RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 WDR43Q15061 677 aaKnown RBP eCLIP12.38□□□□□ -0.43
UBE3B-207ENST00000537063 FBXO31Q5XUX0 539 aaPredicted RBP12.38□□□□□ -0.43
UBE3B-207ENST00000537063 CDCA7LQ96GN5 454 aa12.38□□□□□ -0.43
UBE3B-207ENST00000537063 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
UBE3B-207ENST00000537063 KNDC1Q76NI1 1749 aa12.38□□□□□ -0.43
UBE3B-207ENST00000537063 RBM19Q9Y4C8 960 aaKnown RBP12.37□□□□□ -0.43
UBE3B-207ENST00000537063 MED14O60244 1454 aa12.37□□□□□ -0.43
UBE3B-207ENST00000537063 SLC12A5Q9H2X9 1139 aa12.36□□□□□ -0.43
UBE3B-207ENST00000537063 IQSEC2Q5JU85 1478 aa12.36□□□□□ -0.43
UBE3B-207ENST00000537063 NUTM2DQ5VT03 806 aaPredicted RBP12.36□□□□□ -0.43
UBE3B-207ENST00000537063 CD163L1Q9NR16 1453 aa12.36□□□□□ -0.43
UBE3B-207ENST00000537063 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
UBE3B-207ENST00000537063 ABCC11Q96J66 1382 aa12.35□□□□□ -0.43
UBE3B-207ENST00000537063 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
UBE3B-207ENST00000537063 TRMT2AQ8IZ69 625 aaKnown RBP12.35□□□□□ -0.43
UBE3B-207ENST00000537063 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
UBE3B-207ENST00000537063 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
UBE3B-207ENST00000537063 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
UBE3B-207ENST00000537063 UBR1Q8IWV7 1749 aa12.34□□□□□ -0.43
UBE3B-207ENST00000537063 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
UBE3B-207ENST00000537063 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.43
UBE3B-207ENST00000537063 DUSP27Q5VZP5 1158 aa12.33□□□□□ -0.44
UBE3B-207ENST00000537063 ADGRB2O60241 1585 aa12.33□□□□□ -0.44
UBE3B-207ENST00000537063 A0A1W2PP64 1363 aa12.32□□□□□ -0.44
UBE3B-207ENST00000537063 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
UBE3B-207ENST00000537063 CPS1P31327 1500 aa12.31□□□□□ -0.44
UBE3B-207ENST00000537063 MORC1Q86VD1 984 aa12.31□□□□□ -0.44
UBE3B-207ENST00000537063 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 SLFN5Q08AF3 891 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 ZMYM3Q14202 1370 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 TECPR2O15040 1411 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 CCDC136Q96JN2 1154 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 CABP2Q9NPB3 220 aa12.3□□□□□ -0.44
UBE3B-207ENST00000537063 ATP7BP35670 1465 aa12.29□□□□□ -0.44
UBE3B-207ENST00000537063 PRAM1Q96QH2 718 aa12.29□□□□□ -0.44
UBE3B-207ENST00000537063 NKTRP30414 1462 aaKnown RBP12.29□□□□□ -0.44
UBE3B-207ENST00000537063 NCBP3Q53F19 620 aaKnown RBP12.29□□□□□ -0.44
UBE3B-207ENST00000537063 EXOC6Q8TAG9 804 aa12.29□□□□□ -0.44
UBE3B-207ENST00000537063 FANCIQ9NVI1 1328 aa12.28□□□□□ -0.44
UBE3B-207ENST00000537063 CCDC146Q8IYE0 955 aa12.28□□□□□ -0.44
UBE3B-207ENST00000537063 CDC42BPGQ6DT37 1551 aa12.27□□□□□ -0.44
UBE3B-207ENST00000537063 PHF23Q9BUL5 403 aaPredicted RBP12.27□□□□□ -0.44
UBE3B-207ENST00000537063 APAF1O14727 1248 aa12.27□□□□□ -0.45
UBE3B-207ENST00000537063 STK26Q9P289 416 aa12.27□□□□□ -0.45
UBE3B-207ENST00000537063 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
UBE3B-207ENST00000537063 MON2Q7Z3U7 1717 aa12.26□□□□□ -0.45
UBE3B-207ENST00000537063 TNRQ92752 1358 aa12.26□□□□□ -0.45
UBE3B-207ENST00000537063 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBE3B-207ENST00000537063 AKAP12Q02952 1782 aa12.25□□□□□ -0.45
UBE3B-207ENST00000537063 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
UBE3B-207ENST00000537063 E9PSI1 815 aa12.25□□□□□ -0.45
UBE3B-207ENST00000537063 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
UBE3B-207ENST00000537063 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
UBE3B-207ENST00000537063 SPINK5Q9NQ38 1064 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-207ENST00000537063 MTHFSP49914 203 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 SAFB2Q14151 953 aaKnown RBP eCLIP12.24□□□□□ -0.45
UBE3B-207ENST00000537063 SIRT1Q96EB6 747 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 TERF2IPQ9NYB0 399 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 RUNDC1Q96C34 613 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 POGKQ9P215 609 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 C3P01024 1663 aa12.24□□□□□ -0.45
UBE3B-207ENST00000537063 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
UBE3B-207ENST00000537063 METP08581 1390 aa12.23□□□□□ -0.45
UBE3B-207ENST00000537063 CCDC27Q2M243 656 aa12.23□□□□□ -0.45
UBE3B-207ENST00000537063 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
UBE3B-207ENST00000537063 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
UBE3B-207ENST00000537063 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
UBE3B-207ENST00000537063 PNPLA6Q8IY17 1366 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 TMEM2Q9UHN6 1383 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 MLECQ14165 292 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 WWC1Q8IX03 1113 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 PLIN1O60240 522 aa12.22□□□□□ -0.45
UBE3B-207ENST00000537063 FYB1O15117 783 aa12.21□□□□□ -0.45
UBE3B-207ENST00000537063 CRBNQ96SW2 442 aa12.21□□□□□ -0.45
UBE3B-207ENST00000537063 ADAMTS13Q76LX8 1427 aa12.21□□□□□ -0.45
UBE3B-207ENST00000537063 SLIT1O75093 1534 aa12.21□□□□□ -0.46
UBE3B-207ENST00000537063 NRKQ7Z2Y5 1582 aa12.21□□□□□ -0.46
UBE3B-207ENST00000537063 FER1L4A9Z1Z3 1794 aa12.21□□□□□ -0.46
UBE3B-207ENST00000537063 TNNT2P45379 298 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-207ENST00000537063 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
UBE3B-207ENST00000537063 C20orf194Q5TEA3 1177 aa12.19□□□□□ -0.46
UBE3B-207ENST00000537063 EDC4Q6P2E9 1401 aaKnown RBP12.19□□□□□ -0.46
UBE3B-207ENST00000537063 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-207ENST00000537063 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
UBE3B-207ENST00000537063 PLEKHG1Q9ULL1 1385 aa12.19□□□□□ -0.46
UBE3B-207ENST00000537063 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-207ENST00000537063 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
UBE3B-207ENST00000537063 TCP11L2Q8N4U5 519 aa12.18□□□□□ -0.46
UBE3B-207ENST00000537063 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-207ENST00000537063 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
UBE3B-207ENST00000537063 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
UBE3B-207ENST00000537063 WAPLQ7Z5K2 1190 aa12.18□□□□□ -0.46
UBE3B-207ENST00000537063 GGNBP2Q9H3C7 697 aa12.17□□□□□ -0.46
UBE3B-207ENST00000537063 CABP1Q9NZU7 370 aa12.17□□□□□ -0.46
UBE3B-207ENST00000537063 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
UBE3B-207ENST00000537063 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
UBE3B-207ENST00000537063 PPIP5K1Q6PFW1 1433 aa12.17□□□□□ -0.46
UBE3B-207ENST00000537063 DIP2AQ14689 1571 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms