RNA–Protein interactions for RNA: ENST00000539953.1

SCNN1A-214, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 2

Gene SCNN1A, Length 401 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-214ENST00000539953 TECPR2O15040 1411 aa18.61■□□□□ 0.57
SCNN1A-214ENST00000539953 MPHOSPH9Q99550 1183 aa18.61■□□□□ 0.57
SCNN1A-214ENST00000539953 PXDNQ92626 1479 aa18.58■□□□□ 0.57
SCNN1A-214ENST00000539953 RGS12O14924 1447 aa18.58■□□□□ 0.57
SCNN1A-214ENST00000539953 MARF1Q9Y4F3 1742 aaKnown RBP18.58■□□□□ 0.57
SCNN1A-214ENST00000539953 RGL3Q3MIN7 710 aa18.58■□□□□ 0.56
SCNN1A-214ENST00000539953 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 LRPPRCP42704 1394 aaKnown RBP18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 ANKRD30BQ9BXX2 1392 aa18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 ADAMTS2O95450 1211 aa18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 QTRT2Q9H974 415 aaKnown RBP18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
SCNN1A-214ENST00000539953 WAPLQ7Z5K2 1190 aa18.56■□□□□ 0.56
SCNN1A-214ENST00000539953 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
SCNN1A-214ENST00000539953 MYOM2P54296 1465 aa18.55■□□□□ 0.56
SCNN1A-214ENST00000539953 RBM6P78332 1123 aaKnown RBP18.55■□□□□ 0.56
SCNN1A-214ENST00000539953 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
SCNN1A-214ENST00000539953 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
SCNN1A-214ENST00000539953 TMEM132EQ6IEE7 984 aa18.54■□□□□ 0.56
SCNN1A-214ENST00000539953 NGLY1Q96IV0 654 aa18.54■□□□□ 0.56
SCNN1A-214ENST00000539953 STK26Q9P289 416 aa18.54■□□□□ 0.56
SCNN1A-214ENST00000539953 ESCO1Q5FWF5 840 aa18.53■□□□□ 0.56
SCNN1A-214ENST00000539953 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.56
SCNN1A-214ENST00000539953 YTHDC2Q9H6S0 1430 aaKnown RBP18.52■□□□□ 0.56
SCNN1A-214ENST00000539953 NPHP3Q7Z494 1330 aa18.51■□□□□ 0.55
SCNN1A-214ENST00000539953 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
SCNN1A-214ENST00000539953 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
SCNN1A-214ENST00000539953 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
SCNN1A-214ENST00000539953 FOXO3O43524 673 aa18.49■□□□□ 0.55
SCNN1A-214ENST00000539953 XPCQ01831 940 aaPredicted RBP18.49■□□□□ 0.55
SCNN1A-214ENST00000539953 USP21Q9UK80 565 aa18.49■□□□□ 0.55
SCNN1A-214ENST00000539953 ATRNO75882 1429 aa18.49■□□□□ 0.55
SCNN1A-214ENST00000539953 BCL9LQ86UU0 1499 aa18.47■□□□□ 0.55
SCNN1A-214ENST00000539953 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
SCNN1A-214ENST00000539953 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.55
SCNN1A-214ENST00000539953 SIRT1Q96EB6 747 aa18.46■□□□□ 0.55
SCNN1A-214ENST00000539953 TRPC5Q9UL62 973 aaPredicted RBP18.46■□□□□ 0.55
SCNN1A-214ENST00000539953 CFAP70Q5T0N1 1121 aa18.44■□□□□ 0.54
SCNN1A-214ENST00000539953 USP32Q8NFA0 1604 aa18.43■□□□□ 0.54
SCNN1A-214ENST00000539953 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
SCNN1A-214ENST00000539953 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
SCNN1A-214ENST00000539953 EP400Q96L91 3159 aa18.42■□□□□ 0.54
SCNN1A-214ENST00000539953 SPATA31A3Q5VYP0 1347 aa18.42■□□□□ 0.54
SCNN1A-214ENST00000539953 ABCA3Q99758 1704 aa18.41■□□□□ 0.54
SCNN1A-214ENST00000539953 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
SCNN1A-214ENST00000539953 ADGRB1O14514 1584 aa18.41■□□□□ 0.54
SCNN1A-214ENST00000539953 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
SCNN1A-214ENST00000539953 SLIT2O94813 1529 aa18.39■□□□□ 0.54
SCNN1A-214ENST00000539953 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
SCNN1A-214ENST00000539953 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
SCNN1A-214ENST00000539953 GLI3P10071 1580 aa18.38■□□□□ 0.53
SCNN1A-214ENST00000539953 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
SCNN1A-214ENST00000539953 BRWD3Q6RI45 1802 aa18.37■□□□□ 0.53
SCNN1A-214ENST00000539953 PRAM1Q96QH2 718 aa18.37■□□□□ 0.53
SCNN1A-214ENST00000539953 PLCH1Q4KWH8 1693 aa18.37■□□□□ 0.53
SCNN1A-214ENST00000539953 TNS3Q68CZ2 1445 aa18.36■□□□□ 0.53
SCNN1A-214ENST00000539953 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
SCNN1A-214ENST00000539953 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
SCNN1A-214ENST00000539953 SAFB2Q14151 953 aaKnown RBP eCLIP18.35■□□□□ 0.53
SCNN1A-214ENST00000539953 GJD4Q96KN9 370 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-214ENST00000539953 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
SCNN1A-214ENST00000539953 RALGAPBQ86X10 1494 aa18.34■□□□□ 0.53
SCNN1A-214ENST00000539953 SBNO1A3KN83 1393 aa18.33■□□□□ 0.53
SCNN1A-214ENST00000539953 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.52
SCNN1A-214ENST00000539953 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
SCNN1A-214ENST00000539953 ALS2Q96Q42 1657 aa18.32■□□□□ 0.52
SCNN1A-214ENST00000539953 CABLES1Q8TDN4 633 aa18.32■□□□□ 0.52
SCNN1A-214ENST00000539953 ARHGEF28Q8N1W1 1705 aaKnown RBP18.3■□□□□ 0.52
SCNN1A-214ENST00000539953 PSME1Q06323 249 aa18.3■□□□□ 0.52
SCNN1A-214ENST00000539953 POGKQ9P215 609 aa18.3■□□□□ 0.52
SCNN1A-214ENST00000539953 NRAPQ86VF7 1730 aa18.29■□□□□ 0.52
SCNN1A-214ENST00000539953 CRYBG1Q9Y4K1 1723 aa18.29■□□□□ 0.52
SCNN1A-214ENST00000539953 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
SCNN1A-214ENST00000539953 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
SCNN1A-214ENST00000539953 SRCAPQ6ZRS2 3230 aa18.28■□□□□ 0.52
SCNN1A-214ENST00000539953 ARHGEF10O15013 1369 aa18.28■□□□□ 0.52
SCNN1A-214ENST00000539953 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
SCNN1A-214ENST00000539953 PRR36Q9H6K5 1346 aa18.27■□□□□ 0.52
SCNN1A-214ENST00000539953 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
SCNN1A-214ENST00000539953 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.52
SCNN1A-214ENST00000539953 KDM2AQ9Y2K7 1162 aa18.27■□□□□ 0.52
SCNN1A-214ENST00000539953 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
SCNN1A-214ENST00000539953 PLEKHG5O94827 1062 aa18.25■□□□□ 0.51
SCNN1A-214ENST00000539953 VPS72Q15906 364 aa18.25■□□□□ 0.51
SCNN1A-214ENST00000539953 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
SCNN1A-214ENST00000539953 ITSN1Q15811 1721 aa18.24■□□□□ 0.51
SCNN1A-214ENST00000539953 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
SCNN1A-214ENST00000539953 HRCP23327 699 aa18.24■□□□□ 0.51
SCNN1A-214ENST00000539953 LMOD2Q6P5Q4 547 aa18.24■□□□□ 0.51
SCNN1A-214ENST00000539953 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
SCNN1A-214ENST00000539953 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
SCNN1A-214ENST00000539953 WASLO00401 505 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-214ENST00000539953 ONECUT3O60422 494 aaPredicted RBP18.22■□□□□ 0.51
SCNN1A-214ENST00000539953 EIF3AQ14152 1382 aaKnown RBP18.21■□□□□ 0.51
SCNN1A-214ENST00000539953 SEPT12Q8IYM1 358 aa18.21■□□□□ 0.51
SCNN1A-214ENST00000539953 STAC3Q96MF2 364 aa18.21■□□□□ 0.51
SCNN1A-214ENST00000539953 BLMP54132 1417 aaPredicted RBP18.21■□□□□ 0.51
SCNN1A-214ENST00000539953 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
SCNN1A-214ENST00000539953 ATP7BP35670 1465 aa18.2■□□□□ 0.5
SCNN1A-214ENST00000539953 TOPAZ1Q8N9V7 1692 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms