF11Q8TEB1 546 aa18.32■□□□□ 0.52
COPS7A-211ENST00000540408 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
COPS7A-211ENST00000540408 NWD2Q9ULI1 1742 aa18.32■□□□□ 0.52
COPS7A-211ENST00000540408 NGDNQ8NEJ9 315 aaKnown RBP18.31■□□□□ 0.52
COPS7A-211ENST00000540408 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
COPS7A-211ENST00000540408 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
COPS7A-211ENST00000540408 BAG6P46379 1132 aa18.3■□□□□ 0.52
COPS7A-211ENST00000540408 PLCH1Q4KWH8 1693 aa18.29■□□□□ 0.52
COPS7A-211ENST00000540408 BRWD3Q6RI45 1802 aa18.29■□□□□ 0.52
COPS7A-211ENST00000540408 PAK3O75914 559 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-211ENST00000540408 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
COPS7A-211ENST00000540408 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
COPS7A-211ENST00000540408 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
COPS7A-211ENST00000540408 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
COPS7A-211ENST00000540408 PRDM11Q9NQV5 511 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms