RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 C1orf167Q5SNV9 1468 aa19.32■□□□□ 0.68
CCDC130-202ENST00000540216 BRINP3Q76B58 766 aa19.31■□□□□ 0.68
CCDC130-202ENST00000540216 COL16A1Q07092 1604 aaPredicted RBP19.29■□□□□ 0.68
CCDC130-202ENST00000540216 PRAM1Q96QH2 718 aa19.29■□□□□ 0.68
CCDC130-202ENST00000540216 POGKQ9P215 609 aa19.28■□□□□ 0.68
CCDC130-202ENST00000540216 NHSL1Q5SYE7 1610 aa19.28■□□□□ 0.68
CCDC130-202ENST00000540216 ADGRB2O60241 1585 aa19.27■□□□□ 0.68
CCDC130-202ENST00000540216 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.68
CCDC130-202ENST00000540216 TRAK1Q9UPV9 953 aa19.27■□□□□ 0.68
CCDC130-202ENST00000540216 FMN2Q9NZ56 1722 aa19.26■□□□□ 0.67
CCDC130-202ENST00000540216 ARHGEF28Q8N1W1 1705 aaKnown RBP19.25■□□□□ 0.67
CCDC130-202ENST00000540216 MED1Q15648 1581 aaPredicted RBP19.25■□□□□ 0.67
CCDC130-202ENST00000540216 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
CCDC130-202ENST00000540216 JCADQ9P266 1359 aa19.24■□□□□ 0.67
CCDC130-202ENST00000540216 TRPM1Q7Z4N2 1603 aa19.23■□□□□ 0.67
CCDC130-202ENST00000540216 SAFB2Q14151 953 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCDC130-202ENST00000540216 CLSPNQ9HAW4 1339 aa19.22■□□□□ 0.67
CCDC130-202ENST00000540216 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
CCDC130-202ENST00000540216 DISP3Q9P2K9 1392 aa19.21■□□□□ 0.67
CCDC130-202ENST00000540216 NBPF1Q3BBV0 1214 aa19.21■□□□□ 0.67
CCDC130-202ENST00000540216 ORAI2Q96SN7 254 aa19.21■□□□□ 0.67
CCDC130-202ENST00000540216 ANKARQ7Z5J8 1434 aa19.2■□□□□ 0.66
CCDC130-202ENST00000540216 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
CCDC130-202ENST00000540216 ESCO1Q5FWF5 840 aa19.19■□□□□ 0.66
CCDC130-202ENST00000540216 KIF1AQ12756 1690 aa19.19■□□□□ 0.66
CCDC130-202ENST00000540216 NPHP3Q7Z494 1330 aa19.18■□□□□ 0.66
CCDC130-202ENST00000540216 ROCK2O75116 1388 aaKnown RBP19.18■□□□□ 0.66
CCDC130-202ENST00000540216 LRRC59Q96AG4 307 aaKnown RBP19.17■□□□□ 0.66
CCDC130-202ENST00000540216 SPATA31A6Q5VVP1 1343 aa19.17■□□□□ 0.66
CCDC130-202ENST00000540216 MINK1Q8N4C8 1332 aaPredicted RBP19.17■□□□□ 0.66
CCDC130-202ENST00000540216 SOS2Q07890 1332 aaPredicted RBP19.16■□□□□ 0.66
CCDC130-202ENST00000540216 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
CCDC130-202ENST00000540216 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
CCDC130-202ENST00000540216 GPRASP1Q5JY77 1395 aa19.15■□□□□ 0.66
CCDC130-202ENST00000540216 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
CCDC130-202ENST00000540216 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
CCDC130-202ENST00000540216 HIRIP3Q9BW71 556 aaPredicted RBP19.14■□□□□ 0.65
CCDC130-202ENST00000540216 NBPF8Q3BBV2 869 aa19.13■□□□□ 0.65
CCDC130-202ENST00000540216 CENPJQ9HC77 1338 aaPredicted RBP19.13■□□□□ 0.65
CCDC130-202ENST00000540216 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
CCDC130-202ENST00000540216 PXDNQ92626 1479 aa19.13■□□□□ 0.65
CCDC130-202ENST00000540216 USP32Q8NFA0 1604 aa19.13■□□□□ 0.65
CCDC130-202ENST00000540216 RGPD8O14715 1765 aaPredicted RBP19.12■□□□□ 0.65
CCDC130-202ENST00000540216 FOXO3O43524 673 aa19.11■□□□□ 0.65
CCDC130-202ENST00000540216 TIMELESSQ9UNS1 1208 aa19.11■□□□□ 0.65
CCDC130-202ENST00000540216 PHF8Q9UPP1 1060 aa19.11■□□□□ 0.65
CCDC130-202ENST00000540216 QRICH2Q9H0J4 1663 aa19.11■□□□□ 0.65
CCDC130-202ENST00000540216 PNPLA6Q8IY17 1366 aa19.1■□□□□ 0.65
CCDC130-202ENST00000540216 PHF23Q9BUL5 403 aaPredicted RBP19.1■□□□□ 0.65
CCDC130-202ENST00000540216 ATP7BP35670 1465 aa19.09■□□□□ 0.65
CCDC130-202ENST00000540216 ITSN1Q15811 1721 aa19.08■□□□□ 0.65
CCDC130-202ENST00000540216 LRP6O75581 1613 aa19.07■□□□□ 0.64
CCDC130-202ENST00000540216 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
CCDC130-202ENST00000540216 COL22A1Q8NFW1 1626 aaPredicted RBP19.07■□□□□ 0.64
CCDC130-202ENST00000540216 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
CCDC130-202ENST00000540216 CARD11Q9BXL7 1154 aa19.06■□□□□ 0.64
CCDC130-202ENST00000540216 PSME1Q06323 249 aa19.05■□□□□ 0.64
CCDC130-202ENST00000540216 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
CCDC130-202ENST00000540216 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
CCDC130-202ENST00000540216 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
CCDC130-202ENST00000540216 TOPAZ1Q8N9V7 1692 aa19.04■□□□□ 0.64
CCDC130-202ENST00000540216 KRT28Q7Z3Y7 464 aa19.03■□□□□ 0.64
CCDC130-202ENST00000540216 SBNO1A3KN83 1393 aa19.03■□□□□ 0.64
CCDC130-202ENST00000540216 SBNO2Q9Y2G9 1366 aa19.03■□□□□ 0.64
CCDC130-202ENST00000540216 MEX3CQ5U5Q3 659 aaKnown RBP19.02■□□□□ 0.64
CCDC130-202ENST00000540216 PMFBP1Q8TBY8 1022 aa19.02■□□□□ 0.64
CCDC130-202ENST00000540216 SPATA31A3Q5VYP0 1347 aa19.01■□□□□ 0.63
CCDC130-202ENST00000540216 EVC2Q86UK5 1308 aa19.01■□□□□ 0.63
CCDC130-202ENST00000540216 TNS3Q68CZ2 1445 aa19.01■□□□□ 0.63
CCDC130-202ENST00000540216 NUTM2BA6NNL0 878 aaPredicted RBP19.01■□□□□ 0.63
CCDC130-202ENST00000540216 NUTM2EB1AL46 878 aaPredicted RBP19.01■□□□□ 0.63
CCDC130-202ENST00000540216 NUTM2AQ8IVF1 878 aaPredicted RBP19.01■□□□□ 0.63
CCDC130-202ENST00000540216 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
CCDC130-202ENST00000540216 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
CCDC130-202ENST00000540216 ARHGEF10O15013 1369 aa18.99■□□□□ 0.63
CCDC130-202ENST00000540216 NGDNQ8NEJ9 315 aaKnown RBP18.99■□□□□ 0.63
CCDC130-202ENST00000540216 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
CCDC130-202ENST00000540216 TRPM3Q9HCF6 1732 aaPredicted RBP18.98■□□□□ 0.63
CCDC130-202ENST00000540216 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
CCDC130-202ENST00000540216 RGS17Q9UGC6 210 aaPredicted RBP18.98■□□□□ 0.63
CCDC130-202ENST00000540216 ILDR2Q71H61 639 aa18.96■□□□□ 0.63
CCDC130-202ENST00000540216 CABP2Q9NPB3 220 aa18.96■□□□□ 0.63
CCDC130-202ENST00000540216 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
CCDC130-202ENST00000540216 ZNF772Q68DY9 489 aaPredicted RBP18.94■□□□□ 0.62
CCDC130-202ENST00000540216 ALS2Q96Q42 1657 aa18.94■□□□□ 0.62
CCDC130-202ENST00000540216 ACEP12821 1306 aa18.94■□□□□ 0.62
CCDC130-202ENST00000540216 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
CCDC130-202ENST00000540216 SLC24A1O60721 1099 aa18.92■□□□□ 0.62
CCDC130-202ENST00000540216 MARF1Q9Y4F3 1742 aaKnown RBP18.91■□□□□ 0.62
CCDC130-202ENST00000540216 ADAMTS2O95450 1211 aa18.91■□□□□ 0.62
CCDC130-202ENST00000540216 C8orf37Q96NL8 207 aa18.91■□□□□ 0.62
CCDC130-202ENST00000540216 BRD4O60885 1362 aaPredicted RBP18.91■□□□□ 0.62
CCDC130-202ENST00000540216 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
CCDC130-202ENST00000540216 AFF2P51816 1311 aa18.9■□□□□ 0.62
CCDC130-202ENST00000540216 USP47Q96K76 1375 aa18.9■□□□□ 0.62
CCDC130-202ENST00000540216 ABCA3Q99758 1704 aa18.89■□□□□ 0.61
CCDC130-202ENST00000540216 PAK3O75914 559 aaPredicted RBP18.88■□□□□ 0.61
CCDC130-202ENST00000540216 HAP1P54257 671 aaPredicted RBP18.88■□□□□ 0.61
CCDC130-202ENST00000540216 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
CCDC130-202ENST00000540216 NGLY1Q96IV0 654 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms