RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 LRRC59Q96AG4 307 aaKnown RBP32.71■■■□□ 2.83
SCARB1-206ENST00000539320 HRCP23327 699 aa32.7■■■□□ 2.83
SCARB1-206ENST00000539320 ORAI2Q96SN7 254 aa32.68■■■□□ 2.82
SCARB1-206ENST00000539320 C14orf93Q9H972 538 aaKnown RBP32.68■■■□□ 2.82
SCARB1-206ENST00000539320 PNPLA6Q8IY17 1366 aa32.68■■■□□ 2.82
SCARB1-206ENST00000539320 WAPLQ7Z5K2 1190 aa32.67■■■□□ 2.82
SCARB1-206ENST00000539320 PLEKHH1Q9ULM0 1364 aa32.67■■■□□ 2.82
SCARB1-206ENST00000539320 NUTM2BA6NNL0 878 aaPredicted RBP32.66■■■□□ 2.82
SCARB1-206ENST00000539320 NUTM2EB1AL46 878 aaPredicted RBP32.66■■■□□ 2.82
SCARB1-206ENST00000539320 NUTM2AQ8IVF1 878 aaPredicted RBP32.66■■■□□ 2.82
SCARB1-206ENST00000539320 CFAP70Q5T0N1 1121 aa32.63■■■□□ 2.81
SCARB1-206ENST00000539320 SOS2Q07890 1332 aaPredicted RBP32.62■■■□□ 2.81
SCARB1-206ENST00000539320 DHX57Q6P158 1386 aaKnown RBP32.61■■■□□ 2.81
SCARB1-206ENST00000539320 ZNF772Q68DY9 489 aaPredicted RBP32.61■■■□□ 2.81
SCARB1-206ENST00000539320 FMN2Q9NZ56 1722 aa32.58■■■□□ 2.81
SCARB1-206ENST00000539320 SIRT1Q96EB6 747 aa32.58■■■□□ 2.81
SCARB1-206ENST00000539320 ESCO1Q5FWF5 840 aa32.57■■■□□ 2.8
SCARB1-206ENST00000539320 NPHP3Q7Z494 1330 aa32.55■■■□□ 2.8
SCARB1-206ENST00000539320 DLC1Q96QB1 1528 aa32.55■■■□□ 2.8
SCARB1-206ENST00000539320 ADGRB1O14514 1584 aa32.54■■■□□ 2.8
SCARB1-206ENST00000539320 NUTM2FA1L443 756 aa32.52■■■□□ 2.8
SCARB1-206ENST00000539320 PXDNQ92626 1479 aa32.52■■■□□ 2.8
SCARB1-206ENST00000539320 AFF2P51816 1311 aa32.51■■■□□ 2.8
SCARB1-206ENST00000539320 KIF1AQ12756 1690 aa32.5■■■□□ 2.79
SCARB1-206ENST00000539320 COL22A1Q8NFW1 1626 aaPredicted RBP32.49■■■□□ 2.79
SCARB1-206ENST00000539320 DCAF11Q8TEB1 546 aa32.49■■■□□ 2.79
SCARB1-206ENST00000539320 PRAM1Q96QH2 718 aa32.48■■■□□ 2.79
SCARB1-206ENST00000539320 STAC3Q96MF2 364 aa32.47■■■□□ 2.79
SCARB1-206ENST00000539320 C8orf37Q96NL8 207 aa32.47■■■□□ 2.79
SCARB1-206ENST00000539320 KDM2AQ9Y2K7 1162 aa32.47■■■□□ 2.79
SCARB1-206ENST00000539320 FOXO3O43524 673 aa32.46■■■□□ 2.79
SCARB1-206ENST00000539320 SAFB2Q14151 953 aaKnown RBP eCLIP32.44■■■□□ 2.78
SCARB1-206ENST00000539320 ADGRB2O60241 1585 aa32.44■■■□□ 2.78
SCARB1-206ENST00000539320 ADAMTS2O95450 1211 aa32.43■■■□□ 2.78
SCARB1-206ENST00000539320 XPCQ01831 940 aaPredicted RBP32.43■■■□□ 2.78
SCARB1-206ENST00000539320 POGKQ9P215 609 aa32.42■■■□□ 2.78
SCARB1-206ENST00000539320 RXRBP28702 533 aa32.4■■■□□ 2.78
SCARB1-206ENST00000539320 TRAK1Q9UPV9 953 aa32.39■■■□□ 2.78
SCARB1-206ENST00000539320 CDK12Q9NYV4 1490 aaPredicted RBP32.38■■■□□ 2.77
SCARB1-206ENST00000539320 RGPD8O14715 1765 aaPredicted RBP32.37■■■□□ 2.77
SCARB1-206ENST00000539320 ANKARQ7Z5J8 1434 aa32.36■■■□□ 2.77
SCARB1-206ENST00000539320 NGLY1Q96IV0 654 aa32.36■■■□□ 2.77
SCARB1-206ENST00000539320 PHF8Q9UPP1 1060 aa32.35■■■□□ 2.77
SCARB1-206ENST00000539320 USP32Q8NFA0 1604 aa32.33■■■□□ 2.77
SCARB1-206ENST00000539320 SPATA31A3Q5VYP0 1347 aa32.31■■■□□ 2.76
SCARB1-206ENST00000539320 ARHGEF28Q8N1W1 1705 aaKnown RBP32.3■■■□□ 2.76
SCARB1-206ENST00000539320 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
SCARB1-206ENST00000539320 KRT28Q7Z3Y7 464 aa32.29■■■□□ 2.76
SCARB1-206ENST00000539320 QTRT2Q9H974 415 aaKnown RBP32.29■■■□□ 2.76
SCARB1-206ENST00000539320 MINK1Q8N4C8 1332 aaPredicted RBP32.28■■■□□ 2.76
SCARB1-206ENST00000539320 TNS3Q68CZ2 1445 aa32.28■■■□□ 2.76
SCARB1-206ENST00000539320 RBM6P78332 1123 aaKnown RBP32.28■■■□□ 2.76
SCARB1-206ENST00000539320 HIRIP3Q9BW71 556 aaPredicted RBP32.28■■■□□ 2.76
SCARB1-206ENST00000539320 MARF1Q9Y4F3 1742 aaKnown RBP32.28■■■□□ 2.76
SCARB1-206ENST00000539320 RGS12O14924 1447 aa32.27■■■□□ 2.76
SCARB1-206ENST00000539320 TULP4Q9NRJ4 1543 aa32.27■■■□□ 2.76
SCARB1-206ENST00000539320 KIAA1210Q9ULL0 1709 aa32.27■■■□□ 2.76
SCARB1-206ENST00000539320 FNBP4Q8N3X1 1017 aaPredicted RBP32.26■■■□□ 2.75
SCARB1-206ENST00000539320 USP21Q9UK80 565 aa32.26■■■□□ 2.75
SCARB1-206ENST00000539320 PSME1Q06323 249 aa32.24■■■□□ 2.75
SCARB1-206ENST00000539320 SBNO1A3KN83 1393 aa32.23■■■□□ 2.75
SCARB1-206ENST00000539320 ATRNO75882 1429 aa32.21■■■□□ 2.75
SCARB1-206ENST00000539320 TRPC5Q9UL62 973 aaPredicted RBP32.21■■■□□ 2.75
SCARB1-206ENST00000539320 WASLO00401 505 aaPredicted RBP32.2■■■□□ 2.75
SCARB1-206ENST00000539320 PMFBP1Q8TBY8 1022 aa32.2■■■□□ 2.75
SCARB1-206ENST00000539320 PRR36Q9H6K5 1346 aa32.2■■■□□ 2.74
SCARB1-206ENST00000539320 ARHGEF10O15013 1369 aa32.18■■■□□ 2.74
SCARB1-206ENST00000539320 BCL9LQ86UU0 1499 aa32.16■■■□□ 2.74
SCARB1-206ENST00000539320 UPF1Q92900 1129 aaKnown RBP eCLIP32.15■■■□□ 2.74
SCARB1-206ENST00000539320 ABCA3Q99758 1704 aa32.14■■■□□ 2.74
SCARB1-206ENST00000539320 TRPM3Q9HCF6 1732 aaPredicted RBP32.14■■■□□ 2.74
SCARB1-206ENST00000539320 ATP7BP35670 1465 aa32.14■■■□□ 2.74
SCARB1-206ENST00000539320 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.13■■■□□ 2.73
SCARB1-206ENST00000539320 ITSN1Q15811 1721 aa32.12■■■□□ 2.73
SCARB1-206ENST00000539320 GPRASP1Q5JY77 1395 aa32.12■■■□□ 2.73
SCARB1-206ENST00000539320 LMOD2Q6P5Q4 547 aa32.12■■■□□ 2.73
SCARB1-206ENST00000539320 SLIT2O94813 1529 aa32.11■■■□□ 2.73
SCARB1-206ENST00000539320 HAP1P54257 671 aaPredicted RBP32.11■■■□□ 2.73
SCARB1-206ENST00000539320 NBPF1Q3BBV0 1214 aa32.09■■■□□ 2.73
SCARB1-206ENST00000539320 CABLES1Q8TDN4 633 aa32.08■■■□□ 2.73
SCARB1-206ENST00000539320 ALS2Q96Q42 1657 aa32.08■■■□□ 2.73
SCARB1-206ENST00000539320 PLEKHG5O94827 1062 aa32.06■■■□□ 2.72
SCARB1-206ENST00000539320 NGDNQ8NEJ9 315 aaKnown RBP32.06■■■□□ 2.72
SCARB1-206ENST00000539320 UNC5CLQ8IV45 518 aa32.04■■■□□ 2.72
SCARB1-206ENST00000539320 L3MBTL2Q969R5 705 aa32.04■■■□□ 2.72
SCARB1-206ENST00000539320 NUDT16Q96DE0 195 aaKnown RBP32.04■■■□□ 2.72
SCARB1-206ENST00000539320 TOPAZ1Q8N9V7 1692 aa32.04■■■□□ 2.72
SCARB1-206ENST00000539320 PLCH1Q4KWH8 1693 aa32.02■■■□□ 2.72
SCARB1-206ENST00000539320 SIN3AQ96ST3 1273 aa32.02■■■□□ 2.72
SCARB1-206ENST00000539320 CDK19Q9BWU1 502 aa32.02■■■□□ 2.72
SCARB1-206ENST00000539320 GJD4Q96KN9 370 aaPredicted RBP32.01■■■□□ 2.71
SCARB1-206ENST00000539320 ATAD2Q6PL18 1390 aa32.01■■■□□ 2.71
SCARB1-206ENST00000539320 NWD2Q9ULI1 1742 aa32■■■□□ 2.71
SCARB1-206ENST00000539320 CENPJQ9HC77 1338 aaPredicted RBP32■■■□□ 2.71
SCARB1-206ENST00000539320 GLI3P10071 1580 aa31.99■■■□□ 2.71
SCARB1-206ENST00000539320 RALGAPBQ86X10 1494 aa31.99■■■□□ 2.71
SCARB1-206ENST00000539320 TRPM1Q7Z4N2 1603 aa31.97■■■□□ 2.71
SCARB1-206ENST00000539320 QRICH2Q9H0J4 1663 aa31.95■■■□□ 2.71
SCARB1-206ENST00000539320 CRYBG1Q9Y4K1 1723 aa31.95■■■□□ 2.71
SCARB1-206ENST00000539320 NEUROD1Q13562 356 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms