RNA–Protein interactions for RNA: ENST00000539928.1

PHC1-207, Transcript of polyhomeotic homolog 1, humanhuman

TSL 4

Gene PHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-207ENST00000539928 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
PHC1-207ENST00000539928 ZNF772Q68DY9 489 aaPredicted RBP13.62□□□□□ -0.23
PHC1-207ENST00000539928 TMEM132EQ6IEE7 984 aa13.62□□□□□ -0.23
PHC1-207ENST00000539928 WAPLQ7Z5K2 1190 aa13.61□□□□□ -0.23
PHC1-207ENST00000539928 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
PHC1-207ENST00000539928 PNPLA6Q8IY17 1366 aa13.6□□□□□ -0.23
PHC1-207ENST00000539928 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
PHC1-207ENST00000539928 TECPR2O15040 1411 aa13.59□□□□□ -0.23
PHC1-207ENST00000539928 SOS2Q07890 1332 aaPredicted RBP13.59□□□□□ -0.23
PHC1-207ENST00000539928 ABCC11Q96J66 1382 aa13.58□□□□□ -0.23
PHC1-207ENST00000539928 LAMC1P11047 1609 aa13.58□□□□□ -0.24
PHC1-207ENST00000539928 AFF2P51816 1311 aa13.58□□□□□ -0.24
PHC1-207ENST00000539928 CDC42BPGQ6DT37 1551 aa13.58□□□□□ -0.24
PHC1-207ENST00000539928 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.24
PHC1-207ENST00000539928 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
PHC1-207ENST00000539928 ESCO1Q5FWF5 840 aa13.57□□□□□ -0.24
PHC1-207ENST00000539928 C8orf37Q96NL8 207 aa13.57□□□□□ -0.24
PHC1-207ENST00000539928 YTHDC2Q9H6S0 1430 aaKnown RBP13.56□□□□□ -0.24
PHC1-207ENST00000539928 CFAP70Q5T0N1 1121 aa13.56□□□□□ -0.24
PHC1-207ENST00000539928 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
PHC1-207ENST00000539928 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
PHC1-207ENST00000539928 ADAMTS2O95450 1211 aa13.55□□□□□ -0.24
PHC1-207ENST00000539928 RXRBP28702 533 aa13.55□□□□□ -0.24
PHC1-207ENST00000539928 MYOM2P54296 1465 aa13.55□□□□□ -0.24
PHC1-207ENST00000539928 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
PHC1-207ENST00000539928 FOXO3O43524 673 aa13.54□□□□□ -0.24
PHC1-207ENST00000539928 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
PHC1-207ENST00000539928 NGLY1Q96IV0 654 aa13.53□□□□□ -0.24
PHC1-207ENST00000539928 NPHP3Q7Z494 1330 aa13.53□□□□□ -0.24
PHC1-207ENST00000539928 SIRT1Q96EB6 747 aa13.52□□□□□ -0.25
PHC1-207ENST00000539928 RNF39Q9H2S5 420 aa13.52□□□□□ -0.25
PHC1-207ENST00000539928 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
PHC1-207ENST00000539928 PXDNQ92626 1479 aa13.52□□□□□ -0.25
PHC1-207ENST00000539928 FMN2Q9NZ56 1722 aa13.51□□□□□ -0.25
PHC1-207ENST00000539928 QTRT2Q9H974 415 aaKnown RBP13.51□□□□□ -0.25
PHC1-207ENST00000539928 SAFB2Q14151 953 aaKnown RBP eCLIP13.5□□□□□ -0.25
PHC1-207ENST00000539928 PRAM1Q96QH2 718 aa13.5□□□□□ -0.25
PHC1-207ENST00000539928 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
PHC1-207ENST00000539928 COL22A1Q8NFW1 1626 aaPredicted RBP13.5□□□□□ -0.25
PHC1-207ENST00000539928 HRCP23327 699 aa13.49□□□□□ -0.25
PHC1-207ENST00000539928 CDK12Q9NYV4 1490 aaPredicted RBP13.48□□□□□ -0.25
PHC1-207ENST00000539928 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
PHC1-207ENST00000539928 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
PHC1-207ENST00000539928 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
PHC1-207ENST00000539928 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.25
PHC1-207ENST00000539928 POGKQ9P215 609 aa13.47□□□□□ -0.25
PHC1-207ENST00000539928 USP21Q9UK80 565 aa13.47□□□□□ -0.25
PHC1-207ENST00000539928 ADGRB1O14514 1584 aa13.46□□□□□ -0.25
PHC1-207ENST00000539928 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
PHC1-207ENST00000539928 KRT28Q7Z3Y7 464 aa13.46□□□□□ -0.25
PHC1-207ENST00000539928 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
PHC1-207ENST00000539928 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
PHC1-207ENST00000539928 TRAK1Q9UPV9 953 aa13.46□□□□□ -0.25
PHC1-207ENST00000539928 KIF1AQ12756 1690 aa13.46□□□□□ -0.26
PHC1-207ENST00000539928 RGS12O14924 1447 aa13.46□□□□□ -0.26
PHC1-207ENST00000539928 SPATA31A3Q5VYP0 1347 aa13.45□□□□□ -0.26
PHC1-207ENST00000539928 DLC1Q96QB1 1528 aa13.45□□□□□ -0.26
PHC1-207ENST00000539928 TRPC5Q9UL62 973 aaPredicted RBP13.44□□□□□ -0.26
PHC1-207ENST00000539928 HIRIP3Q9BW71 556 aaPredicted RBP13.43□□□□□ -0.26
PHC1-207ENST00000539928 MARF1Q9Y4F3 1742 aaKnown RBP13.43□□□□□ -0.26
PHC1-207ENST00000539928 MINK1Q8N4C8 1332 aaPredicted RBP13.42□□□□□ -0.26
PHC1-207ENST00000539928 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
PHC1-207ENST00000539928 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
PHC1-207ENST00000539928 BCL9LQ86UU0 1499 aa13.42□□□□□ -0.26
PHC1-207ENST00000539928 ATRNO75882 1429 aa13.41□□□□□ -0.26
PHC1-207ENST00000539928 PLEKHG5O94827 1062 aa13.41□□□□□ -0.26
PHC1-207ENST00000539928 PSME1Q06323 249 aa13.41□□□□□ -0.26
PHC1-207ENST00000539928 PMFBP1Q8TBY8 1022 aa13.41□□□□□ -0.26
PHC1-207ENST00000539928 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
PHC1-207ENST00000539928 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
PHC1-207ENST00000539928 ANKARQ7Z5J8 1434 aa13.4□□□□□ -0.26
PHC1-207ENST00000539928 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
PHC1-207ENST00000539928 ADGRB2O60241 1585 aa13.4□□□□□ -0.26
PHC1-207ENST00000539928 LMOD2Q6P5Q4 547 aa13.39□□□□□ -0.27
PHC1-207ENST00000539928 PRR36Q9H6K5 1346 aa13.39□□□□□ -0.27
PHC1-207ENST00000539928 SBNO1A3KN83 1393 aa13.38□□□□□ -0.27
PHC1-207ENST00000539928 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
PHC1-207ENST00000539928 HAP1P54257 671 aaPredicted RBP13.38□□□□□ -0.27
PHC1-207ENST00000539928 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
PHC1-207ENST00000539928 ARHGEF28Q8N1W1 1705 aaKnown RBP13.36□□□□□ -0.27
PHC1-207ENST00000539928 SLIT2O94813 1529 aa13.36□□□□□ -0.27
PHC1-207ENST00000539928 TULP4Q9NRJ4 1543 aa13.36□□□□□ -0.27
PHC1-207ENST00000539928 UNC5CLQ8IV45 518 aa13.36□□□□□ -0.27
PHC1-207ENST00000539928 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
PHC1-207ENST00000539928 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
PHC1-207ENST00000539928 ATAD2Q6PL18 1390 aa13.35□□□□□ -0.27
PHC1-207ENST00000539928 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.35□□□□□ -0.27
PHC1-207ENST00000539928 GPRASP1Q5JY77 1395 aa13.34□□□□□ -0.27
PHC1-207ENST00000539928 ABCA3Q99758 1704 aa13.33□□□□□ -0.27
PHC1-207ENST00000539928 TRPM3Q9HCF6 1732 aaPredicted RBP13.33□□□□□ -0.27
PHC1-207ENST00000539928 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
PHC1-207ENST00000539928 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
PHC1-207ENST00000539928 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
PHC1-207ENST00000539928 FAM83GA6ND36 823 aa13.32□□□□□ -0.28
PHC1-207ENST00000539928 NUDT16Q96DE0 195 aaKnown RBP13.32□□□□□ -0.28
PHC1-207ENST00000539928 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
PHC1-207ENST00000539928 GLI3P10071 1580 aa13.32□□□□□ -0.28
PHC1-207ENST00000539928 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
PHC1-207ENST00000539928 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
PHC1-207ENST00000539928 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms