RNA–Protein interactions for RNA: ENST00000537888.1

PEX11B-203, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

TSL 2 BASIC

Gene PEX11B, Length 1,632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-203ENST00000537888 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
PEX11B-203ENST00000537888 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
PEX11B-203ENST00000537888 CDC42BPGQ6DT37 1551 aa18.15■□□□□ 0.5
PEX11B-203ENST00000537888 PLEKHH1Q9ULM0 1364 aa18.14■□□□□ 0.49
PEX11B-203ENST00000537888 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.49
PEX11B-203ENST00000537888 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
PEX11B-203ENST00000537888 STAC3Q96MF2 364 aa18.13■□□□□ 0.49
PEX11B-203ENST00000537888 STK26Q9P289 416 aa18.13■□□□□ 0.49
PEX11B-203ENST00000537888 NHSL1Q5SYE7 1610 aa18.12■□□□□ 0.49
PEX11B-203ENST00000537888 WAPLQ7Z5K2 1190 aa18.12■□□□□ 0.49
PEX11B-203ENST00000537888 L3MBTL2Q969R5 705 aa18.12■□□□□ 0.49
PEX11B-203ENST00000537888 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
PEX11B-203ENST00000537888 DLC1Q96QB1 1528 aa18.11■□□□□ 0.49
PEX11B-203ENST00000537888 KDM2AQ9Y2K7 1162 aa18.09■□□□□ 0.49
PEX11B-203ENST00000537888 JCADQ9P266 1359 aa18.09■□□□□ 0.49
PEX11B-203ENST00000537888 ILDR2Q71H61 639 aa18.09■□□□□ 0.49
PEX11B-203ENST00000537888 SHPRHQ149N8 1683 aa18.05■□□□□ 0.48
PEX11B-203ENST00000537888 CENPBP07199 599 aaPredicted RBP18.05■□□□□ 0.48
PEX11B-203ENST00000537888 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
PEX11B-203ENST00000537888 FMN2Q9NZ56 1722 aa18.04■□□□□ 0.48
PEX11B-203ENST00000537888 DDX17Q92841 729 aaKnown RBP18.03■□□□□ 0.48
PEX11B-203ENST00000537888 PRAM1Q96QH2 718 aa18.03■□□□□ 0.48
PEX11B-203ENST00000537888 KIAA1210Q9ULL0 1709 aa18.03■□□□□ 0.48
PEX11B-203ENST00000537888 ADGRB2O60241 1585 aa18.03■□□□□ 0.48
PEX11B-203ENST00000537888 LRP6O75581 1613 aa18.02■□□□□ 0.48
PEX11B-203ENST00000537888 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
PEX11B-203ENST00000537888 SPATA31A6Q5VVP1 1343 aa18■□□□□ 0.47
PEX11B-203ENST00000537888 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
PEX11B-203ENST00000537888 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
PEX11B-203ENST00000537888 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
PEX11B-203ENST00000537888 EIF4G2P78344 907 aaKnown RBP eCLIP17.98■□□□□ 0.47
PEX11B-203ENST00000537888 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
PEX11B-203ENST00000537888 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
PEX11B-203ENST00000537888 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
PEX11B-203ENST00000537888 PXDNQ92626 1479 aa17.97■□□□□ 0.47
PEX11B-203ENST00000537888 PNPLA6Q8IY17 1366 aa17.97■□□□□ 0.47
PEX11B-203ENST00000537888 LRRC59Q96AG4 307 aaKnown RBP17.97■□□□□ 0.47
PEX11B-203ENST00000537888 NUTM2FA1L443 756 aa17.96■□□□□ 0.47
PEX11B-203ENST00000537888 HSPA5P11021 654 aaKnown RBP17.96■□□□□ 0.47
PEX11B-203ENST00000537888 DDX10Q13206 875 aaKnown RBP17.96■□□□□ 0.47
PEX11B-203ENST00000537888 ESCO1Q5FWF5 840 aa17.96■□□□□ 0.47
PEX11B-203ENST00000537888 POGKQ9P215 609 aa17.96■□□□□ 0.47
PEX11B-203ENST00000537888 USP32Q8NFA0 1604 aa17.96■□□□□ 0.47
PEX11B-203ENST00000537888 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
PEX11B-203ENST00000537888 KIF1AQ12756 1690 aa17.94■□□□□ 0.46
PEX11B-203ENST00000537888 NPHP3Q7Z494 1330 aa17.94■□□□□ 0.46
PEX11B-203ENST00000537888 ANKARQ7Z5J8 1434 aa17.94■□□□□ 0.46
PEX11B-203ENST00000537888 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
PEX11B-203ENST00000537888 RGPD8O14715 1765 aaPredicted RBP17.92■□□□□ 0.46
PEX11B-203ENST00000537888 TRPM1Q7Z4N2 1603 aa17.91■□□□□ 0.46
PEX11B-203ENST00000537888 FOXO3O43524 673 aa17.91■□□□□ 0.46
PEX11B-203ENST00000537888 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
PEX11B-203ENST00000537888 TULP4Q9NRJ4 1543 aa17.91■□□□□ 0.46
PEX11B-203ENST00000537888 COL22A1Q8NFW1 1626 aaPredicted RBP17.91■□□□□ 0.46
PEX11B-203ENST00000537888 PRR36Q9H6K5 1346 aa17.9■□□□□ 0.46
PEX11B-203ENST00000537888 RALGAPBQ86X10 1494 aa17.9■□□□□ 0.46
PEX11B-203ENST00000537888 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
PEX11B-203ENST00000537888 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
PEX11B-203ENST00000537888 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
PEX11B-203ENST00000537888 EIF3AQ14152 1382 aaKnown RBP17.88■□□□□ 0.45
PEX11B-203ENST00000537888 SOCS7O14512 581 aa17.87■□□□□ 0.45
PEX11B-203ENST00000537888 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
PEX11B-203ENST00000537888 ATP7BP35670 1465 aa17.87■□□□□ 0.45
PEX11B-203ENST00000537888 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
PEX11B-203ENST00000537888 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
PEX11B-203ENST00000537888 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
PEX11B-203ENST00000537888 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
PEX11B-203ENST00000537888 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
PEX11B-203ENST00000537888 GPRASP1Q5JY77 1395 aa17.85■□□□□ 0.45
PEX11B-203ENST00000537888 SPATA31A3Q5VYP0 1347 aa17.84■□□□□ 0.45
PEX11B-203ENST00000537888 MEX3CQ5U5Q3 659 aaKnown RBP17.83■□□□□ 0.45
PEX11B-203ENST00000537888 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.45
PEX11B-203ENST00000537888 CCDC7Q96M83 1385 aa17.83■□□□□ 0.45
PEX11B-203ENST00000537888 ANP32CO43423 234 aa17.83■□□□□ 0.44
PEX11B-203ENST00000537888 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
PEX11B-203ENST00000537888 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
PEX11B-203ENST00000537888 SBNO1A3KN83 1393 aa17.82■□□□□ 0.44
PEX11B-203ENST00000537888 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
PEX11B-203ENST00000537888 TNS3Q68CZ2 1445 aa17.82■□□□□ 0.44
PEX11B-203ENST00000537888 TOPAZ1Q8N9V7 1692 aa17.82■□□□□ 0.44
PEX11B-203ENST00000537888 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
PEX11B-203ENST00000537888 QRICH2Q9H0J4 1663 aa17.81■□□□□ 0.44
PEX11B-203ENST00000537888 TRPM3Q9HCF6 1732 aaPredicted RBP17.81■□□□□ 0.44
PEX11B-203ENST00000537888 USP47Q96K76 1375 aa17.8■□□□□ 0.44
PEX11B-203ENST00000537888 ITSN1Q15811 1721 aa17.8■□□□□ 0.44
PEX11B-203ENST00000537888 CDK19Q9BWU1 502 aa17.8■□□□□ 0.44
PEX11B-203ENST00000537888 AFF2P51816 1311 aa17.79■□□□□ 0.44
PEX11B-203ENST00000537888 ZNF772Q68DY9 489 aaPredicted RBP17.79■□□□□ 0.44
PEX11B-203ENST00000537888 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
PEX11B-203ENST00000537888 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
PEX11B-203ENST00000537888 C11orf95C9JLR9 678 aaPredicted RBP17.77■□□□□ 0.44
PEX11B-203ENST00000537888 PSME1Q06323 249 aa17.77■□□□□ 0.44
PEX11B-203ENST00000537888 C8orf37Q96NL8 207 aa17.77■□□□□ 0.44
PEX11B-203ENST00000537888 ALS2Q96Q42 1657 aa17.76■□□□□ 0.43
PEX11B-203ENST00000537888 POLR3AO14802 1390 aaPredicted RBP17.75■□□□□ 0.43
PEX11B-203ENST00000537888 CCDC61Q9Y6R9 512 aa17.75■□□□□ 0.43
PEX11B-203ENST00000537888 ABCA3Q99758 1704 aa17.75■□□□□ 0.43
PEX11B-203ENST00000537888 MARF1Q9Y4F3 1742 aaKnown RBP17.75■□□□□ 0.43
PEX11B-203ENST00000537888 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
PEX11B-203ENST00000537888 KIF7Q2M1P5 1343 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms