RNA–Protein interactions for RNA: ENST00000539492.1

CD4-209, Transcript of CD4 molecule, humanhuman

TSL 4

Gene CD4, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-209ENST00000539492 NGLY1Q96IV0 654 aa12.22□□□□□ -0.45
CD4-209ENST00000539492 ORAI2Q96SN7 254 aa12.22□□□□□ -0.45
CD4-209ENST00000539492 CCDC144AA2RUR9 1427 aa12.2□□□□□ -0.46
CD4-209ENST00000539492 TECPR2O15040 1411 aa12.2□□□□□ -0.46
CD4-209ENST00000539492 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
CD4-209ENST00000539492 MYOM2P54296 1465 aa12.2□□□□□ -0.46
CD4-209ENST00000539492 PXDNQ92626 1479 aa12.2□□□□□ -0.46
CD4-209ENST00000539492 EP400Q96L91 3159 aa12.19□□□□□ -0.46
CD4-209ENST00000539492 FMN2Q9NZ56 1722 aa12.19□□□□□ -0.46
CD4-209ENST00000539492 ATRNO75882 1429 aa12.19□□□□□ -0.46
CD4-209ENST00000539492 SPATA31E1Q6ZUB1 1445 aa12.19□□□□□ -0.46
CD4-209ENST00000539492 ADGRF5Q8IZF2 1346 aa12.18□□□□□ -0.46
CD4-209ENST00000539492 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.18□□□□□ -0.46
CD4-209ENST00000539492 FNBP4Q8N3X1 1017 aaPredicted RBP12.18□□□□□ -0.46
CD4-209ENST00000539492 USP21Q9UK80 565 aa12.18□□□□□ -0.46
CD4-209ENST00000539492 TRPC5Q9UL62 973 aaPredicted RBP12.18□□□□□ -0.46
CD4-209ENST00000539492 KIF1AQ12756 1690 aa12.18□□□□□ -0.46
CD4-209ENST00000539492 LRPPRCP42704 1394 aaKnown RBP12.18□□□□□ -0.46
CD4-209ENST00000539492 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
CD4-209ENST00000539492 ANKRD30BQ9BXX2 1392 aa12.18□□□□□ -0.46
CD4-209ENST00000539492 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
CD4-209ENST00000539492 RGPD8O14715 1765 aaPredicted RBP12.17□□□□□ -0.46
CD4-209ENST00000539492 FOXD1Q16676 465 aa12.16□□□□□ -0.46
CD4-209ENST00000539492 PIK3C2GO75747 1445 aa12.16□□□□□ -0.46
CD4-209ENST00000539492 SRCAPQ6ZRS2 3230 aa12.16□□□□□ -0.46
CD4-209ENST00000539492 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
CD4-209ENST00000539492 RGL3Q3MIN7 710 aa12.14□□□□□ -0.47
CD4-209ENST00000539492 STK26Q9P289 416 aa12.14□□□□□ -0.47
CD4-209ENST00000539492 BCL9LQ86UU0 1499 aa12.14□□□□□ -0.47
CD4-209ENST00000539492 YTHDC2Q9H6S0 1430 aaKnown RBP12.13□□□□□ -0.47
CD4-209ENST00000539492 FOXO3O43524 673 aa12.13□□□□□ -0.47
CD4-209ENST00000539492 WAPLQ7Z5K2 1190 aa12.13□□□□□ -0.47
CD4-209ENST00000539492 MPHOSPH9Q99550 1183 aa12.13□□□□□ -0.47
CD4-209ENST00000539492 PLEKHH1Q9ULM0 1364 aa12.13□□□□□ -0.47
CD4-209ENST00000539492 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
CD4-209ENST00000539492 USP32Q8NFA0 1604 aa12.11□□□□□ -0.47
CD4-209ENST00000539492 BRWD3Q6RI45 1802 aa12.11□□□□□ -0.47
CD4-209ENST00000539492 NUTM2FA1L443 756 aa12.11□□□□□ -0.47
CD4-209ENST00000539492 TMEM132EQ6IEE7 984 aa12.11□□□□□ -0.47
CD4-209ENST00000539492 NRXN1Q9ULB1 1477 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 ABCA3Q99758 1704 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 SLIT2O94813 1529 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 SPATA31A3Q5VYP0 1347 aa12.1□□□□□ -0.47
CD4-209ENST00000539492 ACIN1Q9UKV3 1341 aaKnown RBP12.1□□□□□ -0.47
CD4-209ENST00000539492 GLI3P10071 1580 aa12.09□□□□□ -0.47
CD4-209ENST00000539492 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
CD4-209ENST00000539492 UNC5CLQ8IV45 518 aa12.08□□□□□ -0.48
CD4-209ENST00000539492 GJD4Q96KN9 370 aaPredicted RBP12.08□□□□□ -0.48
CD4-209ENST00000539492 C14orf93Q9H972 538 aaKnown RBP12.08□□□□□ -0.48
CD4-209ENST00000539492 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
CD4-209ENST00000539492 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.48
CD4-209ENST00000539492 CCDC125Q86Z20 511 aa12.07□□□□□ -0.48
CD4-209ENST00000539492 DLC1Q96QB1 1528 aa12.06□□□□□ -0.48
CD4-209ENST00000539492 DHX57Q6P158 1386 aaKnown RBP12.06□□□□□ -0.48
CD4-209ENST00000539492 KRT28Q7Z3Y7 464 aa12.06□□□□□ -0.48
CD4-209ENST00000539492 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
CD4-209ENST00000539492 ADGRB2O60241 1585 aa12.05□□□□□ -0.48
CD4-209ENST00000539492 PSME1Q06323 249 aa12.05□□□□□ -0.48
CD4-209ENST00000539492 ZRANB1Q9UGI0 708 aa12.05□□□□□ -0.48
CD4-209ENST00000539492 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
CD4-209ENST00000539492 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
CD4-209ENST00000539492 TRPM3Q9HCF6 1732 aaPredicted RBP12.04□□□□□ -0.48
CD4-209ENST00000539492 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
CD4-209ENST00000539492 ARHGEF10O15013 1369 aa12.04□□□□□ -0.48
CD4-209ENST00000539492 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
CD4-209ENST00000539492 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
CD4-209ENST00000539492 NRAPQ86VF7 1730 aa12.03□□□□□ -0.48
CD4-209ENST00000539492 BLMP54132 1417 aaPredicted RBP12.03□□□□□ -0.48
CD4-209ENST00000539492 ADGRB1O14514 1584 aa12.02□□□□□ -0.49
CD4-209ENST00000539492 ALS2Q96Q42 1657 aa12.02□□□□□ -0.49
CD4-209ENST00000539492 SAFB2Q14151 953 aaKnown RBP eCLIP12.01□□□□□ -0.49
CD4-209ENST00000539492 VPS72Q15906 364 aa12.01□□□□□ -0.49
CD4-209ENST00000539492 ITSN1Q15811 1721 aa12□□□□□ -0.49
CD4-209ENST00000539492 CABLES1Q8TDN4 633 aa12□□□□□ -0.49
CD4-209ENST00000539492 POGKQ9P215 609 aa12□□□□□ -0.49
CD4-209ENST00000539492 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
CD4-209ENST00000539492 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
CD4-209ENST00000539492 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
CD4-209ENST00000539492 SEPT12Q8IYM1 358 aa11.99□□□□□ -0.49
CD4-209ENST00000539492 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
CD4-209ENST00000539492 TULP4Q9NRJ4 1543 aa11.99□□□□□ -0.49
CD4-209ENST00000539492 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
CD4-209ENST00000539492 ARHGEF28Q8N1W1 1705 aaKnown RBP11.98□□□□□ -0.49
CD4-209ENST00000539492 PMFBP1Q8TBY8 1022 aa11.98□□□□□ -0.49
CD4-209ENST00000539492 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
CD4-209ENST00000539492 SF3B2Q13435 895 aaKnown RBP11.97□□□□□ -0.49
CD4-209ENST00000539492 CCDC9Q9Y3X0 531 aaKnown RBP11.97□□□□□ -0.49
CD4-209ENST00000539492 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.49
CD4-209ENST00000539492 FAM83GA6ND36 823 aa11.96□□□□□ -0.49
CD4-209ENST00000539492 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
CD4-209ENST00000539492 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.49
CD4-209ENST00000539492 RGPD1P0DJD0 1748 aa11.95□□□□□ -0.5
CD4-209ENST00000539492 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
CD4-209ENST00000539492 DEFB132Q7Z7B7 95 aa11.95□□□□□ -0.5
CD4-209ENST00000539492 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
CD4-209ENST00000539492 LRP5O75197 1615 aa11.94□□□□□ -0.5
CD4-209ENST00000539492 MINK1Q8N4C8 1332 aaPredicted RBP11.94□□□□□ -0.5
CD4-209ENST00000539492 PRR36Q9H6K5 1346 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms