RNA–Protein interactions for RNA: ENST00000540309.5

GPD2-213, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

TSL 1 (best) BASIC

Gene GPD2, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-213ENST00000540309 RTEL1-TNFRSF6BF6WH68 1400 aa13.08□□□□□ -0.32
GPD2-213ENST00000540309 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
GPD2-213ENST00000540309 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.32
GPD2-213ENST00000540309 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.32
GPD2-213ENST00000540309 WWC1Q8IX03 1113 aa13.08□□□□□ -0.32
GPD2-213ENST00000540309 PTPRTO14522 1441 aa13.08□□□□□ -0.32
GPD2-213ENST00000540309 USP32Q8NFA0 1604 aa13.07□□□□□ -0.32
GPD2-213ENST00000540309 DDIT3P35638 169 aa13.07□□□□□ -0.32
GPD2-213ENST00000540309 IQSEC2Q5JU85 1478 aa13.07□□□□□ -0.32
GPD2-213ENST00000540309 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
GPD2-213ENST00000540309 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
GPD2-213ENST00000540309 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
GPD2-213ENST00000540309 SYCP2Q9BX26 1530 aa13.06□□□□□ -0.32
GPD2-213ENST00000540309 SHPRHQ149N8 1683 aa13.06□□□□□ -0.32
GPD2-213ENST00000540309 PDCL3Q9H2J4 239 aa13.06□□□□□ -0.32
GPD2-213ENST00000540309 C22orf23Q9BZE7 217 aa13.05□□□□□ -0.32
GPD2-213ENST00000540309 PDZRN3Q9UPQ7 1066 aa13.05□□□□□ -0.32
GPD2-213ENST00000540309 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
GPD2-213ENST00000540309 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
GPD2-213ENST00000540309 HDAC1Q13547 482 aaPredicted RBP13.05□□□□□ -0.32
GPD2-213ENST00000540309 MYOM2P54296 1465 aa13.04□□□□□ -0.32
GPD2-213ENST00000540309 RBM25P49756 843 aaKnown RBP13.04□□□□□ -0.32
GPD2-213ENST00000540309 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
GPD2-213ENST00000540309 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
GPD2-213ENST00000540309 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
GPD2-213ENST00000540309 HS1BP3Q53T59 392 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 CLEC17AQ6ZS10 378 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 HSCBQ8IWL3 235 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 RUNDC1Q96C34 613 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 PANK1Q8TE04 598 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 TRIM44Q96DX7 344 aaPredicted RBP13.03□□□□□ -0.32
GPD2-213ENST00000540309 PCDHB15Q9Y5E8 787 aa13.03□□□□□ -0.32
GPD2-213ENST00000540309 REREQ9P2R6 1566 aa13.02□□□□□ -0.32
GPD2-213ENST00000540309 DEPDC5O75140 1603 aa13.02□□□□□ -0.32
GPD2-213ENST00000540309 MAP7D2Q96T17 732 aa13.02□□□□□ -0.32
GPD2-213ENST00000540309 KIF16BQ96L93 1317 aa13.02□□□□□ -0.33
GPD2-213ENST00000540309 CCDC173Q0VFZ6 552 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
GPD2-213ENST00000540309 PPP1R9BQ96SB3 815 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 ERVK-7P63135 1459 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 PANK2Q9BZ23 570 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 TET3O43151 1660 aa13.01□□□□□ -0.33
GPD2-213ENST00000540309 ARHGAP5Q13017 1502 aa13□□□□□ -0.33
GPD2-213ENST00000540309 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
GPD2-213ENST00000540309 CHMP7Q8WUX9 453 aaPredicted RBP13□□□□□ -0.33
GPD2-213ENST00000540309 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
GPD2-213ENST00000540309 ADGRB2O60241 1585 aa12.99□□□□□ -0.33
GPD2-213ENST00000540309 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
GPD2-213ENST00000540309 RAB3GAP1Q15042 981 aa12.98□□□□□ -0.33
GPD2-213ENST00000540309 ZKSCAN2Q63HK3 967 aa12.98□□□□□ -0.33
GPD2-213ENST00000540309 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
GPD2-213ENST00000540309 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.98□□□□□ -0.33
GPD2-213ENST00000540309 DMRT2Q9Y5R5 561 aa12.98□□□□□ -0.33
GPD2-213ENST00000540309 CLTCL1P53675 1640 aa12.97□□□□□ -0.33
GPD2-213ENST00000540309 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
GPD2-213ENST00000540309 CFAP44Q96MT7 982 aa12.97□□□□□ -0.33
GPD2-213ENST00000540309 DDX19BQ9UMR2 479 aa12.97□□□□□ -0.33
GPD2-213ENST00000540309 IFT172Q9UG01 1749 aa12.97□□□□□ -0.33
GPD2-213ENST00000540309 VWDEQ8N2E2 1590 aa12.97□□□□□ -0.33
GPD2-213ENST00000540309 NRXN1Q9ULB1 1477 aa12.96□□□□□ -0.33
GPD2-213ENST00000540309 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.96□□□□□ -0.33
GPD2-213ENST00000540309 NSD2O96028 1365 aa12.96□□□□□ -0.33
GPD2-213ENST00000540309 ARAP3Q8WWN8 1544 aa12.96□□□□□ -0.33
GPD2-213ENST00000540309 ZNF518AQ6AHZ1 1483 aa12.96□□□□□ -0.34
GPD2-213ENST00000540309 OFD1O75665 1012 aa12.96□□□□□ -0.34
GPD2-213ENST00000540309 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.34
GPD2-213ENST00000540309 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.34
GPD2-213ENST00000540309 ANP32BQ92688 251 aaKnown RBP12.96□□□□□ -0.34
GPD2-213ENST00000540309 GOLGA6L22H0YM25 854 aa12.95□□□□□ -0.34
GPD2-213ENST00000540309 RLBP1P12271 317 aa12.95□□□□□ -0.34
GPD2-213ENST00000540309 DZIP1LQ8IYY4 767 aaKnown RBP12.95□□□□□ -0.34
GPD2-213ENST00000540309 CHMP4BQ9H444 224 aaKnown RBP12.94□□□□□ -0.34
GPD2-213ENST00000540309 IL16Q14005 1332 aa12.94□□□□□ -0.34
GPD2-213ENST00000540309 INO80Q9ULG1 1556 aaPredicted RBP12.94□□□□□ -0.34
GPD2-213ENST00000540309 TCP11L2Q8N4U5 519 aa12.94□□□□□ -0.34
GPD2-213ENST00000540309 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
GPD2-213ENST00000540309 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
GPD2-213ENST00000540309 ERBB4Q15303 1308 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 MCM5P33992 734 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 CARD14Q9BXL6 1004 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
GPD2-213ENST00000540309 ABCC1P33527 1531 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 ABCA6Q8N139 1617 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 KIF1BO60333 1816 aa12.93□□□□□ -0.34
GPD2-213ENST00000540309 KLHL40Q2TBA0 621 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
GPD2-213ENST00000540309 ABCC11Q96J66 1382 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 PLCH2O75038 1416 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 YEATS2Q9ULM3 1422 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 BMP2KLQ5H9B9 411 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 ZNF428Q96B54 188 aa12.92□□□□□ -0.34
GPD2-213ENST00000540309 MFAP1P55081 439 aaKnown RBP12.91□□□□□ -0.34
GPD2-213ENST00000540309 ZNF445P59923 1031 aa12.91□□□□□ -0.34
GPD2-213ENST00000540309 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
GPD2-213ENST00000540309 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
GPD2-213ENST00000540309 ZNF500O60304 480 aaPredicted RBP12.9□□□□□ -0.34
GPD2-213ENST00000540309 BRPF1P55201 1214 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms