RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 PRR7Q8TB68 274 aa14.31□□□□□ -0.12
CD9-207ENST00000538418 CDCA8Q53HL2 280 aa14.3□□□□□ -0.12
CD9-207ENST00000538418 LRRN4Q8WUT4 740 aa14.3□□□□□ -0.12
CD9-207ENST00000538418 METRNQ9UJH8 293 aa14.3□□□□□ -0.12
CD9-207ENST00000538418 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
CD9-207ENST00000538418 MTMR2Q13614 643 aa14.29□□□□□ -0.12
CD9-207ENST00000538418 KHSRPQ92945 711 aaKnown RBP eCLIP14.29□□□□□ -0.12
CD9-207ENST00000538418 RSPH4AQ5TD94 716 aa14.28□□□□□ -0.12
CD9-207ENST00000538418 PACS2Q86VP3 889 aa14.28□□□□□ -0.12
CD9-207ENST00000538418 TSC1Q92574 1164 aa14.28□□□□□ -0.12
CD9-207ENST00000538418 SHROOM4Q9ULL8 1493 aa14.28□□□□□ -0.12
CD9-207ENST00000538418 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
CD9-207ENST00000538418 ARSIQ5FYB1 569 aa14.27□□□□□ -0.13
CD9-207ENST00000538418 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
CD9-207ENST00000538418 MAFBQ9Y5Q3 323 aaPredicted RBP14.27□□□□□ -0.13
CD9-207ENST00000538418 NACADO15069 1562 aa14.26□□□□□ -0.13
CD9-207ENST00000538418 GABBR2O75899 941 aa14.26□□□□□ -0.13
CD9-207ENST00000538418 GUCA2AQ02747 115 aa14.26□□□□□ -0.13
CD9-207ENST00000538418 SEMA3FQ13275 785 aa14.26□□□□□ -0.13
CD9-207ENST00000538418 EPS8L1Q8TE68 723 aa14.25□□□□□ -0.13
CD9-207ENST00000538418 GNEQ9Y223 722 aaKnown RBP14.25□□□□□ -0.13
CD9-207ENST00000538418 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
CD9-207ENST00000538418 HLA-CQ95604 372 aa14.24□□□□□ -0.13
CD9-207ENST00000538418 PTPREP23469 700 aa14.23□□□□□ -0.13
CD9-207ENST00000538418 B4GALNT3Q6L9W6 998 aa14.23□□□□□ -0.13
CD9-207ENST00000538418 CFAP99D6REC4 459 aa14.22□□□□□ -0.13
CD9-207ENST00000538418 SMAPO00193 183 aa14.21□□□□□ -0.13
CD9-207ENST00000538418 DOK7Q18PE1 504 aa14.21□□□□□ -0.13
CD9-207ENST00000538418 TBC1D9Q6ZT07 1266 aa14.21□□□□□ -0.13
CD9-207ENST00000538418 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
CD9-207ENST00000538418 ATP9BO43861 1147 aa14.19□□□□□ -0.14
CD9-207ENST00000538418 LHX6Q9UPM6 363 aa14.19□□□□□ -0.14
CD9-207ENST00000538418 GPR153Q6NV75 609 aa14.18□□□□□ -0.14
CD9-207ENST00000538418 SLF2Q8IX21 1173 aa14.18□□□□□ -0.14
CD9-207ENST00000538418 PNMA1Q8ND90 353 aa14.18□□□□□ -0.14
CD9-207ENST00000538418 ZSWIM6Q9HCJ5 1215 aa14.18□□□□□ -0.14
CD9-207ENST00000538418 PSDA5PKW4 1024 aaPredicted RBP14.17□□□□□ -0.14
CD9-207ENST00000538418 SLC10A3P09131 477 aa14.17□□□□□ -0.14
CD9-207ENST00000538418 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
CD9-207ENST00000538418 RIMBP2O15034 1052 aa14.16□□□□□ -0.14
CD9-207ENST00000538418 EIF4G2P78344 907 aaKnown RBP eCLIP14.16□□□□□ -0.14
CD9-207ENST00000538418 ELOAQ14241 798 aaKnown RBP14.16□□□□□ -0.14
CD9-207ENST00000538418 NR6A1Q15406 480 aa14.15□□□□□ -0.14
CD9-207ENST00000538418 CCER1Q8TC90 406 aaPredicted RBP14.14□□□□□ -0.15
CD9-207ENST00000538418 HOXB3P14651 431 aaPredicted RBP14.13□□□□□ -0.15
CD9-207ENST00000538418 KANK4Q5T7N3 995 aaPredicted RBP14.13□□□□□ -0.15
CD9-207ENST00000538418 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
CD9-207ENST00000538418 GRIPAP1Q4V328 841 aa14.12□□□□□ -0.15
CD9-207ENST00000538418 UNCXA6NJT0 531 aa14.11□□□□□ -0.15
CD9-207ENST00000538418 PROX2Q3B8N5 592 aa14.11□□□□□ -0.15
CD9-207ENST00000538418 TMEM164Q5U3C3 297 aa14.1□□□□□ -0.15
CD9-207ENST00000538418 TXNDC2Q86VQ3 553 aa14.1□□□□□ -0.15
CD9-207ENST00000538418 ZMIZ1Q9ULJ6 1067 aa14.1□□□□□ -0.15
CD9-207ENST00000538418 RBM47A0AV96 593 aaKnown RBP14.09□□□□□ -0.15
CD9-207ENST00000538418 SWT1Q5T5J6 900 aaKnown RBP14.09□□□□□ -0.15
CD9-207ENST00000538418 STK32AQ8WU08 396 aa14.07□□□□□ -0.16
CD9-207ENST00000538418 PER1O15534 1290 aaPredicted RBP14.06□□□□□ -0.16
CD9-207ENST00000538418 FUT2Q10981 343 aa14.06□□□□□ -0.16
CD9-207ENST00000538418 NR1H3Q13133 447 aa14.06□□□□□ -0.16
CD9-207ENST00000538418 SYMPKQ92797 1274 aaKnown RBP14.06□□□□□ -0.16
CD9-207ENST00000538418 NOVA2Q9UNW9 492 aaKnown RBP14.06□□□□□ -0.16
CD9-207ENST00000538418 KIAA1468Q9P260 1216 aa14.05□□□□□ -0.16
CD9-207ENST00000538418 PHLDB3Q6NSJ2 640 aa14.04□□□□□ -0.16
CD9-207ENST00000538418 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
CD9-207ENST00000538418 PIK3CDO00329 1044 aa14.03□□□□□ -0.16
CD9-207ENST00000538418 ERCC3P19447 782 aa14.02□□□□□ -0.17
CD9-207ENST00000538418 USP17L3A6NCW0 530 aa14.01□□□□□ -0.17
CD9-207ENST00000538418 USP17L4A6NCW7 530 aa14.01□□□□□ -0.17
CD9-207ENST00000538418 ARID4AP29374 1257 aaPredicted RBP14.01□□□□□ -0.17
CD9-207ENST00000538418 USP17L2Q6R6M4 530 aa14.01□□□□□ -0.17
CD9-207ENST00000538418 USP17L1Q7RTZ2 530 aa14.01□□□□□ -0.17
CD9-207ENST00000538418 ATP6V1AP38606 617 aa14□□□□□ -0.17
CD9-207ENST00000538418 SLC4A3P48751 1232 aa14□□□□□ -0.17
CD9-207ENST00000538418 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
CD9-207ENST00000538418 IGSF5Q9NSI5 407 aa14□□□□□ -0.17
CD9-207ENST00000538418 USP35Q9P2H5 1018 aa14□□□□□ -0.17
CD9-207ENST00000538418 FBXO45P0C2W1 286 aa13.99□□□□□ -0.17
CD9-207ENST00000538418 SSFA2P28290 1259 aa13.99□□□□□ -0.17
CD9-207ENST00000538418 DNAJC14Q6Y2X3 702 aaPredicted RBP13.99□□□□□ -0.17
CD9-207ENST00000538418 RETREG3Q86VR2 466 aa13.99□□□□□ -0.17
CD9-207ENST00000538418 PLEKHM2Q8IWE5 1019 aa13.99□□□□□ -0.17
CD9-207ENST00000538418 SKIP12755 728 aa13.98□□□□□ -0.17
CD9-207ENST00000538418 DESI1Q6ICB0 168 aa13.98□□□□□ -0.17
CD9-207ENST00000538418 KCNK17Q96T54 332 aa13.98□□□□□ -0.17
CD9-207ENST00000538418 FAM196BA6NMK8 535 aa13.97□□□□□ -0.17
CD9-207ENST00000538418 ZBBXA8MT70 800 aa13.97□□□□□ -0.17
CD9-207ENST00000538418 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
CD9-207ENST00000538418 USP17L5A8MUK1 530 aa13.96□□□□□ -0.17
CD9-207ENST00000538418 CFHP08603 1231 aa13.96□□□□□ -0.17
CD9-207ENST00000538418 USP17L15C9J2P7 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L10C9JJH3 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L13C9JLJ4 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L12C9JPN9 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L11C9JVI0 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L21D6R901 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L18D6R9N7 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L22D6RA61 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L17D6RBQ6 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L19D6RCP7 530 aa13.95□□□□□ -0.18
CD9-207ENST00000538418 USP17L20D6RJB6 530 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms