RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 NUP155O75694 1391 aa9.08□□□□□ -0.96
CPSF7-219ENST00000539952 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
CPSF7-219ENST00000539952 VGFO15240 615 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-219ENST00000539952 METP08581 1390 aa9.07□□□□□ -0.96
CPSF7-219ENST00000539952 PTCH1Q13635 1447 aa9.06□□□□□ -0.96
CPSF7-219ENST00000539952 FKBP8Q14318 412 aa9.06□□□□□ -0.96
CPSF7-219ENST00000539952 ADGRL3Q9HAR2 1447 aa9.05□□□□□ -0.96
CPSF7-219ENST00000539952 C1orf167Q5SNV9 1468 aa9.05□□□□□ -0.96
CPSF7-219ENST00000539952 C1QBPQ07021 282 aaKnown RBP9.05□□□□□ -0.96
CPSF7-219ENST00000539952 SF3B2Q13435 895 aaKnown RBP9.05□□□□□ -0.96
CPSF7-219ENST00000539952 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
CPSF7-219ENST00000539952 GCC2Q8IWJ2 1684 aa9.04□□□□□ -0.96
CPSF7-219ENST00000539952 ROCK1Q13464 1354 aa9.04□□□□□ -0.96
CPSF7-219ENST00000539952 ESCO1Q5FWF5 840 aa9.04□□□□□ -0.96
CPSF7-219ENST00000539952 ATRNO75882 1429 aa9.04□□□□□ -0.96
CPSF7-219ENST00000539952 MYO5BQ9ULV0 1848 aa9.03□□□□□ -0.96
CPSF7-219ENST00000539952 ABCB7O75027 752 aa9.03□□□□□ -0.96
CPSF7-219ENST00000539952 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
CPSF7-219ENST00000539952 UNC5CLQ8IV45 518 aa9.03□□□□□ -0.96
CPSF7-219ENST00000539952 RPGRIP1LQ68CZ1 1315 aa9.03□□□□□ -0.96
CPSF7-219ENST00000539952 LRPPRCP42704 1394 aaKnown RBP9.02□□□□□ -0.97
CPSF7-219ENST00000539952 FOXO3O43524 673 aa9.02□□□□□ -0.97
CPSF7-219ENST00000539952 NHSL1Q5SYE7 1610 aa9.02□□□□□ -0.97
CPSF7-219ENST00000539952 ONECUT3O60422 494 aaPredicted RBP9.01□□□□□ -0.97
CPSF7-219ENST00000539952 HRCP23327 699 aa9.01□□□□□ -0.97
CPSF7-219ENST00000539952 SETBP1Q9Y6X0 1596 aa9.01□□□□□ -0.97
CPSF7-219ENST00000539952 BCL9LQ86UU0 1499 aa9.01□□□□□ -0.97
CPSF7-219ENST00000539952 UNC13BO14795 1591 aa9□□□□□ -0.97
CPSF7-219ENST00000539952 BLMP54132 1417 aaPredicted RBP9□□□□□ -0.97
CPSF7-219ENST00000539952 POLA2Q14181 598 aa9□□□□□ -0.97
CPSF7-219ENST00000539952 ITGAEP38570 1179 aa8.99□□□□□ -0.97
CPSF7-219ENST00000539952 DEFB132Q7Z7B7 95 aa8.99□□□□□ -0.97
CPSF7-219ENST00000539952 E9PCH4 1651 aa8.99□□□□□ -0.97
CPSF7-219ENST00000539952 ROBO2Q9HCK4 1378 aa8.99□□□□□ -0.97
CPSF7-219ENST00000539952 HFM1A2PYH4 1435 aa8.98□□□□□ -0.97
CPSF7-219ENST00000539952 XRN1Q8IZH2 1706 aaKnown RBP8.98□□□□□ -0.97
CPSF7-219ENST00000539952 PSME1Q06323 249 aa8.98□□□□□ -0.97
CPSF7-219ENST00000539952 SEPT12Q8IYM1 358 aa8.98□□□□□ -0.97
CPSF7-219ENST00000539952 BAG6P46379 1132 aa8.97□□□□□ -0.97
CPSF7-219ENST00000539952 VPS72Q15906 364 aa8.97□□□□□ -0.97
CPSF7-219ENST00000539952 KRT28Q7Z3Y7 464 aa8.97□□□□□ -0.97
CPSF7-219ENST00000539952 KRT27Q7Z3Y8 459 aa8.97□□□□□ -0.97
CPSF7-219ENST00000539952 IQGAP3Q86VI3 1631 aa8.96□□□□□ -0.98
CPSF7-219ENST00000539952 HAP1P54257 671 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-219ENST00000539952 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
CPSF7-219ENST00000539952 SPATA31A3Q5VYP0 1347 aa8.96□□□□□ -0.98
CPSF7-219ENST00000539952 MYOM2P54296 1465 aa8.96□□□□□ -0.98
CPSF7-219ENST00000539952 LAMC1P11047 1609 aa8.95□□□□□ -0.98
CPSF7-219ENST00000539952 NRXN3Q9Y4C0 1643 aa8.95□□□□□ -0.98
CPSF7-219ENST00000539952 SIRT1Q96EB6 747 aa8.95□□□□□ -0.98
CPSF7-219ENST00000539952 CCDC9Q9Y3X0 531 aaKnown RBP8.95□□□□□ -0.98
CPSF7-219ENST00000539952 NUTM2FA1L443 756 aa8.94□□□□□ -0.98
CPSF7-219ENST00000539952 WAPLQ7Z5K2 1190 aa8.94□□□□□ -0.98
CPSF7-219ENST00000539952 STK26Q9P289 416 aa8.93□□□□□ -0.98
CPSF7-219ENST00000539952 PRAG1Q86YV5 1406 aa8.93□□□□□ -0.98
CPSF7-219ENST00000539952 RALGAPBQ86X10 1494 aa8.93□□□□□ -0.98
CPSF7-219ENST00000539952 SLIT2O94813 1529 aa8.93□□□□□ -0.98
CPSF7-219ENST00000539952 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-219ENST00000539952 PSDA5PKW4 1024 aaPredicted RBP8.92□□□□□ -0.98
CPSF7-219ENST00000539952 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
CPSF7-219ENST00000539952 NEXMIFQ5QGS0 1516 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 PXDNQ92626 1479 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 ABCC11Q96J66 1382 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 A0A0G2JS52 829 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 FAM83GA6ND36 823 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 MYT1Q01538 1121 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 NALCNQ8IZF0 1738 aa8.91□□□□□ -0.98
CPSF7-219ENST00000539952 DSG3P32926 999 aa8.9□□□□□ -0.98
CPSF7-219ENST00000539952 EN1Q05925 392 aaPredicted RBP8.9□□□□□ -0.98
CPSF7-219ENST00000539952 LMOD2Q6P5Q4 547 aa8.9□□□□□ -0.98
CPSF7-219ENST00000539952 CABLES1Q8TDN4 633 aa8.9□□□□□ -0.98
CPSF7-219ENST00000539952 CCDC144AA2RUR9 1427 aa8.89□□□□□ -0.99
CPSF7-219ENST00000539952 NAIPQ13075 1403 aa8.89□□□□□ -0.99
CPSF7-219ENST00000539952 RGL3Q3MIN7 710 aa8.89□□□□□ -0.99
CPSF7-219ENST00000539952 TMEM132EQ6IEE7 984 aa8.89□□□□□ -0.99
CPSF7-219ENST00000539952 ADGRF5Q8IZF2 1346 aa8.88□□□□□ -0.99
CPSF7-219ENST00000539952 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
CPSF7-219ENST00000539952 FAM98CQ17RN3 349 aaKnown RBP8.88□□□□□ -0.99
CPSF7-219ENST00000539952 BTG4Q9NY30 223 aa8.88□□□□□ -0.99
CPSF7-219ENST00000539952 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
CPSF7-219ENST00000539952 SBNO1A3KN83 1393 aa8.87□□□□□ -0.99
CPSF7-219ENST00000539952 ARHGEF10O15013 1369 aa8.87□□□□□ -0.99
CPSF7-219ENST00000539952 FAM196AQ6ZSG2 479 aa8.87□□□□□ -0.99
CPSF7-219ENST00000539952 KIF1BO60333 1816 aa8.87□□□□□ -0.99
CPSF7-219ENST00000539952 ANKRD30BQ9BXX2 1392 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 GLI3P10071 1580 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 PLEKHG5O94827 1062 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 YY1P25490 414 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 NBPF8Q3BBV2 869 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 NBPF14Q5TI25 921 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 C14orf93Q9H972 538 aaKnown RBP8.86□□□□□ -0.99
CPSF7-219ENST00000539952 TECPR2O15040 1411 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 CDC42BPGQ6DT37 1551 aa8.86□□□□□ -0.99
CPSF7-219ENST00000539952 CLTCL1P53675 1640 aa8.85□□□□□ -0.99
CPSF7-219ENST00000539952 CACNB1Q02641 598 aaPredicted RBP8.85□□□□□ -0.99
CPSF7-219ENST00000539952 EZH2Q15910 746 aaKnown RBP8.85□□□□□ -0.99
CPSF7-219ENST00000539952 CAMKK2Q96RR4 588 aa8.85□□□□□ -0.99
CPSF7-219ENST00000539952 TNS3Q68CZ2 1445 aa8.85□□□□□ -0.99
CPSF7-219ENST00000539952 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
CPSF7-219ENST00000539952 MARF1Q9Y4F3 1742 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms