RNA–Protein interactions for RNA: ENST00000538354.5

TULP3-203, Transcript of tubby like protein 3, humanhuman

TSL 1 (best)

Gene TULP3, Length 1,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-203ENST00000538354 PIK3C2GO75747 1445 aa28.87■■■□□ 2.21
TULP3-203ENST00000538354 PLEKHH1Q9ULM0 1364 aa28.87■■■□□ 2.21
TULP3-203ENST00000538354 CDC42BPGQ6DT37 1551 aa28.86■■■□□ 2.21
TULP3-203ENST00000538354 LRPPRCP42704 1394 aaKnown RBP28.86■■■□□ 2.21
TULP3-203ENST00000538354 C8orf37Q96NL8 207 aa28.85■■■□□ 2.21
TULP3-203ENST00000538354 NUTM2FA1L443 756 aa28.84■■■□□ 2.21
TULP3-203ENST00000538354 SOS2Q07890 1332 aaPredicted RBP28.84■■■□□ 2.21
TULP3-203ENST00000538354 KNDC1Q76NI1 1749 aa28.83■■■□□ 2.21
TULP3-203ENST00000538354 TECPR2O15040 1411 aa28.83■■■□□ 2.21
TULP3-203ENST00000538354 ADAMTS2O95450 1211 aa28.82■■■□□ 2.2
TULP3-203ENST00000538354 HRCP23327 699 aa28.82■■■□□ 2.2
TULP3-203ENST00000538354 ESCO1Q5FWF5 840 aa28.82■■■□□ 2.2
TULP3-203ENST00000538354 RXRBP28702 533 aa28.8■■■□□ 2.2
TULP3-203ENST00000538354 YTHDC2Q9H6S0 1430 aaKnown RBP28.79■■■□□ 2.2
TULP3-203ENST00000538354 ABCC11Q96J66 1382 aa28.79■■■□□ 2.2
TULP3-203ENST00000538354 XPCQ01831 940 aaPredicted RBP28.78■■■□□ 2.2
TULP3-203ENST00000538354 CFAP70Q5T0N1 1121 aa28.77■■■□□ 2.2
TULP3-203ENST00000538354 C14orf93Q9H972 538 aaKnown RBP28.75■■■□□ 2.19
TULP3-203ENST00000538354 NRXN1Q9ULB1 1477 aa28.74■■■□□ 2.19
TULP3-203ENST00000538354 FOXO3O43524 673 aa28.74■■■□□ 2.19
TULP3-203ENST00000538354 FMN2Q9NZ56 1722 aa28.74■■■□□ 2.19
TULP3-203ENST00000538354 MYOM2P54296 1465 aa28.73■■■□□ 2.19
TULP3-203ENST00000538354 PXDNQ92626 1479 aa28.73■■■□□ 2.19
TULP3-203ENST00000538354 NGLY1Q96IV0 654 aa28.73■■■□□ 2.19
TULP3-203ENST00000538354 NPHP3Q7Z494 1330 aa28.72■■■□□ 2.19
TULP3-203ENST00000538354 QTRT2Q9H974 415 aaKnown RBP28.72■■■□□ 2.19
TULP3-203ENST00000538354 COL22A1Q8NFW1 1626 aaPredicted RBP28.71■■■□□ 2.19
TULP3-203ENST00000538354 SAFB2Q14151 953 aaKnown RBP eCLIP28.69■■■□□ 2.18
TULP3-203ENST00000538354 RGPD8O14715 1765 aaPredicted RBP28.68■■■□□ 2.18
TULP3-203ENST00000538354 UPF1Q92900 1129 aaKnown RBP eCLIP28.68■■■□□ 2.18
TULP3-203ENST00000538354 CDK12Q9NYV4 1490 aaPredicted RBP28.67■■■□□ 2.18
TULP3-203ENST00000538354 DHX57Q6P158 1386 aaKnown RBP28.67■■■□□ 2.18
TULP3-203ENST00000538354 RGS12O14924 1447 aa28.67■■■□□ 2.18
TULP3-203ENST00000538354 RBM6P78332 1123 aaKnown RBP28.65■■■□□ 2.18
TULP3-203ENST00000538354 PRAM1Q96QH2 718 aa28.64■■■□□ 2.18
TULP3-203ENST00000538354 SIRT1Q96EB6 747 aa28.63■■■□□ 2.17
TULP3-203ENST00000538354 USP21Q9UK80 565 aa28.63■■■□□ 2.17
TULP3-203ENST00000538354 KDM2AQ9Y2K7 1162 aa28.63■■■□□ 2.17
TULP3-203ENST00000538354 KIF1AQ12756 1690 aa28.62■■■□□ 2.17
TULP3-203ENST00000538354 MARF1Q9Y4F3 1742 aaKnown RBP28.6■■■□□ 2.17
TULP3-203ENST00000538354 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
TULP3-203ENST00000538354 ADGRB1O14514 1584 aa28.58■■■□□ 2.17
TULP3-203ENST00000538354 DCAF11Q8TEB1 546 aa28.58■■■□□ 2.17
TULP3-203ENST00000538354 FNBP4Q8N3X1 1017 aaPredicted RBP28.57■■■□□ 2.16
TULP3-203ENST00000538354 POGKQ9P215 609 aa28.57■■■□□ 2.16
TULP3-203ENST00000538354 KRT28Q7Z3Y7 464 aa28.56■■■□□ 2.16
TULP3-203ENST00000538354 DLC1Q96QB1 1528 aa28.56■■■□□ 2.16
TULP3-203ENST00000538354 PHF8Q9UPP1 1060 aa28.56■■■□□ 2.16
TULP3-203ENST00000538354 TRAK1Q9UPV9 953 aa28.56■■■□□ 2.16
TULP3-203ENST00000538354 SPATA31A3Q5VYP0 1347 aa28.55■■■□□ 2.16
TULP3-203ENST00000538354 PLEKHG5O94827 1062 aa28.54■■■□□ 2.16
TULP3-203ENST00000538354 TRPC5Q9UL62 973 aaPredicted RBP28.54■■■□□ 2.16
TULP3-203ENST00000538354 ATRNO75882 1429 aa28.53■■■□□ 2.16
TULP3-203ENST00000538354 HIRIP3Q9BW71 556 aaPredicted RBP28.53■■■□□ 2.16
TULP3-203ENST00000538354 USP32Q8NFA0 1604 aa28.53■■■□□ 2.16
TULP3-203ENST00000538354 BCL9LQ86UU0 1499 aa28.52■■■□□ 2.16
TULP3-203ENST00000538354 MINK1Q8N4C8 1332 aaPredicted RBP28.49■■■□□ 2.15
TULP3-203ENST00000538354 PMFBP1Q8TBY8 1022 aa28.49■■■□□ 2.15
TULP3-203ENST00000538354 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
TULP3-203ENST00000538354 ADGRB2O60241 1585 aa28.48■■■□□ 2.15
TULP3-203ENST00000538354 CABLES1Q8TDN4 633 aa28.47■■■□□ 2.15
TULP3-203ENST00000538354 LMOD2Q6P5Q4 547 aa28.45■■■□□ 2.14
TULP3-203ENST00000538354 PSME1Q06323 249 aa28.44■■■□□ 2.14
TULP3-203ENST00000538354 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
TULP3-203ENST00000538354 PRR36Q9H6K5 1346 aa28.43■■■□□ 2.14
TULP3-203ENST00000538354 HAP1P54257 671 aaPredicted RBP28.42■■■□□ 2.14
TULP3-203ENST00000538354 ABCA3Q99758 1704 aa28.41■■■□□ 2.14
TULP3-203ENST00000538354 SLIT2O94813 1529 aa28.41■■■□□ 2.14
TULP3-203ENST00000538354 ARHGEF28Q8N1W1 1705 aaKnown RBP28.4■■■□□ 2.14
TULP3-203ENST00000538354 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.4■■■□□ 2.14
TULP3-203ENST00000538354 SBNO1A3KN83 1393 aa28.4■■■□□ 2.14
TULP3-203ENST00000538354 GJD4Q96KN9 370 aaPredicted RBP28.39■■■□□ 2.14
TULP3-203ENST00000538354 ATAD2Q6PL18 1390 aa28.38■■■□□ 2.13
TULP3-203ENST00000538354 UNC5CLQ8IV45 518 aa28.38■■■□□ 2.13
TULP3-203ENST00000538354 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
TULP3-203ENST00000538354 TRPM3Q9HCF6 1732 aaPredicted RBP28.38■■■□□ 2.13
TULP3-203ENST00000538354 WASLO00401 505 aaPredicted RBP28.37■■■□□ 2.13
TULP3-203ENST00000538354 GLI3P10071 1580 aa28.37■■■□□ 2.13
TULP3-203ENST00000538354 STAC3Q96MF2 364 aa28.36■■■□□ 2.13
TULP3-203ENST00000538354 PLCH1Q4KWH8 1693 aa28.35■■■□□ 2.13
TULP3-203ENST00000538354 RALGAPBQ86X10 1494 aa28.35■■■□□ 2.13
TULP3-203ENST00000538354 ARHGEF10O15013 1369 aa28.34■■■□□ 2.13
TULP3-203ENST00000538354 EIF3AQ14152 1382 aaKnown RBP28.32■■■□□ 2.12
TULP3-203ENST00000538354 ALS2Q96Q42 1657 aa28.31■■■□□ 2.12
TULP3-203ENST00000538354 GPRASP1Q5JY77 1395 aa28.3■■■□□ 2.12
TULP3-203ENST00000538354 BRWD3Q6RI45 1802 aa28.28■■■□□ 2.12
TULP3-203ENST00000538354 NGDNQ8NEJ9 315 aaKnown RBP28.28■■■□□ 2.12
TULP3-203ENST00000538354 NWD2Q9ULI1 1742 aa28.28■■■□□ 2.12
TULP3-203ENST00000538354 FAM83GA6ND36 823 aa28.27■■■□□ 2.12
TULP3-203ENST00000538354 NBPF1Q3BBV0 1214 aa28.27■■■□□ 2.12
TULP3-203ENST00000538354 ATP7BP35670 1465 aa28.27■■■□□ 2.12
TULP3-203ENST00000538354 CCDC9Q9Y3X0 531 aaKnown RBP28.26■■■□□ 2.11
TULP3-203ENST00000538354 ITSN1Q15811 1721 aa28.26■■■□□ 2.11
TULP3-203ENST00000538354 KIAA1210Q9ULL0 1709 aa28.26■■■□□ 2.11
TULP3-203ENST00000538354 EP400Q96L91 3159 aa28.25■■■□□ 2.11
TULP3-203ENST00000538354 PAK3O75914 559 aaPredicted RBP28.25■■■□□ 2.11
TULP3-203ENST00000538354 NUDT16Q96DE0 195 aaKnown RBP28.25■■■□□ 2.11
TULP3-203ENST00000538354 VPS72Q15906 364 aa28.24■■■□□ 2.11
TULP3-203ENST00000538354 CDK19Q9BWU1 502 aa28.23■■■□□ 2.11
TULP3-203ENST00000538354 NRAPQ86VF7 1730 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms