RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 LRPPRCP42704 1394 aaKnown RBP14.36□□□□□ -0.11
CHD4-207ENST00000537634 STK26Q9P289 416 aa14.36□□□□□ -0.11
CHD4-207ENST00000537634 RXRBP28702 533 aa14.35□□□□□ -0.11
CHD4-207ENST00000537634 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
CHD4-207ENST00000537634 SOS2Q07890 1332 aaPredicted RBP14.35□□□□□ -0.11
CHD4-207ENST00000537634 ABCC11Q96J66 1382 aa14.34□□□□□ -0.11
CHD4-207ENST00000537634 CDK12Q9NYV4 1490 aaPredicted RBP14.33□□□□□ -0.12
CHD4-207ENST00000537634 ESCO1Q5FWF5 840 aa14.33□□□□□ -0.12
CHD4-207ENST00000537634 TMEM132EQ6IEE7 984 aa14.33□□□□□ -0.12
CHD4-207ENST00000537634 NPHP3Q7Z494 1330 aa14.33□□□□□ -0.12
CHD4-207ENST00000537634 RAB3GAP2Q9H2M9 1393 aa14.33□□□□□ -0.12
CHD4-207ENST00000537634 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
CHD4-207ENST00000537634 MYOM2P54296 1465 aa14.32□□□□□ -0.12
CHD4-207ENST00000537634 ADAMTS2O95450 1211 aa14.32□□□□□ -0.12
CHD4-207ENST00000537634 WAPLQ7Z5K2 1190 aa14.32□□□□□ -0.12
CHD4-207ENST00000537634 COL22A1Q8NFW1 1626 aaPredicted RBP14.32□□□□□ -0.12
CHD4-207ENST00000537634 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
CHD4-207ENST00000537634 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
CHD4-207ENST00000537634 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
CHD4-207ENST00000537634 NGLY1Q96IV0 654 aa14.3□□□□□ -0.12
CHD4-207ENST00000537634 PXDNQ92626 1479 aa14.3□□□□□ -0.12
CHD4-207ENST00000537634 KIF1AQ12756 1690 aa14.3□□□□□ -0.12
CHD4-207ENST00000537634 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
CHD4-207ENST00000537634 QTRT2Q9H974 415 aaKnown RBP14.29□□□□□ -0.12
CHD4-207ENST00000537634 FOXO3O43524 673 aa14.28□□□□□ -0.12
CHD4-207ENST00000537634 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
CHD4-207ENST00000537634 C14orf93Q9H972 538 aaKnown RBP14.28□□□□□ -0.12
CHD4-207ENST00000537634 RBM6P78332 1123 aaKnown RBP14.27□□□□□ -0.13
CHD4-207ENST00000537634 XPCQ01831 940 aaPredicted RBP14.27□□□□□ -0.13
CHD4-207ENST00000537634 MARF1Q9Y4F3 1742 aaKnown RBP14.27□□□□□ -0.13
CHD4-207ENST00000537634 RGS12O14924 1447 aa14.26□□□□□ -0.13
CHD4-207ENST00000537634 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
CHD4-207ENST00000537634 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.13
CHD4-207ENST00000537634 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
CHD4-207ENST00000537634 USP21Q9UK80 565 aa14.25□□□□□ -0.13
CHD4-207ENST00000537634 DLC1Q96QB1 1528 aa14.24□□□□□ -0.13
CHD4-207ENST00000537634 RGPD8O14715 1765 aaPredicted RBP14.24□□□□□ -0.13
CHD4-207ENST00000537634 TRPC5Q9UL62 973 aaPredicted RBP14.23□□□□□ -0.13
CHD4-207ENST00000537634 SAFB2Q14151 953 aaKnown RBP eCLIP14.22□□□□□ -0.13
CHD4-207ENST00000537634 FNBP4Q8N3X1 1017 aaPredicted RBP14.22□□□□□ -0.13
CHD4-207ENST00000537634 PRAM1Q96QH2 718 aa14.22□□□□□ -0.13
CHD4-207ENST00000537634 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
CHD4-207ENST00000537634 POGKQ9P215 609 aa14.21□□□□□ -0.13
CHD4-207ENST00000537634 ATRNO75882 1429 aa14.21□□□□□ -0.13
CHD4-207ENST00000537634 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
CHD4-207ENST00000537634 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
CHD4-207ENST00000537634 KRT28Q7Z3Y7 464 aa14.2□□□□□ -0.14
CHD4-207ENST00000537634 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
CHD4-207ENST00000537634 TNS3Q68CZ2 1445 aa14.19□□□□□ -0.14
CHD4-207ENST00000537634 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
CHD4-207ENST00000537634 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
CHD4-207ENST00000537634 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
CHD4-207ENST00000537634 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.18□□□□□ -0.14
CHD4-207ENST00000537634 ANKARQ7Z5J8 1434 aa14.18□□□□□ -0.14
CHD4-207ENST00000537634 HRCP23327 699 aa14.18□□□□□ -0.14
CHD4-207ENST00000537634 PSME1Q06323 249 aa14.18□□□□□ -0.14
CHD4-207ENST00000537634 ATAD2Q6PL18 1390 aa14.18□□□□□ -0.14
CHD4-207ENST00000537634 BCL9LQ86UU0 1499 aa14.18□□□□□ -0.14
CHD4-207ENST00000537634 HAP1P54257 671 aaPredicted RBP14.17□□□□□ -0.14
CHD4-207ENST00000537634 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
CHD4-207ENST00000537634 TRAK1Q9UPV9 953 aa14.17□□□□□ -0.14
CHD4-207ENST00000537634 EIF3AQ14152 1382 aaKnown RBP14.16□□□□□ -0.14
CHD4-207ENST00000537634 ABCA3Q99758 1704 aa14.15□□□□□ -0.14
CHD4-207ENST00000537634 SBNO1A3KN83 1393 aa14.15□□□□□ -0.14
CHD4-207ENST00000537634 ARHGEF10O15013 1369 aa14.15□□□□□ -0.14
CHD4-207ENST00000537634 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
CHD4-207ENST00000537634 MINK1Q8N4C8 1332 aaPredicted RBP14.15□□□□□ -0.15
CHD4-207ENST00000537634 LMOD2Q6P5Q4 547 aa14.14□□□□□ -0.15
CHD4-207ENST00000537634 ARHGEF28Q8N1W1 1705 aaKnown RBP14.14□□□□□ -0.15
CHD4-207ENST00000537634 SLIT2O94813 1529 aa14.14□□□□□ -0.15
CHD4-207ENST00000537634 TULP4Q9NRJ4 1543 aa14.14□□□□□ -0.15
CHD4-207ENST00000537634 PLCH1Q4KWH8 1693 aa14.14□□□□□ -0.15
CHD4-207ENST00000537634 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
CHD4-207ENST00000537634 UNC5CLQ8IV45 518 aa14.13□□□□□ -0.15
CHD4-207ENST00000537634 PMFBP1Q8TBY8 1022 aa14.13□□□□□ -0.15
CHD4-207ENST00000537634 GJD4Q96KN9 370 aaPredicted RBP14.13□□□□□ -0.15
CHD4-207ENST00000537634 TRPM3Q9HCF6 1732 aaPredicted RBP14.12□□□□□ -0.15
CHD4-207ENST00000537634 NWD2Q9ULI1 1742 aa14.12□□□□□ -0.15
CHD4-207ENST00000537634 GPRASP1Q5JY77 1395 aa14.11□□□□□ -0.15
CHD4-207ENST00000537634 GLI3P10071 1580 aa14.11□□□□□ -0.15
CHD4-207ENST00000537634 ITSN1Q15811 1721 aa14.11□□□□□ -0.15
CHD4-207ENST00000537634 CABLES1Q8TDN4 633 aa14.11□□□□□ -0.15
CHD4-207ENST00000537634 RALGAPBQ86X10 1494 aa14.11□□□□□ -0.15
CHD4-207ENST00000537634 WASLO00401 505 aaPredicted RBP14.1□□□□□ -0.15
CHD4-207ENST00000537634 ALS2Q96Q42 1657 aa14.1□□□□□ -0.15
CHD4-207ENST00000537634 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
CHD4-207ENST00000537634 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
CHD4-207ENST00000537634 ATP7BP35670 1465 aa14.07□□□□□ -0.16
CHD4-207ENST00000537634 NGDNQ8NEJ9 315 aaKnown RBP14.07□□□□□ -0.16
CHD4-207ENST00000537634 VPS72Q15906 364 aa14.06□□□□□ -0.16
CHD4-207ENST00000537634 CCDC9Q9Y3X0 531 aaKnown RBP14.06□□□□□ -0.16
CHD4-207ENST00000537634 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
CHD4-207ENST00000537634 NRAPQ86VF7 1730 aa14.05□□□□□ -0.16
CHD4-207ENST00000537634 COL14A1Q05707 1796 aaKnown RBP14.05□□□□□ -0.16
CHD4-207ENST00000537634 CRYBG1Q9Y4K1 1723 aa14.04□□□□□ -0.16
CHD4-207ENST00000537634 PAK3O75914 559 aaPredicted RBP14.04□□□□□ -0.16
CHD4-207ENST00000537634 CCDC125Q86Z20 511 aa14.04□□□□□ -0.16
CHD4-207ENST00000537634 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
CHD4-207ENST00000537634 TOPAZ1Q8N9V7 1692 aa14.04□□□□□ -0.16
CHD4-207ENST00000537634 FAM83GA6ND36 823 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms