RNA–Protein interactions for RNA: ENST00000539458.1

SLC3A2-213, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-213ENST00000539458 NBPF1Q3BBV0 1214 aa24.85■■□□□ 1.57
SLC3A2-213ENST00000539458 C19orf44Q9H6X5 657 aa24.84■■□□□ 1.57
SLC3A2-213ENST00000539458 DCCP43146 1447 aa24.84■■□□□ 1.57
SLC3A2-213ENST00000539458 ARHGEF28Q8N1W1 1705 aaKnown RBP24.83■■□□□ 1.57
SLC3A2-213ENST00000539458 TRAK1Q9UPV9 953 aa24.82■■□□□ 1.56
SLC3A2-213ENST00000539458 RALGAPBQ86X10 1494 aa24.82■■□□□ 1.56
SLC3A2-213ENST00000539458 PLEKHH1Q9ULM0 1364 aa24.81■■□□□ 1.56
SLC3A2-213ENST00000539458 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
SLC3A2-213ENST00000539458 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
SLC3A2-213ENST00000539458 PRAM1Q96QH2 718 aa24.79■■□□□ 1.56
SLC3A2-213ENST00000539458 GPRASP1Q5JY77 1395 aa24.79■■□□□ 1.56
SLC3A2-213ENST00000539458 CDC42BPGQ6DT37 1551 aa24.77■■□□□ 1.56
SLC3A2-213ENST00000539458 ATF3P18847 181 aa24.77■■□□□ 1.56
SLC3A2-213ENST00000539458 CADPS2Q86UW7 1296 aa24.77■■□□□ 1.56
SLC3A2-213ENST00000539458 POGKQ9P215 609 aa24.76■■□□□ 1.55
SLC3A2-213ENST00000539458 ADGRB2O60241 1585 aa24.73■■□□□ 1.55
SLC3A2-213ENST00000539458 SLAIN2Q9P270 581 aa24.72■■□□□ 1.55
SLC3A2-213ENST00000539458 MST1RQ04912 1400 aa24.71■■□□□ 1.55
SLC3A2-213ENST00000539458 SAFB2Q14151 953 aaKnown RBP eCLIP24.71■■□□□ 1.55
SLC3A2-213ENST00000539458 CARD11Q9BXL7 1154 aa24.69■■□□□ 1.54
SLC3A2-213ENST00000539458 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
SLC3A2-213ENST00000539458 EIF3AQ14152 1382 aaKnown RBP24.68■■□□□ 1.54
SLC3A2-213ENST00000539458 FMN2Q9NZ56 1722 aa24.68■■□□□ 1.54
SLC3A2-213ENST00000539458 CENPJQ9HC77 1338 aaPredicted RBP24.66■■□□□ 1.54
SLC3A2-213ENST00000539458 QRICH2Q9H0J4 1663 aa24.66■■□□□ 1.54
SLC3A2-213ENST00000539458 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.54
SLC3A2-213ENST00000539458 MINK1Q8N4C8 1332 aaPredicted RBP24.64■■□□□ 1.54
SLC3A2-213ENST00000539458 HIRIP3Q9BW71 556 aaPredicted RBP24.62■■□□□ 1.53
SLC3A2-213ENST00000539458 TULP4Q9NRJ4 1543 aa24.58■■□□□ 1.53
SLC3A2-213ENST00000539458 WASLO00401 505 aaPredicted RBP24.58■■□□□ 1.53
SLC3A2-213ENST00000539458 BRINP3Q76B58 766 aa24.58■■□□□ 1.53
SLC3A2-213ENST00000539458 ANKARQ7Z5J8 1434 aa24.58■■□□□ 1.53
SLC3A2-213ENST00000539458 USP32Q8NFA0 1604 aa24.57■■□□□ 1.52
SLC3A2-213ENST00000539458 RGS17Q9UGC6 210 aaPredicted RBP24.56■■□□□ 1.52
SLC3A2-213ENST00000539458 SBNO2Q9Y2G9 1366 aa24.55■■□□□ 1.52
SLC3A2-213ENST00000539458 AHDC1Q5TGY3 1603 aaPredicted RBP24.55■■□□□ 1.52
SLC3A2-213ENST00000539458 NUTM2FA1L443 756 aa24.55■■□□□ 1.52
SLC3A2-213ENST00000539458 USP47Q96K76 1375 aa24.54■■□□□ 1.52
SLC3A2-213ENST00000539458 NHSL1Q5SYE7 1610 aa24.53■■□□□ 1.52
SLC3A2-213ENST00000539458 ORAI2Q96SN7 254 aa24.53■■□□□ 1.52
SLC3A2-213ENST00000539458 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
SLC3A2-213ENST00000539458 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
SLC3A2-213ENST00000539458 RGPD8O14715 1765 aaPredicted RBP24.52■■□□□ 1.52
SLC3A2-213ENST00000539458 ESCO1Q5FWF5 840 aa24.51■■□□□ 1.51
SLC3A2-213ENST00000539458 CDK19Q9BWU1 502 aa24.51■■□□□ 1.51
SLC3A2-213ENST00000539458 ATP7BP35670 1465 aa24.51■■□□□ 1.51
SLC3A2-213ENST00000539458 ITSN1Q15811 1721 aa24.49■■□□□ 1.51
SLC3A2-213ENST00000539458 EVC2Q86UK5 1308 aa24.49■■□□□ 1.51
SLC3A2-213ENST00000539458 PRR36Q9H6K5 1346 aa24.49■■□□□ 1.51
SLC3A2-213ENST00000539458 ST20-MTHFSA0A0A6YYL1 179 aa24.48■■□□□ 1.51
SLC3A2-213ENST00000539458 COL16A1Q07092 1604 aaPredicted RBP24.48■■□□□ 1.51
SLC3A2-213ENST00000539458 TOPAZ1Q8N9V7 1692 aa24.48■■□□□ 1.51
SLC3A2-213ENST00000539458 POTEAQ6S8J7 498 aa24.47■■□□□ 1.51
SLC3A2-213ENST00000539458 JCADQ9P266 1359 aa24.46■■□□□ 1.51
SLC3A2-213ENST00000539458 SRPK2P78362 688 aaKnown RBP24.45■■□□□ 1.5
SLC3A2-213ENST00000539458 NUDT16Q96DE0 195 aaKnown RBP24.45■■□□□ 1.5
SLC3A2-213ENST00000539458 PHF8Q9UPP1 1060 aa24.45■■□□□ 1.5
SLC3A2-213ENST00000539458 TESK2Q96S53 571 aa24.44■■□□□ 1.5
SLC3A2-213ENST00000539458 NPHP3Q7Z494 1330 aa24.42■■□□□ 1.5
SLC3A2-213ENST00000539458 SLC24A1O60721 1099 aa24.42■■□□□ 1.5
SLC3A2-213ENST00000539458 DDX17Q92841 729 aaKnown RBP24.42■■□□□ 1.5
SLC3A2-213ENST00000539458 CABP2Q9NPB3 220 aa24.42■■□□□ 1.5
SLC3A2-213ENST00000539458 PXDNQ92626 1479 aa24.4■■□□□ 1.5
SLC3A2-213ENST00000539458 FOXO3O43524 673 aa24.4■■□□□ 1.5
SLC3A2-213ENST00000539458 MEX3CQ5U5Q3 659 aaKnown RBP24.4■■□□□ 1.5
SLC3A2-213ENST00000539458 CCDC61Q9Y6R9 512 aa24.4■■□□□ 1.5
SLC3A2-213ENST00000539458 SOS2Q07890 1332 aaPredicted RBP24.39■■□□□ 1.5
SLC3A2-213ENST00000539458 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.49
SLC3A2-213ENST00000539458 PMFBP1Q8TBY8 1022 aa24.38■■□□□ 1.49
SLC3A2-213ENST00000539458 ATAD2Q6PL18 1390 aa24.38■■□□□ 1.49
SLC3A2-213ENST00000539458 PPIP5K1Q6PFW1 1433 aa24.37■■□□□ 1.49
SLC3A2-213ENST00000539458 SPATA31A6Q5VVP1 1343 aa24.35■■□□□ 1.49
SLC3A2-213ENST00000539458 SHPRHQ149N8 1683 aa24.35■■□□□ 1.49
SLC3A2-213ENST00000539458 PLEKHG3A1L390 1219 aa24.35■■□□□ 1.49
SLC3A2-213ENST00000539458 LRRC59Q96AG4 307 aaKnown RBP24.35■■□□□ 1.49
SLC3A2-213ENST00000539458 PUS7Q96PZ0 661 aaKnown RBP24.35■■□□□ 1.49
SLC3A2-213ENST00000539458 POLR3AO14802 1390 aaPredicted RBP24.34■■□□□ 1.49
SLC3A2-213ENST00000539458 HSPA5P11021 654 aaKnown RBP24.34■■□□□ 1.49
SLC3A2-213ENST00000539458 TMF1P82094 1093 aa24.34■■□□□ 1.49
SLC3A2-213ENST00000539458 NGDNQ8NEJ9 315 aaKnown RBP24.33■■□□□ 1.49
SLC3A2-213ENST00000539458 XPCQ01831 940 aaPredicted RBP24.32■■□□□ 1.48
SLC3A2-213ENST00000539458 ZNF772Q68DY9 489 aaPredicted RBP24.32■■□□□ 1.48
SLC3A2-213ENST00000539458 KRT28Q7Z3Y7 464 aa24.32■■□□□ 1.48
SLC3A2-213ENST00000539458 PSME1Q06323 249 aa24.31■■□□□ 1.48
SLC3A2-213ENST00000539458 TRPM3Q9HCF6 1732 aaPredicted RBP24.3■■□□□ 1.48
SLC3A2-213ENST00000539458 CABP1Q9NZU7 370 aa24.3■■□□□ 1.48
SLC3A2-213ENST00000539458 ACEP12821 1306 aa24.3■■□□□ 1.48
SLC3A2-213ENST00000539458 SBNO1A3KN83 1393 aa24.29■■□□□ 1.48
SLC3A2-213ENST00000539458 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
SLC3A2-213ENST00000539458 CDCA8Q53HL2 280 aa24.28■■□□□ 1.48
SLC3A2-213ENST00000539458 TNS3Q68CZ2 1445 aa24.27■■□□□ 1.48
SLC3A2-213ENST00000539458 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
SLC3A2-213ENST00000539458 SPATA31A3Q5VYP0 1347 aa24.26■■□□□ 1.47
SLC3A2-213ENST00000539458 AKAP12Q02952 1782 aa24.25■■□□□ 1.47
SLC3A2-213ENST00000539458 NINLQ9Y2I6 1382 aa24.25■■□□□ 1.47
SLC3A2-213ENST00000539458 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
SLC3A2-213ENST00000539458 ALS2Q96Q42 1657 aa24.24■■□□□ 1.47
SLC3A2-213ENST00000539458 CPSF1Q10570 1443 aaKnown RBP24.23■■□□□ 1.47
SLC3A2-213ENST00000539458 USP6P35125 1406 aa24.22■■□□□ 1.47
SLC3A2-213ENST00000539458 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms