RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 NUTM2GQ5VZR2 741 aa10.82□□□□□ -0.68
GNE-205ENST00000539815 STK32BQ9NY57 414 aa10.81□□□□□ -0.68
GNE-205ENST00000539815 SYNMO15061 1565 aa10.81□□□□□ -0.68
GNE-205ENST00000539815 TRIM37O94972 964 aa10.81□□□□□ -0.68
GNE-205ENST00000539815 PNPLA6Q8IY17 1366 aa10.8□□□□□ -0.68
GNE-205ENST00000539815 TOM1L2Q6ZVM7 507 aa10.8□□□□□ -0.68
GNE-205ENST00000539815 C11orf95C9JLR9 678 aaPredicted RBP10.79□□□□□ -0.68
GNE-205ENST00000539815 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
GNE-205ENST00000539815 VWDEQ8N2E2 1590 aa10.79□□□□□ -0.68
GNE-205ENST00000539815 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
GNE-205ENST00000539815 FNBP4Q8N3X1 1017 aaPredicted RBP10.79□□□□□ -0.68
GNE-205ENST00000539815 ABTB2Q8N961 1025 aa10.79□□□□□ -0.68
GNE-205ENST00000539815 PLXNC1O60486 1568 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 SIGLEC1Q9BZZ2 1709 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 EIF3AQ14152 1382 aaKnown RBP10.78□□□□□ -0.68
GNE-205ENST00000539815 POLD1P28340 1107 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
GNE-205ENST00000539815 ZNF142P52746 1687 aaPredicted RBP10.78□□□□□ -0.68
GNE-205ENST00000539815 ARHGEF10O15013 1369 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 DEPDC5O75140 1603 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 NLRP13Q86W25 1043 aa10.78□□□□□ -0.68
GNE-205ENST00000539815 ANO8Q9HCE9 1232 aaPredicted RBP10.78□□□□□ -0.68
GNE-205ENST00000539815 ARHGAP23Q9P227 1491 aa10.77□□□□□ -0.68
GNE-205ENST00000539815 CHRNA2Q15822 529 aa10.77□□□□□ -0.69
GNE-205ENST00000539815 GTF3C3Q9Y5Q9 886 aa10.77□□□□□ -0.69
GNE-205ENST00000539815 BLMP54132 1417 aaPredicted RBP10.77□□□□□ -0.69
GNE-205ENST00000539815 ADGRL3Q9HAR2 1447 aa10.77□□□□□ -0.69
GNE-205ENST00000539815 VPS72Q15906 364 aa10.76□□□□□ -0.69
GNE-205ENST00000539815 SLIT1O75093 1534 aa10.76□□□□□ -0.69
GNE-205ENST00000539815 PTCH1Q13635 1447 aa10.76□□□□□ -0.69
GNE-205ENST00000539815 TRPM2O94759 1503 aa10.76□□□□□ -0.69
GNE-205ENST00000539815 SYTL4Q96C24 671 aaPredicted RBP10.76□□□□□ -0.69
GNE-205ENST00000539815 PHLPP1O60346 1717 aa10.75□□□□□ -0.69
GNE-205ENST00000539815 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
GNE-205ENST00000539815 NEURL4Q96JN8 1562 aa10.75□□□□□ -0.69
GNE-205ENST00000539815 DCCP43146 1447 aa10.74□□□□□ -0.69
GNE-205ENST00000539815 SOS2Q07890 1332 aaPredicted RBP10.74□□□□□ -0.69
GNE-205ENST00000539815 ROBO1Q9Y6N7 1651 aa10.74□□□□□ -0.69
GNE-205ENST00000539815 HMGB2P26583 209 aaKnown RBP10.74□□□□□ -0.69
GNE-205ENST00000539815 NLRP6P59044 892 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 ANKRD30BQ9BXX2 1392 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 NOS1P29475 1434 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 SETD5Q9C0A6 1442 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 DDB1Q16531 1140 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 METP08581 1390 aa10.73□□□□□ -0.69
GNE-205ENST00000539815 ADGRB3O60242 1522 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 NEUROD1Q13562 356 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 ANP32EQ9BTT0 268 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 C1orf167Q5SNV9 1468 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 TMC1Q8TDI8 760 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 SPATA31A3Q5VYP0 1347 aa10.72□□□□□ -0.69
GNE-205ENST00000539815 EXOC5O00471 708 aa10.71□□□□□ -0.69
GNE-205ENST00000539815 CFAP70Q5T0N1 1121 aa10.71□□□□□ -0.69
GNE-205ENST00000539815 ATF5Q9Y2D1 282 aaPredicted RBP10.71□□□□□ -0.69
GNE-205ENST00000539815 EZH2Q15910 746 aaKnown RBP10.71□□□□□ -0.7
GNE-205ENST00000539815 NLRP2Q9NX02 1062 aa10.71□□□□□ -0.7
GNE-205ENST00000539815 ZC3H13Q5T200 1668 aaKnown RBP10.7□□□□□ -0.7
GNE-205ENST00000539815 PTPN23Q9H3S7 1636 aa10.7□□□□□ -0.7
GNE-205ENST00000539815 CDK12Q9NYV4 1490 aaPredicted RBP10.7□□□□□ -0.7
GNE-205ENST00000539815 RGS12O14924 1447 aa10.7□□□□□ -0.7
GNE-205ENST00000539815 NPM2Q86SE8 214 aaKnown RBP10.69□□□□□ -0.7
GNE-205ENST00000539815 PIK3C2BO00750 1634 aa10.69□□□□□ -0.7
GNE-205ENST00000539815 TCP11L2Q8N4U5 519 aa10.69□□□□□ -0.7
GNE-205ENST00000539815 MPHOSPH9Q99550 1183 aa10.69□□□□□ -0.7
GNE-205ENST00000539815 PCGF6Q9BYE7 350 aa10.69□□□□□ -0.7
GNE-205ENST00000539815 ZBTB7AO95365 584 aa10.68□□□□□ -0.7
GNE-205ENST00000539815 MST1RQ04912 1400 aa10.68□□□□□ -0.7
GNE-205ENST00000539815 KCNQ2O43526 872 aa10.68□□□□□ -0.7
GNE-205ENST00000539815 POLR3GLQ9BT43 218 aa10.68□□□□□ -0.7
GNE-205ENST00000539815 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
GNE-205ENST00000539815 RRBP1Q9P2E9 1410 aaKnown RBP10.67□□□□□ -0.7
GNE-205ENST00000539815 EIF2AK4Q9P2K8 1649 aaKnown RBP10.67□□□□□ -0.7
GNE-205ENST00000539815 ROCK1Q13464 1354 aa10.66□□□□□ -0.7
GNE-205ENST00000539815 CEP152O94986 1710 aa10.66□□□□□ -0.7
GNE-205ENST00000539815 KAT6BQ8WYB5 2073 aa10.66□□□□□ -0.7
GNE-205ENST00000539815 NAIPQ13075 1403 aa10.66□□□□□ -0.7
GNE-205ENST00000539815 ADAMTS13Q76LX8 1427 aa10.66□□□□□ -0.7
GNE-205ENST00000539815 GIGYF1O75420 1035 aaPredicted RBP10.66□□□□□ -0.7
GNE-205ENST00000539815 FAM83GA6ND36 823 aa10.65□□□□□ -0.7
GNE-205ENST00000539815 ADGRF5Q8IZF2 1346 aa10.65□□□□□ -0.7
GNE-205ENST00000539815 C16orf71Q8IYS4 520 aaPredicted RBP10.65□□□□□ -0.7
GNE-205ENST00000539815 NUDT16Q96DE0 195 aaKnown RBP10.65□□□□□ -0.7
GNE-205ENST00000539815 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
GNE-205ENST00000539815 ROBO2Q9HCK4 1378 aa10.65□□□□□ -0.7
GNE-205ENST00000539815 LTV1Q96GA3 475 aaPredicted RBP10.64□□□□□ -0.71
GNE-205ENST00000539815 LRP6O75581 1613 aa10.64□□□□□ -0.71
GNE-205ENST00000539815 ASXL1Q8IXJ9 1541 aa10.64□□□□□ -0.71
GNE-205ENST00000539815 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
GNE-205ENST00000539815 TFCP2L1Q9NZI6 479 aa10.63□□□□□ -0.71
GNE-205ENST00000539815 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
GNE-205ENST00000539815 WASLO00401 505 aaPredicted RBP10.63□□□□□ -0.71
GNE-205ENST00000539815 HDGFL2Q7Z4V5 671 aaPredicted RBP10.62□□□□□ -0.71
GNE-205ENST00000539815 STAC3Q96MF2 364 aa10.62□□□□□ -0.71
GNE-205ENST00000539815 UBR1Q8IWV7 1749 aa10.62□□□□□ -0.71
GNE-205ENST00000539815 ZFYVE9O95405 1425 aa10.62□□□□□ -0.71
GNE-205ENST00000539815 DDX54Q8TDD1 881 aaKnown RBP10.62□□□□□ -0.71
GNE-205ENST00000539815 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms