RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 SRCAPQ6ZRS2 3230 aa26.69■■□□□ 1.86
LTBR-206ENST00000536876 KNDC1Q76NI1 1749 aa26.68■■□□□ 1.86
LTBR-206ENST00000536876 ATRNO75882 1429 aa26.67■■□□□ 1.86
LTBR-206ENST00000536876 VGFO15240 615 aaPredicted RBP26.65■■□□□ 1.86
LTBR-206ENST00000536876 NGLY1Q96IV0 654 aa26.63■■□□□ 1.85
LTBR-206ENST00000536876 RPGRIP1LQ68CZ1 1315 aa26.63■■□□□ 1.85
LTBR-206ENST00000536876 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.62■■□□□ 1.85
LTBR-206ENST00000536876 FMN2Q9NZ56 1722 aa26.62■■□□□ 1.85
LTBR-206ENST00000536876 TECPR2O15040 1411 aa26.61■■□□□ 1.85
LTBR-206ENST00000536876 FNBP4Q8N3X1 1017 aaPredicted RBP26.6■■□□□ 1.85
LTBR-206ENST00000536876 BCL9LQ86UU0 1499 aa26.6■■□□□ 1.85
LTBR-206ENST00000536876 USP21Q9UK80 565 aa26.59■■□□□ 1.85
LTBR-206ENST00000536876 ATAD2Q6PL18 1390 aa26.58■■□□□ 1.85
LTBR-206ENST00000536876 SPATA31E1Q6ZUB1 1445 aa26.58■■□□□ 1.85
LTBR-206ENST00000536876 ADGRF5Q8IZF2 1346 aa26.56■■□□□ 1.84
LTBR-206ENST00000536876 SLC4A1APQ9BWU0 796 aaKnown RBP26.55■■□□□ 1.84
LTBR-206ENST00000536876 TRPC5Q9UL62 973 aaPredicted RBP26.55■■□□□ 1.84
LTBR-206ENST00000536876 KIF1AQ12756 1690 aa26.54■■□□□ 1.84
LTBR-206ENST00000536876 RGPD8O14715 1765 aaPredicted RBP26.54■■□□□ 1.84
LTBR-206ENST00000536876 PLEKHH1Q9ULM0 1364 aa26.54■■□□□ 1.84
LTBR-206ENST00000536876 GLI3P10071 1580 aa26.54■■□□□ 1.84
LTBR-206ENST00000536876 FOXD1Q16676 465 aa26.53■■□□□ 1.84
LTBR-206ENST00000536876 NPHP3Q7Z494 1330 aa26.53■■□□□ 1.84
LTBR-206ENST00000536876 ABCA3Q99758 1704 aa26.52■■□□□ 1.84
LTBR-206ENST00000536876 USP32Q8NFA0 1604 aa26.51■■□□□ 1.83
LTBR-206ENST00000536876 PIK3C2GO75747 1445 aa26.51■■□□□ 1.83
LTBR-206ENST00000536876 LRPPRCP42704 1394 aaKnown RBP26.51■■□□□ 1.83
LTBR-206ENST00000536876 XPCQ01831 940 aaPredicted RBP26.51■■□□□ 1.83
LTBR-206ENST00000536876 BRWD3Q6RI45 1802 aa26.51■■□□□ 1.83
LTBR-206ENST00000536876 ESCO1Q5FWF5 840 aa26.5■■□□□ 1.83
LTBR-206ENST00000536876 CCDC144AA2RUR9 1427 aa26.48■■□□□ 1.83
LTBR-206ENST00000536876 WAPLQ7Z5K2 1190 aa26.47■■□□□ 1.83
LTBR-206ENST00000536876 SLIT2O94813 1529 aa26.47■■□□□ 1.83
LTBR-206ENST00000536876 FOXO3O43524 673 aa26.46■■□□□ 1.83
LTBR-206ENST00000536876 PLCH1Q4KWH8 1693 aa26.46■■□□□ 1.83
LTBR-206ENST00000536876 ABCC11Q96J66 1382 aa26.46■■□□□ 1.83
LTBR-206ENST00000536876 RALGAPBQ86X10 1494 aa26.43■■□□□ 1.82
LTBR-206ENST00000536876 YTHDC2Q9H6S0 1430 aaKnown RBP26.43■■□□□ 1.82
LTBR-206ENST00000536876 NUTM2FA1L443 756 aa26.43■■□□□ 1.82
LTBR-206ENST00000536876 STK26Q9P289 416 aa26.43■■□□□ 1.82
LTBR-206ENST00000536876 ANKRD30BQ9BXX2 1392 aa26.43■■□□□ 1.82
LTBR-206ENST00000536876 TMEM132EQ6IEE7 984 aa26.41■■□□□ 1.82
LTBR-206ENST00000536876 NRXN1Q9ULB1 1477 aa26.4■■□□□ 1.82
LTBR-206ENST00000536876 SPATA31A3Q5VYP0 1347 aa26.39■■□□□ 1.82
LTBR-206ENST00000536876 NWD2Q9ULI1 1742 aa26.39■■□□□ 1.82
LTBR-206ENST00000536876 RGL3Q3MIN7 710 aa26.39■■□□□ 1.82
LTBR-206ENST00000536876 GJD4Q96KN9 370 aaPredicted RBP26.38■■□□□ 1.81
LTBR-206ENST00000536876 TNS3Q68CZ2 1445 aa26.36■■□□□ 1.81
LTBR-206ENST00000536876 NRAPQ86VF7 1730 aa26.35■■□□□ 1.81
LTBR-206ENST00000536876 TRPM3Q9HCF6 1732 aaPredicted RBP26.34■■□□□ 1.81
LTBR-206ENST00000536876 ADGRB2O60241 1585 aa26.33■■□□□ 1.8
LTBR-206ENST00000536876 UNC5CLQ8IV45 518 aa26.32■■□□□ 1.8
LTBR-206ENST00000536876 MPHOSPH9Q99550 1183 aa26.32■■□□□ 1.8
LTBR-206ENST00000536876 BLMP54132 1417 aaPredicted RBP26.3■■□□□ 1.8
LTBR-206ENST00000536876 CRYBG1Q9Y4K1 1723 aa26.29■■□□□ 1.8
LTBR-206ENST00000536876 ALS2Q96Q42 1657 aa26.28■■□□□ 1.8
LTBR-206ENST00000536876 KRT28Q7Z3Y7 464 aa26.28■■□□□ 1.8
LTBR-206ENST00000536876 CCDC125Q86Z20 511 aa26.28■■□□□ 1.8
LTBR-206ENST00000536876 ZRANB1Q9UGI0 708 aa26.28■■□□□ 1.8
LTBR-206ENST00000536876 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
LTBR-206ENST00000536876 ADGRB1O14514 1584 aa26.27■■□□□ 1.8
LTBR-206ENST00000536876 SIRT1Q96EB6 747 aa26.26■■□□□ 1.79
LTBR-206ENST00000536876 C14orf93Q9H972 538 aaKnown RBP26.26■■□□□ 1.79
LTBR-206ENST00000536876 SBNO1A3KN83 1393 aa26.25■■□□□ 1.79
LTBR-206ENST00000536876 CABLES1Q8TDN4 633 aa26.24■■□□□ 1.79
LTBR-206ENST00000536876 PHF8Q9UPP1 1060 aa26.24■■□□□ 1.79
LTBR-206ENST00000536876 LRP5O75197 1615 aa26.22■■□□□ 1.79
LTBR-206ENST00000536876 CFAP70Q5T0N1 1121 aa26.22■■□□□ 1.79
LTBR-206ENST00000536876 ANKARQ7Z5J8 1434 aa26.21■■□□□ 1.79
LTBR-206ENST00000536876 VPS72Q15906 364 aa26.2■■□□□ 1.78
LTBR-206ENST00000536876 DEFB132Q7Z7B7 95 aa26.2■■□□□ 1.78
LTBR-206ENST00000536876 SEPT12Q8IYM1 358 aa26.19■■□□□ 1.78
LTBR-206ENST00000536876 PRAM1Q96QH2 718 aa26.18■■□□□ 1.78
LTBR-206ENST00000536876 ARHGEF10O15013 1369 aa26.18■■□□□ 1.78
LTBR-206ENST00000536876 DHX57Q6P158 1386 aaKnown RBP26.18■■□□□ 1.78
LTBR-206ENST00000536876 COL14A1Q05707 1796 aaKnown RBP26.18■■□□□ 1.78
LTBR-206ENST00000536876 ONECUT3O60422 494 aaPredicted RBP26.16■■□□□ 1.78
LTBR-206ENST00000536876 SAFB2Q14151 953 aaKnown RBP eCLIP26.16■■□□□ 1.78
LTBR-206ENST00000536876 THSD7AQ9UPZ6 1657 aa26.15■■□□□ 1.78
LTBR-206ENST00000536876 PLEKHG5O94827 1062 aa26.14■■□□□ 1.78
LTBR-206ENST00000536876 TNS1Q9HBL0 1735 aaKnown RBP26.14■■□□□ 1.77
LTBR-206ENST00000536876 TULP4Q9NRJ4 1543 aa26.14■■□□□ 1.77
LTBR-206ENST00000536876 PSME1Q06323 249 aa26.13■■□□□ 1.77
LTBR-206ENST00000536876 RGPD1P0DJD0 1748 aa26.12■■□□□ 1.77
LTBR-206ENST00000536876 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
LTBR-206ENST00000536876 PRR36Q9H6K5 1346 aa26.12■■□□□ 1.77
LTBR-206ENST00000536876 FAM83GA6ND36 823 aa26.11■■□□□ 1.77
LTBR-206ENST00000536876 HAP1P54257 671 aaPredicted RBP26.11■■□□□ 1.77
LTBR-206ENST00000536876 PMFBP1Q8TBY8 1022 aa26.11■■□□□ 1.77
LTBR-206ENST00000536876 PHRF1Q9P1Y6 1649 aaKnown RBP26.09■■□□□ 1.77
LTBR-206ENST00000536876 ITSN1Q15811 1721 aa26.08■■□□□ 1.77
LTBR-206ENST00000536876 LMOD2Q6P5Q4 547 aa26.08■■□□□ 1.77
LTBR-206ENST00000536876 KRT27Q7Z3Y8 459 aa26.08■■□□□ 1.77
LTBR-206ENST00000536876 HIRIP3Q9BW71 556 aaPredicted RBP26.05■■□□□ 1.76
LTBR-206ENST00000536876 CCDC9Q9Y3X0 531 aaKnown RBP26.05■■□□□ 1.76
LTBR-206ENST00000536876 TOPAZ1Q8N9V7 1692 aa26.04■■□□□ 1.76
LTBR-206ENST00000536876 RAB3GAP2Q9H2M9 1393 aa26.04■■□□□ 1.76
LTBR-206ENST00000536876 POGKQ9P215 609 aa26.03■■□□□ 1.76
LTBR-206ENST00000536876 ACIN1Q9UKV3 1341 aaKnown RBP26.03■■□□□ 1.76
LTBR-206ENST00000536876 ATP7BP35670 1465 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms