RNA–Protein interactions for RNA: ENST00000538258.1

PGA3-204, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2 BASIC

Gene PGA3, Length 867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-204ENST00000538258 ROBO1Q9Y6N7 1651 aa13.02□□□□□ -0.32
PGA3-204ENST00000538258 POTEAQ6S8J7 498 aa13.02□□□□□ -0.33
PGA3-204ENST00000538258 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
PGA3-204ENST00000538258 TRAK1Q9UPV9 953 aa13.02□□□□□ -0.33
PGA3-204ENST00000538258 PLEKHH1Q9ULM0 1364 aa13.02□□□□□ -0.33
PGA3-204ENST00000538258 DLC1Q96QB1 1528 aa13.02□□□□□ -0.33
PGA3-204ENST00000538258 CCER1Q8TC90 406 aaPredicted RBP13.01□□□□□ -0.33
PGA3-204ENST00000538258 PRAM1Q96QH2 718 aa13.01□□□□□ -0.33
PGA3-204ENST00000538258 POGKQ9P215 609 aa13.01□□□□□ -0.33
PGA3-204ENST00000538258 CLSPNQ9HAW4 1339 aa13.01□□□□□ -0.33
PGA3-204ENST00000538258 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
PGA3-204ENST00000538258 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
PGA3-204ENST00000538258 TRPM1Q7Z4N2 1603 aa12.99□□□□□ -0.33
PGA3-204ENST00000538258 CDC42BPGQ6DT37 1551 aa12.99□□□□□ -0.33
PGA3-204ENST00000538258 MST1RQ04912 1400 aa12.99□□□□□ -0.33
PGA3-204ENST00000538258 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
PGA3-204ENST00000538258 NBPF8Q3BBV2 869 aa12.97□□□□□ -0.33
PGA3-204ENST00000538258 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.33
PGA3-204ENST00000538258 BRINP3Q76B58 766 aa12.96□□□□□ -0.33
PGA3-204ENST00000538258 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
PGA3-204ENST00000538258 PHLPP1O60346 1717 aa12.96□□□□□ -0.34
PGA3-204ENST00000538258 MINK1Q8N4C8 1332 aaPredicted RBP12.95□□□□□ -0.34
PGA3-204ENST00000538258 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
PGA3-204ENST00000538258 NUTM2FA1L443 756 aa12.94□□□□□ -0.34
PGA3-204ENST00000538258 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
PGA3-204ENST00000538258 HIRIP3Q9BW71 556 aaPredicted RBP12.93□□□□□ -0.34
PGA3-204ENST00000538258 RALGAPBQ86X10 1494 aa12.92□□□□□ -0.34
PGA3-204ENST00000538258 AHDC1Q5TGY3 1603 aaPredicted RBP12.92□□□□□ -0.34
PGA3-204ENST00000538258 RGPD8O14715 1765 aaPredicted RBP12.92□□□□□ -0.34
PGA3-204ENST00000538258 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
PGA3-204ENST00000538258 ORAI2Q96SN7 254 aa12.92□□□□□ -0.34
PGA3-204ENST00000538258 TIMELESSQ9UNS1 1208 aa12.92□□□□□ -0.34
PGA3-204ENST00000538258 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
PGA3-204ENST00000538258 CARD11Q9BXL7 1154 aa12.91□□□□□ -0.34
PGA3-204ENST00000538258 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
PGA3-204ENST00000538258 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
PGA3-204ENST00000538258 QRICH2Q9H0J4 1663 aa12.9□□□□□ -0.34
PGA3-204ENST00000538258 COL16A1Q07092 1604 aaPredicted RBP12.9□□□□□ -0.34
PGA3-204ENST00000538258 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
PGA3-204ENST00000538258 DDX17Q92841 729 aaKnown RBP12.89□□□□□ -0.35
PGA3-204ENST00000538258 EIF3AQ14152 1382 aaKnown RBP12.89□□□□□ -0.35
PGA3-204ENST00000538258 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
PGA3-204ENST00000538258 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
PGA3-204ENST00000538258 KIF1AQ12756 1690 aa12.88□□□□□ -0.35
PGA3-204ENST00000538258 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
PGA3-204ENST00000538258 TULP4Q9NRJ4 1543 aa12.88□□□□□ -0.35
PGA3-204ENST00000538258 FOXO3O43524 673 aa12.86□□□□□ -0.35
PGA3-204ENST00000538258 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
PGA3-204ENST00000538258 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
PGA3-204ENST00000538258 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
PGA3-204ENST00000538258 JCADQ9P266 1359 aa12.85□□□□□ -0.35
PGA3-204ENST00000538258 PRR36Q9H6K5 1346 aa12.85□□□□□ -0.35
PGA3-204ENST00000538258 ITSN1Q15811 1721 aa12.85□□□□□ -0.35
PGA3-204ENST00000538258 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
PGA3-204ENST00000538258 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
PGA3-204ENST00000538258 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
PGA3-204ENST00000538258 SHPRHQ149N8 1683 aa12.83□□□□□ -0.35
PGA3-204ENST00000538258 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
PGA3-204ENST00000538258 XPCQ01831 940 aaPredicted RBP12.83□□□□□ -0.36
PGA3-204ENST00000538258 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
PGA3-204ENST00000538258 PMFBP1Q8TBY8 1022 aa12.83□□□□□ -0.36
PGA3-204ENST00000538258 ATP7BP35670 1465 aa12.83□□□□□ -0.36
PGA3-204ENST00000538258 EVC2Q86UK5 1308 aa12.83□□□□□ -0.36
PGA3-204ENST00000538258 PXDNQ92626 1479 aa12.82□□□□□ -0.36
PGA3-204ENST00000538258 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
PGA3-204ENST00000538258 PSME1Q06323 249 aa12.81□□□□□ -0.36
PGA3-204ENST00000538258 KRT28Q7Z3Y7 464 aa12.81□□□□□ -0.36
PGA3-204ENST00000538258 CABP2Q9NPB3 220 aa12.81□□□□□ -0.36
PGA3-204ENST00000538258 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
PGA3-204ENST00000538258 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
PGA3-204ENST00000538258 SPATA31A6Q5VVP1 1343 aa12.8□□□□□ -0.36
PGA3-204ENST00000538258 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
PGA3-204ENST00000538258 USP47Q96K76 1375 aa12.8□□□□□ -0.36
PGA3-204ENST00000538258 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
PGA3-204ENST00000538258 ST20-MTHFSA0A0A6YYL1 179 aa12.79□□□□□ -0.36
PGA3-204ENST00000538258 NUTM2BA6NNL0 878 aaPredicted RBP12.78□□□□□ -0.36
PGA3-204ENST00000538258 NUTM2EB1AL46 878 aaPredicted RBP12.78□□□□□ -0.36
PGA3-204ENST00000538258 NUTM2AQ8IVF1 878 aaPredicted RBP12.78□□□□□ -0.36
PGA3-204ENST00000538258 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
PGA3-204ENST00000538258 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
PGA3-204ENST00000538258 ACEP12821 1306 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 SPATA31A3Q5VYP0 1347 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 SBNO1A3KN83 1393 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 LRP6O75581 1613 aa12.76□□□□□ -0.37
PGA3-204ENST00000538258 COL22A1Q8NFW1 1626 aaPredicted RBP12.76□□□□□ -0.37
PGA3-204ENST00000538258 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
PGA3-204ENST00000538258 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
PGA3-204ENST00000538258 LMOD2Q6P5Q4 547 aa12.75□□□□□ -0.37
PGA3-204ENST00000538258 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
PGA3-204ENST00000538258 TESK2Q96S53 571 aa12.75□□□□□ -0.37
PGA3-204ENST00000538258 TRPM3Q9HCF6 1732 aaPredicted RBP12.75□□□□□ -0.37
PGA3-204ENST00000538258 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
PGA3-204ENST00000538258 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
PGA3-204ENST00000538258 ARHGEF10O15013 1369 aa12.73□□□□□ -0.37
PGA3-204ENST00000538258 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
PGA3-204ENST00000538258 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
PGA3-204ENST00000538258 ALS2Q96Q42 1657 aa12.72□□□□□ -0.37
PGA3-204ENST00000538258 ADAMTS2O95450 1211 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms