RNA–Protein interactions for RNA: ENST00000536569.1

MRPS35-202, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 4

Gene MRPS35, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-202ENST00000536569 KNDC1Q76NI1 1749 aa19.43■□□□□ 0.7
MRPS35-202ENST00000536569 SOS2Q07890 1332 aaPredicted RBP19.43■□□□□ 0.7
MRPS35-202ENST00000536569 PNPLA6Q8IY17 1366 aa19.42■□□□□ 0.7
MRPS35-202ENST00000536569 YTHDC2Q9H6S0 1430 aaKnown RBP19.42■□□□□ 0.7
MRPS35-202ENST00000536569 STAC3Q96MF2 364 aa19.41■□□□□ 0.7
MRPS35-202ENST00000536569 ORAI2Q96SN7 254 aa19.41■□□□□ 0.7
MRPS35-202ENST00000536569 STK26Q9P289 416 aa19.41■□□□□ 0.7
MRPS35-202ENST00000536569 TMEM132EQ6IEE7 984 aa19.4■□□□□ 0.7
MRPS35-202ENST00000536569 DDX17Q92841 729 aaKnown RBP19.4■□□□□ 0.7
MRPS35-202ENST00000536569 NUTM2BA6NNL0 878 aaPredicted RBP19.39■□□□□ 0.69
MRPS35-202ENST00000536569 NUTM2EB1AL46 878 aaPredicted RBP19.39■□□□□ 0.69
MRPS35-202ENST00000536569 NUTM2AQ8IVF1 878 aaPredicted RBP19.39■□□□□ 0.69
MRPS35-202ENST00000536569 DHX57Q6P158 1386 aaKnown RBP19.39■□□□□ 0.69
MRPS35-202ENST00000536569 NPHP3Q7Z494 1330 aa19.38■□□□□ 0.69
MRPS35-202ENST00000536569 WAPLQ7Z5K2 1190 aa19.38■□□□□ 0.69
MRPS35-202ENST00000536569 ESCO1Q5FWF5 840 aa19.36■□□□□ 0.69
MRPS35-202ENST00000536569 CFAP70Q5T0N1 1121 aa19.35■□□□□ 0.69
MRPS35-202ENST00000536569 PLEKHH1Q9ULM0 1364 aa19.34■□□□□ 0.69
MRPS35-202ENST00000536569 AFF2P51816 1311 aa19.33■□□□□ 0.69
MRPS35-202ENST00000536569 RXRBP28702 533 aa19.33■□□□□ 0.68
MRPS35-202ENST00000536569 DLC1Q96QB1 1528 aa19.32■□□□□ 0.68
MRPS35-202ENST00000536569 CDK12Q9NYV4 1490 aaPredicted RBP19.32■□□□□ 0.68
MRPS35-202ENST00000536569 PXDNQ92626 1479 aa19.31■□□□□ 0.68
MRPS35-202ENST00000536569 COL22A1Q8NFW1 1626 aaPredicted RBP19.31■□□□□ 0.68
MRPS35-202ENST00000536569 FMN2Q9NZ56 1722 aa19.31■□□□□ 0.68
MRPS35-202ENST00000536569 C8orf37Q96NL8 207 aa19.3■□□□□ 0.68
MRPS35-202ENST00000536569 FOXO3O43524 673 aa19.29■□□□□ 0.68
MRPS35-202ENST00000536569 KIF1AQ12756 1690 aa19.28■□□□□ 0.68
MRPS35-202ENST00000536569 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
MRPS35-202ENST00000536569 ADGRB1O14514 1584 aa19.27■□□□□ 0.68
MRPS35-202ENST00000536569 NGLY1Q96IV0 654 aa19.27■□□□□ 0.68
MRPS35-202ENST00000536569 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
MRPS35-202ENST00000536569 QTRT2Q9H974 415 aaKnown RBP19.26■□□□□ 0.67
MRPS35-202ENST00000536569 POGKQ9P215 609 aa19.26■□□□□ 0.67
MRPS35-202ENST00000536569 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
MRPS35-202ENST00000536569 ADAMTS2O95450 1211 aa19.25■□□□□ 0.67
MRPS35-202ENST00000536569 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
MRPS35-202ENST00000536569 FNBP4Q8N3X1 1017 aaPredicted RBP19.24■□□□□ 0.67
MRPS35-202ENST00000536569 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
MRPS35-202ENST00000536569 ANKARQ7Z5J8 1434 aa19.24■□□□□ 0.67
MRPS35-202ENST00000536569 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
MRPS35-202ENST00000536569 PHF8Q9UPP1 1060 aa19.23■□□□□ 0.67
MRPS35-202ENST00000536569 PSME1Q06323 249 aa19.22■□□□□ 0.67
MRPS35-202ENST00000536569 SPATA31A3Q5VYP0 1347 aa19.22■□□□□ 0.67
MRPS35-202ENST00000536569 EIF3AQ14152 1382 aaKnown RBP19.21■□□□□ 0.67
MRPS35-202ENST00000536569 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
MRPS35-202ENST00000536569 KRT28Q7Z3Y7 464 aa19.21■□□□□ 0.67
MRPS35-202ENST00000536569 USP21Q9UK80 565 aa19.21■□□□□ 0.67
MRPS35-202ENST00000536569 SAFB2Q14151 953 aaKnown RBP eCLIP19.2■□□□□ 0.66
MRPS35-202ENST00000536569 TRPC5Q9UL62 973 aaPredicted RBP19.2■□□□□ 0.66
MRPS35-202ENST00000536569 TRAK1Q9UPV9 953 aa19.2■□□□□ 0.66
MRPS35-202ENST00000536569 SBNO1A3KN83 1393 aa19.19■□□□□ 0.66
MRPS35-202ENST00000536569 UPF1Q92900 1129 aaKnown RBP eCLIP19.17■□□□□ 0.66
MRPS35-202ENST00000536569 MARF1Q9Y4F3 1742 aaKnown RBP19.17■□□□□ 0.66
MRPS35-202ENST00000536569 TNS3Q68CZ2 1445 aa19.17■□□□□ 0.66
MRPS35-202ENST00000536569 RGPD8O14715 1765 aaPredicted RBP19.16■□□□□ 0.66
MRPS35-202ENST00000536569 RGS12O14924 1447 aa19.16■□□□□ 0.66
MRPS35-202ENST00000536569 ATRNO75882 1429 aa19.16■□□□□ 0.66
MRPS35-202ENST00000536569 ARHGEF10O15013 1369 aa19.15■□□□□ 0.66
MRPS35-202ENST00000536569 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
MRPS35-202ENST00000536569 BCL9LQ86UU0 1499 aa19.14■□□□□ 0.65
MRPS35-202ENST00000536569 TULP4Q9NRJ4 1543 aa19.14■□□□□ 0.65
MRPS35-202ENST00000536569 USP32Q8NFA0 1604 aa19.14■□□□□ 0.65
MRPS35-202ENST00000536569 KIAA1210Q9ULL0 1709 aa19.14■□□□□ 0.65
MRPS35-202ENST00000536569 MINK1Q8N4C8 1332 aaPredicted RBP19.13■□□□□ 0.65
MRPS35-202ENST00000536569 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
MRPS35-202ENST00000536569 SLIT2O94813 1529 aa19.1■□□□□ 0.65
MRPS35-202ENST00000536569 GPRASP1Q5JY77 1395 aa19.1■□□□□ 0.65
MRPS35-202ENST00000536569 PMFBP1Q8TBY8 1022 aa19.1■□□□□ 0.65
MRPS35-202ENST00000536569 ARHGEF28Q8N1W1 1705 aaKnown RBP19.1■□□□□ 0.65
MRPS35-202ENST00000536569 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.1■□□□□ 0.65
MRPS35-202ENST00000536569 UNC5CLQ8IV45 518 aa19.09■□□□□ 0.65
MRPS35-202ENST00000536569 PRR36Q9H6K5 1346 aa19.08■□□□□ 0.65
MRPS35-202ENST00000536569 HAP1P54257 671 aaPredicted RBP19.08■□□□□ 0.64
MRPS35-202ENST00000536569 GJD4Q96KN9 370 aaPredicted RBP19.07■□□□□ 0.64
MRPS35-202ENST00000536569 ATAD2Q6PL18 1390 aa19.06■□□□□ 0.64
MRPS35-202ENST00000536569 LMOD2Q6P5Q4 547 aa19.05■□□□□ 0.64
MRPS35-202ENST00000536569 NGDNQ8NEJ9 315 aaKnown RBP19.05■□□□□ 0.64
MRPS35-202ENST00000536569 TRPM3Q9HCF6 1732 aaPredicted RBP19.05■□□□□ 0.64
MRPS35-202ENST00000536569 ITSN1Q15811 1721 aa19.04■□□□□ 0.64
MRPS35-202ENST00000536569 NUDT16Q96DE0 195 aaKnown RBP19.04■□□□□ 0.64
MRPS35-202ENST00000536569 ATP7BP35670 1465 aa19.03■□□□□ 0.64
MRPS35-202ENST00000536569 CABLES1Q8TDN4 633 aa19.03■□□□□ 0.64
MRPS35-202ENST00000536569 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
MRPS35-202ENST00000536569 ALS2Q96Q42 1657 aa19.02■□□□□ 0.64
MRPS35-202ENST00000536569 CDK19Q9BWU1 502 aa19.02■□□□□ 0.64
MRPS35-202ENST00000536569 ABCA3Q99758 1704 aa19.02■□□□□ 0.63
MRPS35-202ENST00000536569 VPS72Q15906 364 aa19.01■□□□□ 0.63
MRPS35-202ENST00000536569 NBPF1Q3BBV0 1214 aa19.01■□□□□ 0.63
MRPS35-202ENST00000536569 CCDC61Q9Y6R9 512 aa19.01■□□□□ 0.63
MRPS35-202ENST00000536569 RALGAPBQ86X10 1494 aa19.01■□□□□ 0.63
MRPS35-202ENST00000536569 POLR3AO14802 1390 aaPredicted RBP18.99■□□□□ 0.63
MRPS35-202ENST00000536569 PLEKHG3A1L390 1219 aa18.99■□□□□ 0.63
MRPS35-202ENST00000536569 CCDC125Q86Z20 511 aa18.99■□□□□ 0.63
MRPS35-202ENST00000536569 L3MBTL2Q969R5 705 aa18.99■□□□□ 0.63
MRPS35-202ENST00000536569 FAM83GA6ND36 823 aa18.98■□□□□ 0.63
MRPS35-202ENST00000536569 CENPJQ9HC77 1338 aaPredicted RBP18.98■□□□□ 0.63
MRPS35-202ENST00000536569 GLI3P10071 1580 aa18.98■□□□□ 0.63
MRPS35-202ENST00000536569 ONECUT3O60422 494 aaPredicted RBP18.97■□□□□ 0.63
MRPS35-202ENST00000536569 PLCH1Q4KWH8 1693 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms