RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 DIP2AQ14689 1571 aa34.7■■■■□ 3.15
KLHL42-202ENST00000539176 EVC2Q86UK5 1308 aa34.7■■■■□ 3.15
KLHL42-202ENST00000539176 CPS1P31327 1500 aa34.7■■■■□ 3.14
KLHL42-202ENST00000539176 KTN1Q86UP2 1357 aaKnown RBP34.67■■■■□ 3.14
KLHL42-202ENST00000539176 ROBO2Q9HCK4 1378 aa34.67■■■■□ 3.14
KLHL42-202ENST00000539176 CABP2Q9NPB3 220 aa34.66■■■■□ 3.14
KLHL42-202ENST00000539176 NCKAP5LQ9HCH0 1330 aa34.65■■■■□ 3.14
KLHL42-202ENST00000539176 PER1O15534 1290 aaPredicted RBP34.63■■■■□ 3.13
KLHL42-202ENST00000539176 AMOTL2Q9Y2J4 779 aa34.63■■■■□ 3.13
KLHL42-202ENST00000539176 FAM135BQ49AJ0 1406 aa34.63■■■■□ 3.13
KLHL42-202ENST00000539176 MRS2Q9HD23 443 aa34.61■■■■□ 3.13
KLHL42-202ENST00000539176 NPHP4O75161 1426 aaPredicted RBP34.6■■■■□ 3.13
KLHL42-202ENST00000539176 SRPK2P78362 688 aaKnown RBP34.6■■■■□ 3.13
KLHL42-202ENST00000539176 SIRT1Q96EB6 747 aa34.6■■■■□ 3.13
KLHL42-202ENST00000539176 TMC1Q8TDI8 760 aa34.59■■■■□ 3.13
KLHL42-202ENST00000539176 CDK19Q9BWU1 502 aa34.57■■■■□ 3.12
KLHL42-202ENST00000539176 SLC12A5Q9H2X9 1139 aa34.57■■■■□ 3.12
KLHL42-202ENST00000539176 HSPA2P54652 639 aa34.56■■■■□ 3.12
KLHL42-202ENST00000539176 XRN1Q8IZH2 1706 aaKnown RBP34.56■■■■□ 3.12
KLHL42-202ENST00000539176 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.54■■■■□ 3.12
KLHL42-202ENST00000539176 PUS7Q96PZ0 661 aaKnown RBP34.53■■■■□ 3.12
KLHL42-202ENST00000539176 HNRNPUQ00839 825 aaKnown RBP eCLIP34.52■■■■□ 3.12
KLHL42-202ENST00000539176 CCDC184Q52MB2 194 aa34.52■■■■□ 3.12
KLHL42-202ENST00000539176 KCNA6P17658 529 aa34.51■■■■□ 3.12
KLHL42-202ENST00000539176 CHD2O14647 1828 aaKnown RBP34.5■■■■□ 3.11
KLHL42-202ENST00000539176 PIK3R4Q99570 1358 aa34.5■■■■□ 3.11
KLHL42-202ENST00000539176 PTCH1Q13635 1447 aa34.49■■■■□ 3.11
KLHL42-202ENST00000539176 RALBP1Q15311 655 aa34.49■■■■□ 3.11
KLHL42-202ENST00000539176 CC2D1BQ5T0F9 858 aaKnown RBP34.49■■■■□ 3.11
KLHL42-202ENST00000539176 CARD14Q9BXL6 1004 aa34.49■■■■□ 3.11
KLHL42-202ENST00000539176 LMTK3Q96Q04 1460 aa34.48■■■■□ 3.11
KLHL42-202ENST00000539176 KNSTRNQ9Y448 316 aa34.48■■■■□ 3.11
KLHL42-202ENST00000539176 WASLO00401 505 aaPredicted RBP34.47■■■■□ 3.11
KLHL42-202ENST00000539176 ATAD2Q6PL18 1390 aa34.45■■■■□ 3.11
KLHL42-202ENST00000539176 ADGRB2O60241 1585 aa34.42■■■■□ 3.1
KLHL42-202ENST00000539176 AMER1Q5JTC6 1135 aaPredicted RBP34.41■■■■□ 3.1
KLHL42-202ENST00000539176 MYBBP1AQ9BQG0 1328 aaKnown RBP34.4■■■■□ 3.1
KLHL42-202ENST00000539176 BRD4O60885 1362 aaPredicted RBP34.4■■■■□ 3.1
KLHL42-202ENST00000539176 PARD3Q8TEW0 1356 aa34.4■■■■□ 3.1
KLHL42-202ENST00000539176 SUPT16HQ9Y5B9 1047 aaKnown RBP34.39■■■■□ 3.1
KLHL42-202ENST00000539176 NSD3Q9BZ95 1437 aa34.39■■■■□ 3.1
KLHL42-202ENST00000539176 FAM9BQ8IZU0 186 aa34.38■■■■□ 3.09
KLHL42-202ENST00000539176 ANKRD36BQ8N2N9 1353 aa34.37■■■■□ 3.09
KLHL42-202ENST00000539176 CABP1Q9NZU7 370 aa34.37■■■■□ 3.09
KLHL42-202ENST00000539176 RBM33Q96EV2 1170 aaKnown RBP34.36■■■■□ 3.09
KLHL42-202ENST00000539176 ZBED9Q6R2W3 1325 aa34.36■■■■□ 3.09
KLHL42-202ENST00000539176 NINLQ9Y2I6 1382 aa34.35■■■■□ 3.09
KLHL42-202ENST00000539176 A0A1W2PP64 1363 aa34.35■■■■□ 3.09
KLHL42-202ENST00000539176 CD163L1Q9NR16 1453 aa34.35■■■■□ 3.09
KLHL42-202ENST00000539176 NUTM2FA1L443 756 aa34.33■■■■□ 3.09
KLHL42-202ENST00000539176 NUDT16Q96DE0 195 aaKnown RBP34.33■■■■□ 3.09
KLHL42-202ENST00000539176 PRR36Q9H6K5 1346 aa34.33■■■■□ 3.09
KLHL42-202ENST00000539176 STRCQ7RTU9 1775 aa34.31■■■■□ 3.08
KLHL42-202ENST00000539176 ATP7BP35670 1465 aa34.3■■■■□ 3.08
KLHL42-202ENST00000539176 PPIP5K1Q6PFW1 1433 aa34.3■■■■□ 3.08
KLHL42-202ENST00000539176 NWD1Q149M9 1564 aa34.29■■■■□ 3.08
KLHL42-202ENST00000539176 NPC1L1Q9UHC9 1359 aa34.28■■■■□ 3.08
KLHL42-202ENST00000539176 NALCNQ8IZF0 1738 aa34.27■■■■□ 3.08
KLHL42-202ENST00000539176 NEFLP07196 543 aa34.27■■■■□ 3.08
KLHL42-202ENST00000539176 TERF2IPQ9NYB0 399 aa34.27■■■■□ 3.08
KLHL42-202ENST00000539176 NLRP13Q86W25 1043 aa34.26■■■■□ 3.07
KLHL42-202ENST00000539176 USP32Q8NFA0 1604 aa34.24■■■■□ 3.07
KLHL42-202ENST00000539176 PNISRQ8TF01 805 aaKnown RBP34.24■■■■□ 3.07
KLHL42-202ENST00000539176 CCDC61Q9Y6R9 512 aa34.24■■■■□ 3.07
KLHL42-202ENST00000539176 HDGFL2Q7Z4V5 671 aaPredicted RBP34.23■■■■□ 3.07
KLHL42-202ENST00000539176 TOPAZ1Q8N9V7 1692 aa34.22■■■■□ 3.07
KLHL42-202ENST00000539176 STRCP1A6NGW2 1772 aa34.22■■■■□ 3.07
KLHL42-202ENST00000539176 RGPD8O14715 1765 aaPredicted RBP34.21■■■■□ 3.07
KLHL42-202ENST00000539176 CDC42BPGQ6DT37 1551 aa34.19■■■■□ 3.06
KLHL42-202ENST00000539176 CGNL1Q0VF96 1302 aa34.19■■■■□ 3.06
KLHL42-202ENST00000539176 FMN2Q9NZ56 1722 aa34.17■■■■□ 3.06
KLHL42-202ENST00000539176 PPP2R1AP30153 589 aa34.16■■■■□ 3.06
KLHL42-202ENST00000539176 ITSN1Q15811 1721 aa34.16■■■■□ 3.06
KLHL42-202ENST00000539176 CPSF1Q10570 1443 aaKnown RBP34.16■■■■□ 3.06
KLHL42-202ENST00000539176 PROSER2Q86WR7 435 aaPredicted RBP34.16■■■■□ 3.06
KLHL42-202ENST00000539176 NKTRP30414 1462 aaKnown RBP34.15■■■■□ 3.06
KLHL42-202ENST00000539176 ADGRL3Q9HAR2 1447 aa34.14■■■■□ 3.06
KLHL42-202ENST00000539176 AKAP12Q02952 1782 aa34.14■■■■□ 3.06
KLHL42-202ENST00000539176 C14orf37Q86TY3 774 aa34.14■■■■□ 3.06
KLHL42-202ENST00000539176 INSRP06213 1382 aa34.13■■■■□ 3.05
KLHL42-202ENST00000539176 MORC1Q86VD1 984 aa34.12■■■■□ 3.05
KLHL42-202ENST00000539176 FKBP8Q14318 412 aa34.11■■■■□ 3.05
KLHL42-202ENST00000539176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.11■■■■□ 3.05
KLHL42-202ENST00000539176 MON2Q7Z3U7 1717 aa34.11■■■■□ 3.05
KLHL42-202ENST00000539176 TNNT2P45379 298 aaPredicted RBP34.1■■■■□ 3.05
KLHL42-202ENST00000539176 PELP1Q8IZL8 1130 aaKnown RBP34.1■■■■□ 3.05
KLHL42-202ENST00000539176 GGNBP2Q9H3C7 697 aa34.1■■■■□ 3.05
KLHL42-202ENST00000539176 KIF20BQ96Q89 1820 aa34.09■■■■□ 3.05
KLHL42-202ENST00000539176 PMFBP1Q8TBY8 1022 aa34.09■■■■□ 3.05
KLHL42-202ENST00000539176 ACEP12821 1306 aa34.08■■■■□ 3.05
KLHL42-202ENST00000539176 PLEKHG3A1L390 1219 aa34.07■■■■□ 3.05
KLHL42-202ENST00000539176 FYB1O15117 783 aa34.07■■■■□ 3.05
KLHL42-202ENST00000539176 NSD2O96028 1365 aa34.06■■■■□ 3.04
KLHL42-202ENST00000539176 ANKARQ7Z5J8 1434 aa34.06■■■■□ 3.04
KLHL42-202ENST00000539176 EDC4Q6P2E9 1401 aaKnown RBP34.05■■■■□ 3.04
KLHL42-202ENST00000539176 ANKRD26Q9UPS8 1709 aa34.04■■■■□ 3.04
KLHL42-202ENST00000539176 TMEM94Q12767 1356 aa34.02■■■■□ 3.04
KLHL42-202ENST00000539176 SMG6Q86US8 1419 aaKnown RBP34.01■■■■□ 3.04
KLHL42-202ENST00000539176 ZNF692Q9BU19 519 aaPredicted RBP34■■■■□ 3.03
KLHL42-202ENST00000539176 NME9Q86XW9 330 aa33.99■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms