RNA–Protein interactions for RNA: ENST00000536797.5

LPCAT3-204, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 2

Gene LPCAT3, Length 1,412 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-204ENST00000536797 TRPM1Q7Z4N2 1603 aa30.1■■■□□ 2.41
LPCAT3-204ENST00000536797 PRAM1Q96QH2 718 aa30.09■■■□□ 2.41
LPCAT3-204ENST00000536797 NBPF1Q3BBV0 1214 aa30.08■■■□□ 2.41
LPCAT3-204ENST00000536797 POGKQ9P215 609 aa30.07■■■□□ 2.4
LPCAT3-204ENST00000536797 CDC42BPGQ6DT37 1551 aa30.07■■■□□ 2.4
LPCAT3-204ENST00000536797 MST1RQ04912 1400 aa30.06■■■□□ 2.4
LPCAT3-204ENST00000536797 ARHGEF28Q8N1W1 1705 aaKnown RBP30.06■■■□□ 2.4
LPCAT3-204ENST00000536797 HSPA1LP34931 641 aa30.04■■■□□ 2.4
LPCAT3-204ENST00000536797 SAFB2Q14151 953 aaKnown RBP eCLIP30.04■■■□□ 2.4
LPCAT3-204ENST00000536797 NBPF8Q3BBV2 869 aa30.02■■■□□ 2.4
LPCAT3-204ENST00000536797 ROCK2O75116 1388 aaKnown RBP30.01■■■□□ 2.39
LPCAT3-204ENST00000536797 C1orf167Q5SNV9 1468 aa29.98■■■□□ 2.39
LPCAT3-204ENST00000536797 TIMELESSQ9UNS1 1208 aa29.97■■■□□ 2.39
LPCAT3-204ENST00000536797 ADGRB2O60241 1585 aa29.96■■■□□ 2.39
LPCAT3-204ENST00000536797 BRINP3Q76B58 766 aa29.96■■■□□ 2.39
LPCAT3-204ENST00000536797 FMN2Q9NZ56 1722 aa29.95■■■□□ 2.39
LPCAT3-204ENST00000536797 RALGAPBQ86X10 1494 aa29.94■■■□□ 2.38
LPCAT3-204ENST00000536797 MINK1Q8N4C8 1332 aaPredicted RBP29.93■■■□□ 2.38
LPCAT3-204ENST00000536797 PHLPP1O60346 1717 aa29.93■■■□□ 2.38
LPCAT3-204ENST00000536797 GPRASP1Q5JY77 1395 aa29.91■■■□□ 2.38
LPCAT3-204ENST00000536797 HIRIP3Q9BW71 556 aaPredicted RBP29.9■■■□□ 2.38
LPCAT3-204ENST00000536797 AHDC1Q5TGY3 1603 aaPredicted RBP29.9■■■□□ 2.38
LPCAT3-204ENST00000536797 NUTM2FA1L443 756 aa29.89■■■□□ 2.38
LPCAT3-204ENST00000536797 CENPJQ9HC77 1338 aaPredicted RBP29.88■■■□□ 2.37
LPCAT3-204ENST00000536797 ORAI2Q96SN7 254 aa29.88■■■□□ 2.37
LPCAT3-204ENST00000536797 CARD11Q9BXL7 1154 aa29.87■■■□□ 2.37
LPCAT3-204ENST00000536797 NHSL1Q5SYE7 1610 aa29.86■■■□□ 2.37
LPCAT3-204ENST00000536797 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
LPCAT3-204ENST00000536797 QRICH2Q9H0J4 1663 aa29.85■■■□□ 2.37
LPCAT3-204ENST00000536797 ESCO1Q5FWF5 840 aa29.85■■■□□ 2.37
LPCAT3-204ENST00000536797 COL16A1Q07092 1604 aaPredicted RBP29.84■■■□□ 2.37
LPCAT3-204ENST00000536797 WASLO00401 505 aaPredicted RBP29.83■■■□□ 2.37
LPCAT3-204ENST00000536797 RGPD8O14715 1765 aaPredicted RBP29.82■■■□□ 2.36
LPCAT3-204ENST00000536797 ANKARQ7Z5J8 1434 aa29.81■■■□□ 2.36
LPCAT3-204ENST00000536797 TULP4Q9NRJ4 1543 aa29.8■■■□□ 2.36
LPCAT3-204ENST00000536797 KIF1AQ12756 1690 aa29.79■■■□□ 2.36
LPCAT3-204ENST00000536797 USP32Q8NFA0 1604 aa29.79■■■□□ 2.36
LPCAT3-204ENST00000536797 DDX17Q92841 729 aaKnown RBP29.78■■■□□ 2.36
LPCAT3-204ENST00000536797 CDK19Q9BWU1 502 aa29.75■■■□□ 2.35
LPCAT3-204ENST00000536797 NPHP3Q7Z494 1330 aa29.74■■■□□ 2.35
LPCAT3-204ENST00000536797 JCADQ9P266 1359 aa29.73■■■□□ 2.35
LPCAT3-204ENST00000536797 PHF8Q9UPP1 1060 aa29.72■■■□□ 2.35
LPCAT3-204ENST00000536797 PRR36Q9H6K5 1346 aa29.72■■■□□ 2.35
LPCAT3-204ENST00000536797 FOXO3O43524 673 aa29.71■■■□□ 2.35
LPCAT3-204ENST00000536797 ITSN1Q15811 1721 aa29.71■■■□□ 2.35
LPCAT3-204ENST00000536797 ATP7BP35670 1465 aa29.71■■■□□ 2.35
LPCAT3-204ENST00000536797 SOS2Q07890 1332 aaPredicted RBP29.7■■■□□ 2.35
LPCAT3-204ENST00000536797 LRRC59Q96AG4 307 aaKnown RBP29.7■■■□□ 2.34
LPCAT3-204ENST00000536797 NUDT16Q96DE0 195 aaKnown RBP29.69■■■□□ 2.34
LPCAT3-204ENST00000536797 SHPRHQ149N8 1683 aa29.68■■■□□ 2.34
LPCAT3-204ENST00000536797 SRPK2P78362 688 aaKnown RBP29.68■■■□□ 2.34
LPCAT3-204ENST00000536797 EVC2Q86UK5 1308 aa29.67■■■□□ 2.34
LPCAT3-204ENST00000536797 SBNO2Q9Y2G9 1366 aa29.67■■■□□ 2.34
LPCAT3-204ENST00000536797 PXDNQ92626 1479 aa29.67■■■□□ 2.34
LPCAT3-204ENST00000536797 PMFBP1Q8TBY8 1022 aa29.66■■■□□ 2.34
LPCAT3-204ENST00000536797 TOPAZ1Q8N9V7 1692 aa29.65■■■□□ 2.34
LPCAT3-204ENST00000536797 MED1Q15648 1581 aaPredicted RBP29.64■■■□□ 2.34
LPCAT3-204ENST00000536797 XPCQ01831 940 aaPredicted RBP29.63■■■□□ 2.33
LPCAT3-204ENST00000536797 CABP2Q9NPB3 220 aa29.62■■■□□ 2.33
LPCAT3-204ENST00000536797 USP47Q96K76 1375 aa29.62■■■□□ 2.33
LPCAT3-204ENST00000536797 CCDC61Q9Y6R9 512 aa29.62■■■□□ 2.33
LPCAT3-204ENST00000536797 KRT28Q7Z3Y7 464 aa29.61■■■□□ 2.33
LPCAT3-204ENST00000536797 SPATA31A6Q5VVP1 1343 aa29.6■■■□□ 2.33
LPCAT3-204ENST00000536797 PSME1Q06323 249 aa29.6■■■□□ 2.33
LPCAT3-204ENST00000536797 ST20-MTHFSA0A0A6YYL1 179 aa29.59■■■□□ 2.33
LPCAT3-204ENST00000536797 NGDNQ8NEJ9 315 aaKnown RBP29.59■■■□□ 2.33
LPCAT3-204ENST00000536797 PNPLA6Q8IY17 1366 aa29.59■■■□□ 2.33
LPCAT3-204ENST00000536797 PPIP5K1Q6PFW1 1433 aa29.56■■■□□ 2.32
LPCAT3-204ENST00000536797 PLEKHG3A1L390 1219 aa29.54■■■□□ 2.32
LPCAT3-204ENST00000536797 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
LPCAT3-204ENST00000536797 TESK2Q96S53 571 aa29.53■■■□□ 2.32
LPCAT3-204ENST00000536797 SPATA31A3Q5VYP0 1347 aa29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 SBNO1A3KN83 1393 aa29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 POLR3AO14802 1390 aaPredicted RBP29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 ATAD2Q6PL18 1390 aa29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 DISP3Q9P2K9 1392 aa29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 TNS3Q68CZ2 1445 aa29.52■■■□□ 2.32
LPCAT3-204ENST00000536797 COL22A1Q8NFW1 1626 aaPredicted RBP29.51■■■□□ 2.32
LPCAT3-204ENST00000536797 ACEP12821 1306 aa29.51■■■□□ 2.31
LPCAT3-204ENST00000536797 TRPM3Q9HCF6 1732 aaPredicted RBP29.5■■■□□ 2.31
LPCAT3-204ENST00000536797 LRP6O75581 1613 aa29.49■■■□□ 2.31
LPCAT3-204ENST00000536797 NUTM2BA6NNL0 878 aaPredicted RBP29.49■■■□□ 2.31
LPCAT3-204ENST00000536797 NUTM2EB1AL46 878 aaPredicted RBP29.49■■■□□ 2.31
LPCAT3-204ENST00000536797 NUTM2AQ8IVF1 878 aaPredicted RBP29.49■■■□□ 2.31
LPCAT3-204ENST00000536797 CABP1Q9NZU7 370 aa29.48■■■□□ 2.31
LPCAT3-204ENST00000536797 PHF23Q9BUL5 403 aaPredicted RBP29.46■■■□□ 2.31
LPCAT3-204ENST00000536797 MEX3CQ5U5Q3 659 aaKnown RBP29.45■■■□□ 2.31
LPCAT3-204ENST00000536797 ARHGEF10O15013 1369 aa29.45■■■□□ 2.31
LPCAT3-204ENST00000536797 LMOD2Q6P5Q4 547 aa29.45■■■□□ 2.3
LPCAT3-204ENST00000536797 TMF1P82094 1093 aa29.44■■■□□ 2.3
LPCAT3-204ENST00000536797 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
LPCAT3-204ENST00000536797 ALS2Q96Q42 1657 aa29.43■■■□□ 2.3
LPCAT3-204ENST00000536797 PAK3O75914 559 aaPredicted RBP29.43■■■□□ 2.3
LPCAT3-204ENST00000536797 EIF4G2P78344 907 aaKnown RBP eCLIP29.43■■■□□ 2.3
LPCAT3-204ENST00000536797 AKAP12Q02952 1782 aa29.38■■■□□ 2.29
LPCAT3-204ENST00000536797 TMC1Q8TDI8 760 aa29.37■■■□□ 2.29
LPCAT3-204ENST00000536797 USP6P35125 1406 aa29.37■■■□□ 2.29
LPCAT3-204ENST00000536797 BRD4O60885 1362 aaPredicted RBP29.37■■■□□ 2.29
LPCAT3-204ENST00000536797 HSPA5P11021 654 aaKnown RBP29.36■■■□□ 2.29
LPCAT3-204ENST00000536797 CDCA8Q53HL2 280 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms