RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CFAP70Q5T0N1 1121 aa28.02■■■□□ 2.08
TNFRSF1A-212ENST00000539372 YTHDC2Q9H6S0 1430 aaKnown RBP28.01■■■□□ 2.08
TNFRSF1A-212ENST00000539372 PLEKHH1Q9ULM0 1364 aa28.01■■■□□ 2.07
TNFRSF1A-212ENST00000539372 NUTM2BA6NNL0 878 aaPredicted RBP28.01■■■□□ 2.07
TNFRSF1A-212ENST00000539372 NUTM2EB1AL46 878 aaPredicted RBP28.01■■■□□ 2.07
TNFRSF1A-212ENST00000539372 NUTM2AQ8IVF1 878 aaPredicted RBP28.01■■■□□ 2.07
TNFRSF1A-212ENST00000539372 LRRC59Q96AG4 307 aaKnown RBP28■■■□□ 2.07
TNFRSF1A-212ENST00000539372 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
TNFRSF1A-212ENST00000539372 CDC42BPGQ6DT37 1551 aa27.98■■■□□ 2.07
TNFRSF1A-212ENST00000539372 KDM2AQ9Y2K7 1162 aa27.95■■■□□ 2.06
TNFRSF1A-212ENST00000539372 NUTM2FA1L443 756 aa27.94■■■□□ 2.06
TNFRSF1A-212ENST00000539372 ESCO1Q5FWF5 840 aa27.94■■■□□ 2.06
TNFRSF1A-212ENST00000539372 DHX57Q6P158 1386 aaKnown RBP27.94■■■□□ 2.06
TNFRSF1A-212ENST00000539372 LAMC1P11047 1609 aa27.93■■■□□ 2.06
TNFRSF1A-212ENST00000539372 DCAF11Q8TEB1 546 aa27.93■■■□□ 2.06
TNFRSF1A-212ENST00000539372 PNPLA6Q8IY17 1366 aa27.93■■■□□ 2.06
TNFRSF1A-212ENST00000539372 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
TNFRSF1A-212ENST00000539372 SIRT1Q96EB6 747 aa27.9■■■□□ 2.06
TNFRSF1A-212ENST00000539372 SAFB2Q14151 953 aaKnown RBP eCLIP27.88■■■□□ 2.05
TNFRSF1A-212ENST00000539372 ZNF772Q68DY9 489 aaPredicted RBP27.87■■■□□ 2.05
TNFRSF1A-212ENST00000539372 PRAM1Q96QH2 718 aa27.87■■■□□ 2.05
TNFRSF1A-212ENST00000539372 FOXO3O43524 673 aa27.85■■■□□ 2.05
TNFRSF1A-212ENST00000539372 XPCQ01831 940 aaPredicted RBP27.85■■■□□ 2.05
TNFRSF1A-212ENST00000539372 NPHP3Q7Z494 1330 aa27.85■■■□□ 2.05
TNFRSF1A-212ENST00000539372 ADGRB1O14514 1584 aa27.83■■■□□ 2.05
TNFRSF1A-212ENST00000539372 FMN2Q9NZ56 1722 aa27.83■■■□□ 2.05
TNFRSF1A-212ENST00000539372 C8orf37Q96NL8 207 aa27.82■■■□□ 2.04
TNFRSF1A-212ENST00000539372 POGKQ9P215 609 aa27.82■■■□□ 2.04
TNFRSF1A-212ENST00000539372 AFF2P51816 1311 aa27.82■■■□□ 2.04
TNFRSF1A-212ENST00000539372 ADAMTS2O95450 1211 aa27.81■■■□□ 2.04
TNFRSF1A-212ENST00000539372 TRAK1Q9UPV9 953 aa27.81■■■□□ 2.04
TNFRSF1A-212ENST00000539372 PXDNQ92626 1479 aa27.8■■■□□ 2.04
TNFRSF1A-212ENST00000539372 DLC1Q96QB1 1528 aa27.8■■■□□ 2.04
TNFRSF1A-212ENST00000539372 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
TNFRSF1A-212ENST00000539372 HIRIP3Q9BW71 556 aaPredicted RBP27.74■■■□□ 2.03
TNFRSF1A-212ENST00000539372 RXRBP28702 533 aa27.73■■■□□ 2.03
TNFRSF1A-212ENST00000539372 NGLY1Q96IV0 654 aa27.73■■■□□ 2.03
TNFRSF1A-212ENST00000539372 KIF1AQ12756 1690 aa27.72■■■□□ 2.03
TNFRSF1A-212ENST00000539372 COL22A1Q8NFW1 1626 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF1A-212ENST00000539372 PHF8Q9UPP1 1060 aa27.72■■■□□ 2.03
TNFRSF1A-212ENST00000539372 MINK1Q8N4C8 1332 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF1A-212ENST00000539372 RGPD8O14715 1765 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF1A-212ENST00000539372 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
TNFRSF1A-212ENST00000539372 QTRT2Q9H974 415 aaKnown RBP27.68■■■□□ 2.02
TNFRSF1A-212ENST00000539372 ADGRB2O60241 1585 aa27.68■■■□□ 2.02
TNFRSF1A-212ENST00000539372 SPATA31A3Q5VYP0 1347 aa27.66■■■□□ 2.02
TNFRSF1A-212ENST00000539372 PMFBP1Q8TBY8 1022 aa27.65■■■□□ 2.02
TNFRSF1A-212ENST00000539372 USP32Q8NFA0 1604 aa27.65■■■□□ 2.02
TNFRSF1A-212ENST00000539372 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
TNFRSF1A-212ENST00000539372 USP21Q9UK80 565 aa27.63■■■□□ 2.01
TNFRSF1A-212ENST00000539372 PSME1Q06323 249 aa27.62■■■□□ 2.01
TNFRSF1A-212ENST00000539372 ARHGEF28Q8N1W1 1705 aaKnown RBP27.61■■■□□ 2.01
TNFRSF1A-212ENST00000539372 WASLO00401 505 aaPredicted RBP27.61■■■□□ 2.01
TNFRSF1A-212ENST00000539372 PRR36Q9H6K5 1346 aa27.61■■■□□ 2.01
TNFRSF1A-212ENST00000539372 RBM6P78332 1123 aaKnown RBP27.6■■■□□ 2.01
TNFRSF1A-212ENST00000539372 TNS3Q68CZ2 1445 aa27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 CDK12Q9NYV4 1490 aaPredicted RBP27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 PLEKHG5O94827 1062 aa27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 NBPF1Q3BBV0 1214 aa27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 FNBP4Q8N3X1 1017 aaPredicted RBP27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 EIF3AQ14152 1382 aaKnown RBP27.59■■■□□ 2.01
TNFRSF1A-212ENST00000539372 LMOD2Q6P5Q4 547 aa27.58■■■□□ 2.01
TNFRSF1A-212ENST00000539372 SIN3AQ96ST3 1273 aa27.58■■■□□ 2.01
TNFRSF1A-212ENST00000539372 TULP4Q9NRJ4 1543 aa27.57■■■□□ 2
TNFRSF1A-212ENST00000539372 KIAA1210Q9ULL0 1709 aa27.57■■■□□ 2
TNFRSF1A-212ENST00000539372 SBNO1A3KN83 1393 aa27.56■■■□□ 2
TNFRSF1A-212ENST00000539372 RGS12O14924 1447 aa27.56■■■□□ 2
TNFRSF1A-212ENST00000539372 CABLES1Q8TDN4 633 aa27.55■■■□□ 2
TNFRSF1A-212ENST00000539372 L3MBTL2Q969R5 705 aa27.55■■■□□ 2
TNFRSF1A-212ENST00000539372 TRPC5Q9UL62 973 aaPredicted RBP27.55■■■□□ 2
TNFRSF1A-212ENST00000539372 NEUROD1Q13562 356 aa27.54■■■□□ 2
TNFRSF1A-212ENST00000539372 MARF1Q9Y4F3 1742 aaKnown RBP27.54■■■□□ 2
TNFRSF1A-212ENST00000539372 HAP1P54257 671 aaPredicted RBP27.53■■■□□ 2
TNFRSF1A-212ENST00000539372 BCL9LQ86UU0 1499 aa27.51■■■□□ 2
TNFRSF1A-212ENST00000539372 ATRNO75882 1429 aa27.51■■□□□ 1.99
TNFRSF1A-212ENST00000539372 ARHGEF10O15013 1369 aa27.5■■□□□ 1.99
TNFRSF1A-212ENST00000539372 NGDNQ8NEJ9 315 aaKnown RBP27.5■■□□□ 1.99
TNFRSF1A-212ENST00000539372 UPF1Q92900 1129 aaKnown RBP eCLIP27.5■■□□□ 1.99
TNFRSF1A-212ENST00000539372 CDK19Q9BWU1 502 aa27.5■■□□□ 1.99
TNFRSF1A-212ENST00000539372 GPRASP1Q5JY77 1395 aa27.49■■□□□ 1.99
TNFRSF1A-212ENST00000539372 NUDT16Q96DE0 195 aaKnown RBP27.49■■□□□ 1.99
TNFRSF1A-212ENST00000539372 ATP7BP35670 1465 aa27.48■■□□□ 1.99
TNFRSF1A-212ENST00000539372 TRPM3Q9HCF6 1732 aaPredicted RBP27.47■■□□□ 1.99
TNFRSF1A-212ENST00000539372 SLIT2O94813 1529 aa27.44■■□□□ 1.98
TNFRSF1A-212ENST00000539372 PAK3O75914 559 aaPredicted RBP27.43■■□□□ 1.98
TNFRSF1A-212ENST00000539372 UNC5CLQ8IV45 518 aa27.43■■□□□ 1.98
TNFRSF1A-212ENST00000539372 ABCA3Q99758 1704 aa27.43■■□□□ 1.98
TNFRSF1A-212ENST00000539372 CENPJQ9HC77 1338 aaPredicted RBP27.42■■□□□ 1.98
TNFRSF1A-212ENST00000539372 ITSN1Q15811 1721 aa27.42■■□□□ 1.98
TNFRSF1A-212ENST00000539372 GJD4Q96KN9 370 aaPredicted RBP27.41■■□□□ 1.98
TNFRSF1A-212ENST00000539372 ALS2Q96Q42 1657 aa27.4■■□□□ 1.98
TNFRSF1A-212ENST00000539372 CCDC61Q9Y6R9 512 aa27.38■■□□□ 1.97
TNFRSF1A-212ENST00000539372 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.38■■□□□ 1.97
TNFRSF1A-212ENST00000539372 SRPK2P78362 688 aaKnown RBP27.37■■□□□ 1.97
TNFRSF1A-212ENST00000539372 TRPM1Q7Z4N2 1603 aa27.37■■□□□ 1.97
TNFRSF1A-212ENST00000539372 FAM83GA6ND36 823 aa27.36■■□□□ 1.97
TNFRSF1A-212ENST00000539372 TOPAZ1Q8N9V7 1692 aa27.36■■□□□ 1.97
TNFRSF1A-212ENST00000539372 ACEP12821 1306 aa27.36■■□□□ 1.97
TNFRSF1A-212ENST00000539372 CABP2Q9NPB3 220 aa27.35■■□□□ 1.97
TNFRSF1A-212ENST00000539372 RALGAPBQ86X10 1494 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms