RNA–Protein interactions for RNA: ENST00000536625.1

KNTC1-209, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 1,178 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-209ENST00000536625 SNRPBP14678 240 aaKnown RBP10.09□□□□□ -0.79
KNTC1-209ENST00000536625 GCGRP47871 477 aa10.09□□□□□ -0.79
KNTC1-209ENST00000536625 RNF19BQ6ZMZ0 732 aa10.09□□□□□ -0.79
KNTC1-209ENST00000536625 PHOX2BQ99453 314 aa10.09□□□□□ -0.79
KNTC1-209ENST00000536625 GPR37O15354 613 aa10.08□□□□□ -0.8
KNTC1-209ENST00000536625 ATP13A2Q9NQ11 1180 aa10.08□□□□□ -0.8
KNTC1-209ENST00000536625 STK17AQ9UEE5 414 aa10.08□□□□□ -0.8
KNTC1-209ENST00000536625 WNT7AO00755 349 aa10.07□□□□□ -0.8
KNTC1-209ENST00000536625 SALL2Q9Y467 1007 aaPredicted RBP10.07□□□□□ -0.8
KNTC1-209ENST00000536625 J3QL48 77 aa10.06□□□□□ -0.8
KNTC1-209ENST00000536625 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
KNTC1-209ENST00000536625 GNPATO15228 680 aa10.05□□□□□ -0.8
KNTC1-209ENST00000536625 SNIP1Q8TAD8 396 aaKnown RBP10.05□□□□□ -0.8
KNTC1-209ENST00000536625 ZBTB24O43167 697 aaPredicted RBP10.04□□□□□ -0.8
KNTC1-209ENST00000536625 MRGPRX2Q96LB1 330 aa10.04□□□□□ -0.8
KNTC1-209ENST00000536625 TRIM32Q13049 653 aa10.03□□□□□ -0.8
KNTC1-209ENST00000536625 TESPA1A2RU30 521 aaPredicted RBP10.02□□□□□ -0.81
KNTC1-209ENST00000536625 TERTO14746 1132 aaKnown RBP10.02□□□□□ -0.81
KNTC1-209ENST00000536625 INSM1Q01101 510 aaPredicted RBP10.02□□□□□ -0.81
KNTC1-209ENST00000536625 HPS1Q92902 700 aa10.02□□□□□ -0.81
KNTC1-209ENST00000536625 TRIM47Q96LD4 638 aa10.02□□□□□ -0.81
KNTC1-209ENST00000536625 MMP16P51512 607 aa10□□□□□ -0.81
KNTC1-209ENST00000536625 SULF1Q8IWU6 871 aa9.99□□□□□ -0.81
KNTC1-209ENST00000536625 SKOR1P84550 965 aa9.96□□□□□ -0.82
KNTC1-209ENST00000536625 SENP2Q9HC62 589 aa9.96□□□□□ -0.82
KNTC1-209ENST00000536625 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
KNTC1-209ENST00000536625 GRIPAP1Q4V328 841 aa9.93□□□□□ -0.82
KNTC1-209ENST00000536625 RC3H1Q5TC82 1133 aaKnown RBP9.93□□□□□ -0.82
KNTC1-209ENST00000536625 HLA-CQ95604 372 aa9.93□□□□□ -0.82
KNTC1-209ENST00000536625 Q3C1V9 767 aa9.92□□□□□ -0.82
KNTC1-209ENST00000536625 USB1Q9BQ65 265 aaKnown RBP9.92□□□□□ -0.82
KNTC1-209ENST00000536625 CD46P15529 392 aa9.91□□□□□ -0.82
KNTC1-209ENST00000536625 REPIN1Q9BWE0 567 aaKnown RBP9.91□□□□□ -0.82
KNTC1-209ENST00000536625 LORP23490 312 aaPredicted RBP9.9□□□□□ -0.82
KNTC1-209ENST00000536625 CCDC24Q8N4L8 307 aa9.9□□□□□ -0.82
KNTC1-209ENST00000536625 KIFC2Q96AC6 838 aa9.9□□□□□ -0.82
KNTC1-209ENST00000536625 SMYD5Q6GMV2 418 aa9.89□□□□□ -0.83
KNTC1-209ENST00000536625 KDM4AO75164 1064 aa9.87□□□□□ -0.83
KNTC1-209ENST00000536625 ALDH1A1P00352 501 aa9.87□□□□□ -0.83
KNTC1-209ENST00000536625 GMPRP36959 345 aa9.87□□□□□ -0.83
KNTC1-209ENST00000536625 BMP1P13497 986 aa9.86□□□□□ -0.83
KNTC1-209ENST00000536625 WNT7BP56706 349 aa9.86□□□□□ -0.83
KNTC1-209ENST00000536625 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
KNTC1-209ENST00000536625 TRIM46Q7Z4K8 759 aa9.86□□□□□ -0.83
KNTC1-209ENST00000536625 NXF1Q9UBU9 619 aaKnown RBP9.85□□□□□ -0.83
KNTC1-209ENST00000536625 SIAH2O43255 324 aa9.84□□□□□ -0.83
KNTC1-209ENST00000536625 VEGFBP49765 207 aa9.84□□□□□ -0.83
KNTC1-209ENST00000536625 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
KNTC1-209ENST00000536625 PTCRAQ6ISU1 281 aaPredicted RBP9.83□□□□□ -0.84
KNTC1-209ENST00000536625 GPIHBP1Q8IV16 184 aa9.83□□□□□ -0.84
KNTC1-209ENST00000536625 SYMPKQ92797 1274 aaKnown RBP9.83□□□□□ -0.84
KNTC1-209ENST00000536625 HOXA2O43364 376 aa9.82□□□□□ -0.84
KNTC1-209ENST00000536625 SLC16A10Q8TF71 515 aa9.82□□□□□ -0.84
KNTC1-209ENST00000536625 JUNDP17535 347 aa9.8□□□□□ -0.84
KNTC1-209ENST00000536625 ERBB4Q15303 1308 aa9.8□□□□□ -0.84
KNTC1-209ENST00000536625 ZSCAN1Q8NBB4 408 aa9.79□□□□□ -0.84
KNTC1-209ENST00000536625 BCANQ96GW7 911 aa9.79□□□□□ -0.84
KNTC1-209ENST00000536625 CAPN5O15484 640 aaPredicted RBP9.78□□□□□ -0.84
KNTC1-209ENST00000536625 USP46P62068 366 aa9.78□□□□□ -0.84
KNTC1-209ENST00000536625 MDM2Q00987 491 aaPredicted RBP9.78□□□□□ -0.84
KNTC1-209ENST00000536625 LOC100996750A0A140TA64 210 aa9.77□□□□□ -0.85
KNTC1-209ENST00000536625 H3BM21 787 aa9.77□□□□□ -0.85
KNTC1-209ENST00000536625 EHBP1Q8NDI1 1231 aa9.77□□□□□ -0.85
KNTC1-209ENST00000536625 IRF7Q92985 503 aa9.77□□□□□ -0.85
KNTC1-209ENST00000536625 KRTAP4-6Q9BYQ5 205 aa9.77□□□□□ -0.85
KNTC1-209ENST00000536625 MAP2K5Q13163 448 aa9.76□□□□□ -0.85
KNTC1-209ENST00000536625 NUDT12Q9BQG2 462 aa9.76□□□□□ -0.85
KNTC1-209ENST00000536625 FAM181BA6NEQ2 426 aa9.75□□□□□ -0.85
KNTC1-209ENST00000536625 NPAS3Q8IXF0 933 aa9.75□□□□□ -0.85
KNTC1-209ENST00000536625 WASF2Q9Y6W5 498 aa9.75□□□□□ -0.85
KNTC1-209ENST00000536625 SH3BP2P78314 561 aa9.74□□□□□ -0.85
KNTC1-209ENST00000536625 IRF6O14896 467 aa9.73□□□□□ -0.85
KNTC1-209ENST00000536625 ZFP42Q96MM3 310 aa9.73□□□□□ -0.85
KNTC1-209ENST00000536625 TULP1O00294 542 aaPredicted RBP9.71□□□□□ -0.86
KNTC1-209ENST00000536625 RETREG3Q86VR2 466 aa9.71□□□□□ -0.86
KNTC1-209ENST00000536625 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
KNTC1-209ENST00000536625 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
KNTC1-209ENST00000536625 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
KNTC1-209ENST00000536625 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
KNTC1-209ENST00000536625 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
KNTC1-209ENST00000536625 SOBPA7XYQ1 873 aa9.67□□□□□ -0.86
KNTC1-209ENST00000536625 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
KNTC1-209ENST00000536625 CCDC102AQ96A19 550 aa9.67□□□□□ -0.86
KNTC1-209ENST00000536625 ZMYND10O75800 440 aa9.66□□□□□ -0.86
KNTC1-209ENST00000536625 MS4A1P11836 297 aa9.66□□□□□ -0.86
KNTC1-209ENST00000536625 BAP1Q92560 729 aa9.66□□□□□ -0.86
KNTC1-209ENST00000536625 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
KNTC1-209ENST00000536625 GPCPD1Q9NPB8 672 aa9.65□□□□□ -0.86
KNTC1-209ENST00000536625 MINK1Q8N4C8 1332 aaPredicted RBP9.64□□□□□ -0.87
KNTC1-209ENST00000536625 C6orf229H3BNL8 230 aa9.64□□□□□ -0.87
KNTC1-209ENST00000536625 FDX1P10109 184 aa9.64□□□□□ -0.87
KNTC1-209ENST00000536625 NNTQ13423 1086 aa9.64□□□□□ -0.87
KNTC1-209ENST00000536625 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
KNTC1-209ENST00000536625 NUTM1Q86Y26 1132 aa9.64□□□□□ -0.87
KNTC1-209ENST00000536625 PURBQ96QR8 312 aaKnown RBP9.64□□□□□ -0.87
KNTC1-209ENST00000536625 TIMP2P16035 220 aa9.63□□□□□ -0.87
KNTC1-209ENST00000536625 BARGINQ6ZT62 677 aa9.63□□□□□ -0.87
KNTC1-209ENST00000536625 EVA1BQ9NVM1 165 aa9.63□□□□□ -0.87
KNTC1-209ENST00000536625 VSIG8P0DPA2 414 aa9.62□□□□□ -0.87
KNTC1-209ENST00000536625 PTPRNQ16849 979 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms