RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CANXP27824 592 aaKnown RBP18.3■□□□□ 0.52
UBE3B-210ENST00000539599 QRICH2Q9H0J4 1663 aa18.3■□□□□ 0.52
UBE3B-210ENST00000539599 C8orf34Q49A92 452 aa18.3■□□□□ 0.52
UBE3B-210ENST00000539599 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
UBE3B-210ENST00000539599 SIGLEC1Q9BZZ2 1709 aa18.29■□□□□ 0.52
UBE3B-210ENST00000539599 RTL5Q5HYW3 569 aaPredicted RBP18.29■□□□□ 0.52
UBE3B-210ENST00000539599 CLUAP1Q96AJ1 413 aa18.29■□□□□ 0.52
UBE3B-210ENST00000539599 IDI1Q13907 227 aa18.28■□□□□ 0.52
UBE3B-210ENST00000539599 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
UBE3B-210ENST00000539599 PPLO60437 1756 aa18.27■□□□□ 0.52
UBE3B-210ENST00000539599 NEFMP07197 916 aa18.27■□□□□ 0.52
UBE3B-210ENST00000539599 ABCC3O15438 1527 aa18.26■□□□□ 0.51
UBE3B-210ENST00000539599 LMTK2Q8IWU2 1503 aa18.26■□□□□ 0.51
UBE3B-210ENST00000539599 POLR3AO14802 1390 aaPredicted RBP18.26■□□□□ 0.51
UBE3B-210ENST00000539599 RLBP1P12271 317 aa18.26■□□□□ 0.51
UBE3B-210ENST00000539599 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
UBE3B-210ENST00000539599 SHPRHQ149N8 1683 aa18.26■□□□□ 0.51
UBE3B-210ENST00000539599 MYO3AQ8NEV4 1616 aa18.25■□□□□ 0.51
UBE3B-210ENST00000539599 MINK1Q8N4C8 1332 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-210ENST00000539599 U2AF1L5P0DN76 240 aaPredicted RBP18.25■□□□□ 0.51
UBE3B-210ENST00000539599 U2AF1Q01081 240 aaKnown RBP eCLIP18.25■□□□□ 0.51
UBE3B-210ENST00000539599 FBLN1P23142 703 aa18.24■□□□□ 0.51
UBE3B-210ENST00000539599 NEURL4Q96JN8 1562 aa18.24■□□□□ 0.51
UBE3B-210ENST00000539599 SBNO2Q9Y2G9 1366 aa18.24■□□□□ 0.51
UBE3B-210ENST00000539599 HECW2Q9P2P5 1572 aa18.24■□□□□ 0.51
UBE3B-210ENST00000539599 FBXO31Q5XUX0 539 aaPredicted RBP18.24■□□□□ 0.51
UBE3B-210ENST00000539599 SRPK2P78362 688 aaKnown RBP18.23■□□□□ 0.51
UBE3B-210ENST00000539599 RUNDC1Q96C34 613 aa18.23■□□□□ 0.51
UBE3B-210ENST00000539599 YEATS2Q9ULM3 1422 aa18.23■□□□□ 0.51
UBE3B-210ENST00000539599 TULP4Q9NRJ4 1543 aa18.23■□□□□ 0.51
UBE3B-210ENST00000539599 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
UBE3B-210ENST00000539599 FAM161AQ3B820 660 aa18.22■□□□□ 0.51
UBE3B-210ENST00000539599 ZC3H13Q5T200 1668 aaKnown RBP18.22■□□□□ 0.51
UBE3B-210ENST00000539599 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
UBE3B-210ENST00000539599 GLI2P10070 1586 aa18.22■□□□□ 0.51
UBE3B-210ENST00000539599 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
UBE3B-210ENST00000539599 U2SURPO15042 1029 aaKnown RBP18.21■□□□□ 0.51
UBE3B-210ENST00000539599 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
UBE3B-210ENST00000539599 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
UBE3B-210ENST00000539599 SEC24BO95487 1268 aa18.2■□□□□ 0.5
UBE3B-210ENST00000539599 EVC2Q86UK5 1308 aa18.19■□□□□ 0.5
UBE3B-210ENST00000539599 CAMSAP1Q5T5Y3 1602 aa18.19■□□□□ 0.5
UBE3B-210ENST00000539599 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
UBE3B-210ENST00000539599 SLC24A1O60721 1099 aa18.18■□□□□ 0.5
UBE3B-210ENST00000539599 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
UBE3B-210ENST00000539599 A0A1W2PP64 1363 aa18.18■□□□□ 0.5
UBE3B-210ENST00000539599 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
UBE3B-210ENST00000539599 NEXMIFQ5QGS0 1516 aa18.17■□□□□ 0.5
UBE3B-210ENST00000539599 IQSEC2Q5JU85 1478 aa18.16■□□□□ 0.5
UBE3B-210ENST00000539599 ARHGEF28Q8N1W1 1705 aaKnown RBP18.16■□□□□ 0.5
UBE3B-210ENST00000539599 MYO5BQ9ULV0 1848 aa18.15■□□□□ 0.5
UBE3B-210ENST00000539599 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
UBE3B-210ENST00000539599 DIP2CQ9Y2E4 1556 aa18.14■□□□□ 0.5
UBE3B-210ENST00000539599 ANKRD36BQ8N2N9 1353 aa18.14■□□□□ 0.49
UBE3B-210ENST00000539599 RPGRIP1LQ68CZ1 1315 aa18.14■□□□□ 0.49
UBE3B-210ENST00000539599 CYB5RLQ6IPT4 315 aa18.14■□□□□ 0.49
UBE3B-210ENST00000539599 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
UBE3B-210ENST00000539599 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
UBE3B-210ENST00000539599 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
UBE3B-210ENST00000539599 POGKQ9P215 609 aa18.13■□□□□ 0.49
UBE3B-210ENST00000539599 MLECQ14165 292 aa18.12■□□□□ 0.49
UBE3B-210ENST00000539599 PIK3C2BO00750 1634 aa18.12■□□□□ 0.49
UBE3B-210ENST00000539599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
UBE3B-210ENST00000539599 DDRGK1Q96HY6 314 aa18.11■□□□□ 0.49
UBE3B-210ENST00000539599 FYB1O15117 783 aa18.1■□□□□ 0.49
UBE3B-210ENST00000539599 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
UBE3B-210ENST00000539599 EXOSC9Q06265 439 aaKnown RBP18.1■□□□□ 0.49
UBE3B-210ENST00000539599 DAXXQ9UER7 740 aaPredicted RBP18.1■□□□□ 0.49
UBE3B-210ENST00000539599 USP19O94966 1318 aa18.1■□□□□ 0.49
UBE3B-210ENST00000539599 NFKBIBQ15653 356 aa18.09■□□□□ 0.49
UBE3B-210ENST00000539599 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
UBE3B-210ENST00000539599 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
UBE3B-210ENST00000539599 WDR63Q8IWG1 891 aa18.08■□□□□ 0.48
UBE3B-210ENST00000539599 STAG3Q9UJ98 1225 aa18.08■□□□□ 0.48
UBE3B-210ENST00000539599 TRIM35Q9UPQ4 493 aa18.08■□□□□ 0.48
UBE3B-210ENST00000539599 PDZRN3Q9UPQ7 1066 aa18.07■□□□□ 0.48
UBE3B-210ENST00000539599 PLEKHF1Q96S99 279 aa18.06■□□□□ 0.48
UBE3B-210ENST00000539599 CDK19Q9BWU1 502 aa18.06■□□□□ 0.48
UBE3B-210ENST00000539599 TMPOP42166 694 aaKnown RBP18.06■□□□□ 0.48
UBE3B-210ENST00000539599 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
UBE3B-210ENST00000539599 RTN4Q9NQC3 1192 aaKnown RBP18.05■□□□□ 0.48
UBE3B-210ENST00000539599 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
UBE3B-210ENST00000539599 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
UBE3B-210ENST00000539599 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
UBE3B-210ENST00000539599 PTPRMP28827 1452 aa18.04■□□□□ 0.48
UBE3B-210ENST00000539599 NGEFQ8N5V2 710 aa18.04■□□□□ 0.48
UBE3B-210ENST00000539599 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
UBE3B-210ENST00000539599 CD163L1Q9NR16 1453 aa18.04■□□□□ 0.48
UBE3B-210ENST00000539599 FRAT2O75474 233 aaPredicted RBP18.04■□□□□ 0.48
UBE3B-210ENST00000539599 SSH1Q8WYL5 1049 aa18.04■□□□□ 0.48
UBE3B-210ENST00000539599 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
UBE3B-210ENST00000539599 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
UBE3B-210ENST00000539599 ZRANB1Q9UGI0 708 aa18.03■□□□□ 0.48
UBE3B-210ENST00000539599 RICTORQ6R327 1708 aa18.03■□□□□ 0.48
UBE3B-210ENST00000539599 NEO1Q92859 1461 aa18.03■□□□□ 0.48
UBE3B-210ENST00000539599 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
UBE3B-210ENST00000539599 RIPK4P57078 832 aa18.03■□□□□ 0.48
UBE3B-210ENST00000539599 HMOX1P09601 288 aa18.02■□□□□ 0.48
UBE3B-210ENST00000539599 SLC52A1Q9NWF4 448 aa18.02■□□□□ 0.48
UBE3B-210ENST00000539599 USP32Q8NFA0 1604 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms