RNA–Protein interactions for RNA: ENST00000539859.1

LRTM2-203, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 540 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-203ENST00000539859 SOS2Q07890 1332 aaPredicted RBP22.7■■□□□ 1.22
LRTM2-203ENST00000539859 COL22A1Q8NFW1 1626 aaPredicted RBP22.69■■□□□ 1.22
LRTM2-203ENST00000539859 DEFB132Q7Z7B7 95 aa22.68■■□□□ 1.22
LRTM2-203ENST00000539859 GJD4Q96KN9 370 aaPredicted RBP22.68■■□□□ 1.22
LRTM2-203ENST00000539859 RAB3GAP2Q9H2M9 1393 aa22.67■■□□□ 1.22
LRTM2-203ENST00000539859 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
LRTM2-203ENST00000539859 METP08581 1390 aa22.65■■□□□ 1.22
LRTM2-203ENST00000539859 MYOM2P54296 1465 aa22.65■■□□□ 1.22
LRTM2-203ENST00000539859 SLC4A1APQ9BWU0 796 aaKnown RBP22.64■■□□□ 1.21
LRTM2-203ENST00000539859 MARF1Q9Y4F3 1742 aaKnown RBP22.63■■□□□ 1.21
LRTM2-203ENST00000539859 SPHKAPQ2M3C7 1700 aa22.62■■□□□ 1.21
LRTM2-203ENST00000539859 ORAI2Q96SN7 254 aa22.62■■□□□ 1.21
LRTM2-203ENST00000539859 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.61■■□□□ 1.21
LRTM2-203ENST00000539859 PSDA5PKW4 1024 aaPredicted RBP22.59■■□□□ 1.21
LRTM2-203ENST00000539859 ZNF326Q5BKZ1 582 aaKnown RBP22.59■■□□□ 1.21
LRTM2-203ENST00000539859 RALGAPBQ86X10 1494 aa22.59■■□□□ 1.21
LRTM2-203ENST00000539859 GLI3P10071 1580 aa22.57■■□□□ 1.2
LRTM2-203ENST00000539859 NPHP3Q7Z494 1330 aa22.57■■□□□ 1.2
LRTM2-203ENST00000539859 MPHOSPH9Q99550 1183 aa22.56■■□□□ 1.2
LRTM2-203ENST00000539859 BRWD3Q6RI45 1802 aa22.55■■□□□ 1.2
LRTM2-203ENST00000539859 CLTCL1P53675 1640 aa22.55■■□□□ 1.2
LRTM2-203ENST00000539859 CLSPNQ9HAW4 1339 aa22.55■■□□□ 1.2
LRTM2-203ENST00000539859 UNC5CLQ8IV45 518 aa22.54■■□□□ 1.2
LRTM2-203ENST00000539859 BAG6P46379 1132 aa22.52■■□□□ 1.2
LRTM2-203ENST00000539859 ZEB1P37275 1124 aaPredicted RBP22.51■■□□□ 1.19
LRTM2-203ENST00000539859 PXDNQ92626 1479 aa22.5■■□□□ 1.19
LRTM2-203ENST00000539859 SEPT12Q8IYM1 358 aa22.5■■□□□ 1.19
LRTM2-203ENST00000539859 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
LRTM2-203ENST00000539859 SLIT2O94813 1529 aa22.49■■□□□ 1.19
LRTM2-203ENST00000539859 ESCO1Q5FWF5 840 aa22.48■■□□□ 1.19
LRTM2-203ENST00000539859 YY1P25490 414 aa22.47■■□□□ 1.19
LRTM2-203ENST00000539859 ROBO2Q9HCK4 1378 aa22.47■■□□□ 1.19
LRTM2-203ENST00000539859 XPCQ01831 940 aaPredicted RBP22.46■■□□□ 1.19
LRTM2-203ENST00000539859 KRT27Q7Z3Y8 459 aa22.46■■□□□ 1.19
LRTM2-203ENST00000539859 LRPPRCP42704 1394 aaKnown RBP22.46■■□□□ 1.19
LRTM2-203ENST00000539859 NEXMIFQ5QGS0 1516 aa22.46■■□□□ 1.19
LRTM2-203ENST00000539859 CCDC9Q9Y3X0 531 aaKnown RBP22.44■■□□□ 1.18
LRTM2-203ENST00000539859 USP32Q8NFA0 1604 aa22.43■■□□□ 1.18
LRTM2-203ENST00000539859 CDC42BPGQ6DT37 1551 aa22.43■■□□□ 1.18
LRTM2-203ENST00000539859 A0A0G2JS52 829 aa22.43■■□□□ 1.18
LRTM2-203ENST00000539859 FOXO3O43524 673 aa22.43■■□□□ 1.18
LRTM2-203ENST00000539859 MYT1Q01538 1121 aa22.43■■□□□ 1.18
LRTM2-203ENST00000539859 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
LRTM2-203ENST00000539859 KIF1BO60333 1816 aa22.41■■□□□ 1.18
LRTM2-203ENST00000539859 HAP1P54257 671 aaPredicted RBP22.41■■□□□ 1.18
LRTM2-203ENST00000539859 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
LRTM2-203ENST00000539859 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
LRTM2-203ENST00000539859 VPS72Q15906 364 aa22.4■■□□□ 1.18
LRTM2-203ENST00000539859 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
LRTM2-203ENST00000539859 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
LRTM2-203ENST00000539859 PLCH1Q4KWH8 1693 aa22.36■■□□□ 1.17
LRTM2-203ENST00000539859 NWD2Q9ULI1 1742 aa22.35■■□□□ 1.17
LRTM2-203ENST00000539859 EN1Q05925 392 aaPredicted RBP22.35■■□□□ 1.17
LRTM2-203ENST00000539859 ONECUT3O60422 494 aaPredicted RBP22.34■■□□□ 1.17
LRTM2-203ENST00000539859 SPATA31A3Q5VYP0 1347 aa22.33■■□□□ 1.17
LRTM2-203ENST00000539859 ANKRD30BQ9BXX2 1392 aa22.32■■□□□ 1.16
LRTM2-203ENST00000539859 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
LRTM2-203ENST00000539859 VGFO15240 615 aaPredicted RBP22.31■■□□□ 1.16
LRTM2-203ENST00000539859 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
LRTM2-203ENST00000539859 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
LRTM2-203ENST00000539859 KIF1AQ12756 1690 aa22.3■■□□□ 1.16
LRTM2-203ENST00000539859 DCAF8L1A6NGE4 600 aa22.29■■□□□ 1.16
LRTM2-203ENST00000539859 PLEKHG5O94827 1062 aa22.28■■□□□ 1.16
LRTM2-203ENST00000539859 DISP2A7MBM2 1401 aa22.27■■□□□ 1.16
LRTM2-203ENST00000539859 PPLO60437 1756 aa22.27■■□□□ 1.16
LRTM2-203ENST00000539859 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
LRTM2-203ENST00000539859 TNS3Q68CZ2 1445 aa22.26■■□□□ 1.15
LRTM2-203ENST00000539859 FAM98CQ17RN3 349 aaKnown RBP22.26■■□□□ 1.15
LRTM2-203ENST00000539859 KRT28Q7Z3Y7 464 aa22.25■■□□□ 1.15
LRTM2-203ENST00000539859 TNS1Q9HBL0 1735 aaKnown RBP22.24■■□□□ 1.15
LRTM2-203ENST00000539859 CABLES1Q8TDN4 633 aa22.23■■□□□ 1.15
LRTM2-203ENST00000539859 RPGRIP1LQ68CZ1 1315 aa22.23■■□□□ 1.15
LRTM2-203ENST00000539859 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
LRTM2-203ENST00000539859 EZH2Q15910 746 aaKnown RBP22.22■■□□□ 1.15
LRTM2-203ENST00000539859 IFT172Q9UG01 1749 aa22.22■■□□□ 1.15
LRTM2-203ENST00000539859 PPP1R1BQ9UD71 204 aaPredicted RBP22.21■■□□□ 1.15
LRTM2-203ENST00000539859 FMN2Q9NZ56 1722 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 PSME1Q06323 249 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 FAM182BQ5T319 152 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 LMOD2Q6P5Q4 547 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 NRAPQ86VF7 1730 aa22.2■■□□□ 1.14
LRTM2-203ENST00000539859 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
LRTM2-203ENST00000539859 ARHGEF10O15013 1369 aa22.18■■□□□ 1.14
LRTM2-203ENST00000539859 PARD3Q8TEW0 1356 aa22.17■■□□□ 1.14
LRTM2-203ENST00000539859 FAM83GA6ND36 823 aa22.15■■□□□ 1.14
LRTM2-203ENST00000539859 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
LRTM2-203ENST00000539859 STK26Q9P289 416 aa22.15■■□□□ 1.14
LRTM2-203ENST00000539859 TECPR2O15040 1411 aa22.14■■□□□ 1.14
LRTM2-203ENST00000539859 NINLQ9Y2I6 1382 aa22.14■■□□□ 1.14
LRTM2-203ENST00000539859 BTG4Q9NY30 223 aa22.14■■□□□ 1.13
LRTM2-203ENST00000539859 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
LRTM2-203ENST00000539859 CAMKK2Q96RR4 588 aa22.13■■□□□ 1.13
LRTM2-203ENST00000539859 PHF8Q9UPP1 1060 aa22.13■■□□□ 1.13
LRTM2-203ENST00000539859 THSD7AQ9UPZ6 1657 aa22.11■■□□□ 1.13
LRTM2-203ENST00000539859 SENP3-EIF4A1A0A087X0R7 540 aa22.11■■□□□ 1.13
LRTM2-203ENST00000539859 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
LRTM2-203ENST00000539859 NBPF14Q5TI25 921 aa22.11■■□□□ 1.13
LRTM2-203ENST00000539859 COL14A1Q05707 1796 aaKnown RBP22.11■■□□□ 1.13
LRTM2-203ENST00000539859 PIK3C2GO75747 1445 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms