RNA–Protein interactions for RNA: ENST00000539315.1

LINC00943-205, long intergenic non-protein coding RNA 943, humanhuman

TSL 3

Gene LINC00943, Length 856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-205ENST00000539315 ACIN1Q9UKV3 1341 aaKnown RBP27.97■■■□□ 2.07
LINC00943-205ENST00000539315 FOXD1Q16676 465 aa27.97■■■□□ 2.07
LINC00943-205ENST00000539315 ADGRF5Q8IZF2 1346 aa27.93■■■□□ 2.06
LINC00943-205ENST00000539315 FNBP4Q8N3X1 1017 aaPredicted RBP27.91■■■□□ 2.06
LINC00943-205ENST00000539315 USP21Q9UK80 565 aa27.91■■■□□ 2.06
LINC00943-205ENST00000539315 RAB3GAP2Q9H2M9 1393 aa27.9■■■□□ 2.06
LINC00943-205ENST00000539315 ESCO1Q5FWF5 840 aa27.89■■■□□ 2.06
LINC00943-205ENST00000539315 COL22A1Q8NFW1 1626 aaPredicted RBP27.88■■■□□ 2.05
LINC00943-205ENST00000539315 CDC42BPGQ6DT37 1551 aa27.87■■■□□ 2.05
LINC00943-205ENST00000539315 WAPLQ7Z5K2 1190 aa27.87■■■□□ 2.05
LINC00943-205ENST00000539315 TRPC5Q9UL62 973 aaPredicted RBP27.87■■■□□ 2.05
LINC00943-205ENST00000539315 MYOM2P54296 1465 aa27.86■■■□□ 2.05
LINC00943-205ENST00000539315 SPATA31E1Q6ZUB1 1445 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 SRCAPQ6ZRS2 3230 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 PXDNQ92626 1479 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 FOXO3O43524 673 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 RGL3Q3MIN7 710 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 STK26Q9P289 416 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 NPHP3Q7Z494 1330 aa27.85■■■□□ 2.05
LINC00943-205ENST00000539315 ATRNO75882 1429 aa27.84■■■□□ 2.05
LINC00943-205ENST00000539315 XPCQ01831 940 aaPredicted RBP27.83■■■□□ 2.05
LINC00943-205ENST00000539315 TECPR2O15040 1411 aa27.83■■■□□ 2.05
LINC00943-205ENST00000539315 TMEM132EQ6IEE7 984 aa27.82■■■□□ 2.04
LINC00943-205ENST00000539315 LRPPRCP42704 1394 aaKnown RBP27.82■■■□□ 2.04
LINC00943-205ENST00000539315 CCDC144AA2RUR9 1427 aa27.82■■■□□ 2.04
LINC00943-205ENST00000539315 NUTM2FA1L443 756 aa27.81■■■□□ 2.04
LINC00943-205ENST00000539315 PLEKHH1Q9ULM0 1364 aa27.81■■■□□ 2.04
LINC00943-205ENST00000539315 MPHOSPH9Q99550 1183 aa27.8■■■□□ 2.04
LINC00943-205ENST00000539315 ABCC11Q96J66 1382 aa27.8■■■□□ 2.04
LINC00943-205ENST00000539315 IFT172Q9UG01 1749 aa27.79■■■□□ 2.04
LINC00943-205ENST00000539315 BCL9LQ86UU0 1499 aa27.79■■■□□ 2.04
LINC00943-205ENST00000539315 ATAD2Q6PL18 1390 aa27.79■■■□□ 2.04
LINC00943-205ENST00000539315 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
LINC00943-205ENST00000539315 EP400Q96L91 3159 aa27.79■■■□□ 2.04
LINC00943-205ENST00000539315 MARF1Q9Y4F3 1742 aaKnown RBP27.75■■■□□ 2.03
LINC00943-205ENST00000539315 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
LINC00943-205ENST00000539315 KNDC1Q76NI1 1749 aa27.73■■■□□ 2.03
LINC00943-205ENST00000539315 YTHDC2Q9H6S0 1430 aaKnown RBP27.71■■■□□ 2.03
LINC00943-205ENST00000539315 FMN2Q9NZ56 1722 aa27.7■■■□□ 2.03
LINC00943-205ENST00000539315 GJD4Q96KN9 370 aaPredicted RBP27.7■■■□□ 2.02
LINC00943-205ENST00000539315 SPATA31A3Q5VYP0 1347 aa27.69■■■□□ 2.02
LINC00943-205ENST00000539315 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
LINC00943-205ENST00000539315 C14orf93Q9H972 538 aaKnown RBP27.68■■■□□ 2.02
LINC00943-205ENST00000539315 KRT28Q7Z3Y7 464 aa27.66■■■□□ 2.02
LINC00943-205ENST00000539315 RGPD8O14715 1765 aaPredicted RBP27.64■■■□□ 2.02
LINC00943-205ENST00000539315 SLIT2O94813 1529 aa27.64■■■□□ 2.02
LINC00943-205ENST00000539315 UNC5CLQ8IV45 518 aa27.64■■■□□ 2.02
LINC00943-205ENST00000539315 CFAP70Q5T0N1 1121 aa27.63■■■□□ 2.01
LINC00943-205ENST00000539315 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.63■■■□□ 2.01
LINC00943-205ENST00000539315 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
LINC00943-205ENST00000539315 NRXN1Q9ULB1 1477 aa27.62■■■□□ 2.01
LINC00943-205ENST00000539315 CCER1Q8TC90 406 aaPredicted RBP27.61■■■□□ 2.01
LINC00943-205ENST00000539315 GLI3P10071 1580 aa27.6■■■□□ 2.01
LINC00943-205ENST00000539315 RALGAPBQ86X10 1494 aa27.6■■■□□ 2.01
LINC00943-205ENST00000539315 PHF8Q9UPP1 1060 aa27.6■■■□□ 2.01
LINC00943-205ENST00000539315 CCDC125Q86Z20 511 aa27.59■■■□□ 2.01
LINC00943-205ENST00000539315 DHX57Q6P158 1386 aaKnown RBP27.58■■■□□ 2.01
LINC00943-205ENST00000539315 USP32Q8NFA0 1604 aa27.57■■■□□ 2
LINC00943-205ENST00000539315 CABLES1Q8TDN4 633 aa27.57■■■□□ 2
LINC00943-205ENST00000539315 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
LINC00943-205ENST00000539315 ZRANB1Q9UGI0 708 aa27.56■■■□□ 2
LINC00943-205ENST00000539315 TNS3Q68CZ2 1445 aa27.56■■■□□ 2
LINC00943-205ENST00000539315 PRAM1Q96QH2 718 aa27.55■■■□□ 2
LINC00943-205ENST00000539315 PSME1Q06323 249 aa27.54■■■□□ 2
LINC00943-205ENST00000539315 BRWD3Q6RI45 1802 aa27.53■■■□□ 2
LINC00943-205ENST00000539315 SBNO1A3KN83 1393 aa27.52■■■□□ 2
LINC00943-205ENST00000539315 PLEKHG5O94827 1062 aa27.51■■□□□ 1.99
LINC00943-205ENST00000539315 VPS72Q15906 364 aa27.5■■□□□ 1.99
LINC00943-205ENST00000539315 SEPT12Q8IYM1 358 aa27.49■■□□□ 1.99
LINC00943-205ENST00000539315 HAP1P54257 671 aaPredicted RBP27.48■■□□□ 1.99
LINC00943-205ENST00000539315 PMFBP1Q8TBY8 1022 aa27.48■■□□□ 1.99
LINC00943-205ENST00000539315 DLC1Q96QB1 1528 aa27.47■■□□□ 1.99
LINC00943-205ENST00000539315 ONECUT3O60422 494 aaPredicted RBP27.47■■□□□ 1.99
LINC00943-205ENST00000539315 CLSPNQ9HAW4 1339 aa27.46■■□□□ 1.99
LINC00943-205ENST00000539315 FAM83GA6ND36 823 aa27.46■■□□□ 1.99
LINC00943-205ENST00000539315 LMOD2Q6P5Q4 547 aa27.46■■□□□ 1.99
LINC00943-205ENST00000539315 POGKQ9P215 609 aa27.46■■□□□ 1.99
LINC00943-205ENST00000539315 BLMP54132 1417 aaPredicted RBP27.46■■□□□ 1.99
LINC00943-205ENST00000539315 ABCA3Q99758 1704 aa27.46■■□□□ 1.99
LINC00943-205ENST00000539315 NWD2Q9ULI1 1742 aa27.45■■□□□ 1.99
LINC00943-205ENST00000539315 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
LINC00943-205ENST00000539315 PLCH1Q4KWH8 1693 aa27.45■■□□□ 1.98
LINC00943-205ENST00000539315 ARHGEF10O15013 1369 aa27.45■■□□□ 1.98
LINC00943-205ENST00000539315 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
LINC00943-205ENST00000539315 DEFB132Q7Z7B7 95 aa27.44■■□□□ 1.98
LINC00943-205ENST00000539315 TRAK1Q9UPV9 953 aa27.42■■□□□ 1.98
LINC00943-205ENST00000539315 ADGRB2O60241 1585 aa27.41■■□□□ 1.98
LINC00943-205ENST00000539315 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
LINC00943-205ENST00000539315 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
LINC00943-205ENST00000539315 CCDC9Q9Y3X0 531 aaKnown RBP27.4■■□□□ 1.98
LINC00943-205ENST00000539315 TRPM3Q9HCF6 1732 aaPredicted RBP27.39■■□□□ 1.98
LINC00943-205ENST00000539315 MINK1Q8N4C8 1332 aaPredicted RBP27.38■■□□□ 1.97
LINC00943-205ENST00000539315 KRT27Q7Z3Y8 459 aa27.37■■□□□ 1.97
LINC00943-205ENST00000539315 KDM2AQ9Y2K7 1162 aa27.36■■□□□ 1.97
LINC00943-205ENST00000539315 ALS2Q96Q42 1657 aa27.35■■□□□ 1.97
LINC00943-205ENST00000539315 NRAPQ86VF7 1730 aa27.33■■□□□ 1.97
LINC00943-205ENST00000539315 WASLO00401 505 aaPredicted RBP27.33■■□□□ 1.97
LINC00943-205ENST00000539315 DCAF11Q8TEB1 546 aa27.33■■□□□ 1.97
LINC00943-205ENST00000539315 BTG4Q9NY30 223 aa27.33■■□□□ 1.97
LINC00943-205ENST00000539315 SF3B2Q13435 895 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms