RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 QRICH2Q9H0J4 1663 aa28.34■■■□□ 2.13
TRIM3-214ENST00000536344 PRAM1Q96QH2 718 aa28.34■■■□□ 2.13
TRIM3-214ENST00000536344 NEFMP07197 916 aa28.34■■■□□ 2.13
TRIM3-214ENST00000536344 TNNT2P45379 298 aaPredicted RBP28.33■■■□□ 2.13
TRIM3-214ENST00000536344 A2ML1A8K2U0 1454 aa28.32■■■□□ 2.12
TRIM3-214ENST00000536344 ASXL1Q8IXJ9 1541 aa28.31■■■□□ 2.12
TRIM3-214ENST00000536344 POGKQ9P215 609 aa28.31■■■□□ 2.12
TRIM3-214ENST00000536344 PPP2R1AP30153 589 aa28.3■■■□□ 2.12
TRIM3-214ENST00000536344 SPATA31D1Q6ZQQ2 1576 aa28.29■■■□□ 2.12
TRIM3-214ENST00000536344 RIMS2Q9UQ26 1411 aa28.29■■■□□ 2.12
TRIM3-214ENST00000536344 SRPK2P78362 688 aaKnown RBP28.28■■■□□ 2.12
TRIM3-214ENST00000536344 WAPLQ7Z5K2 1190 aa28.28■■■□□ 2.12
TRIM3-214ENST00000536344 MYO3AQ8NEV4 1616 aa28.26■■■□□ 2.12
TRIM3-214ENST00000536344 BRPF3Q9ULD4 1205 aa28.26■■■□□ 2.11
TRIM3-214ENST00000536344 ARHGEF28Q8N1W1 1705 aaKnown RBP28.26■■■□□ 2.11
TRIM3-214ENST00000536344 ZFYVE9O95405 1425 aa28.25■■■□□ 2.11
TRIM3-214ENST00000536344 SBNO2Q9Y2G9 1366 aa28.24■■■□□ 2.11
TRIM3-214ENST00000536344 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
TRIM3-214ENST00000536344 EVC2Q86UK5 1308 aa28.24■■■□□ 2.11
TRIM3-214ENST00000536344 UBE2Q2Q8WVN8 375 aa28.24■■■□□ 2.11
TRIM3-214ENST00000536344 YTHDC2Q9H6S0 1430 aaKnown RBP28.24■■■□□ 2.11
TRIM3-214ENST00000536344 TNRQ92752 1358 aa28.24■■■□□ 2.11
TRIM3-214ENST00000536344 ALKQ9UM73 1620 aa28.22■■■□□ 2.11
TRIM3-214ENST00000536344 SLC24A1O60721 1099 aa28.22■■■□□ 2.11
TRIM3-214ENST00000536344 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.11
TRIM3-214ENST00000536344 ADAMTS8Q9UP79 889 aa28.2■■■□□ 2.11
TRIM3-214ENST00000536344 NSD3Q9BZ95 1437 aa28.2■■■□□ 2.11
TRIM3-214ENST00000536344 PLEKHH1Q9ULM0 1364 aa28.18■■■□□ 2.1
TRIM3-214ENST00000536344 NUDCQ9Y266 331 aa28.18■■■□□ 2.1
TRIM3-214ENST00000536344 TXNDC2Q86VQ3 553 aa28.17■■■□□ 2.1
TRIM3-214ENST00000536344 SMG6Q86US8 1419 aaKnown RBP28.17■■■□□ 2.1
TRIM3-214ENST00000536344 EIF5BO60841 1220 aaKnown RBP28.17■■■□□ 2.1
TRIM3-214ENST00000536344 PTPRMP28827 1452 aa28.16■■■□□ 2.1
TRIM3-214ENST00000536344 METP08581 1390 aa28.15■■■□□ 2.1
TRIM3-214ENST00000536344 RNF123Q5XPI4 1314 aa28.14■■■□□ 2.1
TRIM3-214ENST00000536344 LTKP29376 864 aa28.12■■■□□ 2.09
TRIM3-214ENST00000536344 CCDC146Q8IYE0 955 aa28.12■■■□□ 2.09
TRIM3-214ENST00000536344 CDK19Q9BWU1 502 aa28.12■■■□□ 2.09
TRIM3-214ENST00000536344 WDR43Q15061 677 aaKnown RBP eCLIP28.12■■■□□ 2.09
TRIM3-214ENST00000536344 MORC1Q86VD1 984 aa28.12■■■□□ 2.09
TRIM3-214ENST00000536344 CDCA7LQ96GN5 454 aa28.11■■■□□ 2.09
TRIM3-214ENST00000536344 SLC26A8Q96RN1 970 aa28.11■■■□□ 2.09
TRIM3-214ENST00000536344 PDE4AP27815 886 aa28.07■■■□□ 2.08
TRIM3-214ENST00000536344 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.06■■■□□ 2.08
TRIM3-214ENST00000536344 CABP1Q9NZU7 370 aa28.06■■■□□ 2.08
TRIM3-214ENST00000536344 TMEM2Q9UHN6 1383 aa28.06■■■□□ 2.08
TRIM3-214ENST00000536344 NCKAP5LQ9HCH0 1330 aa28.05■■■□□ 2.08
TRIM3-214ENST00000536344 GGNBP2Q9H3C7 697 aa28.05■■■□□ 2.08
TRIM3-214ENST00000536344 USP35Q9P2H5 1018 aa28.05■■■□□ 2.08
TRIM3-214ENST00000536344 A0A1W2PP64 1363 aa28.04■■■□□ 2.08
TRIM3-214ENST00000536344 NUTM2FA1L443 756 aa28.04■■■□□ 2.08
TRIM3-214ENST00000536344 SKAP1Q86WV1 359 aa28.04■■■□□ 2.08
TRIM3-214ENST00000536344 EXOC6Q8TAG9 804 aa28.02■■■□□ 2.08
TRIM3-214ENST00000536344 NRXN3Q9Y4C0 1643 aa28.02■■■□□ 2.08
TRIM3-214ENST00000536344 CGNL1Q0VF96 1302 aa28.02■■■□□ 2.08
TRIM3-214ENST00000536344 NPC1L1Q9UHC9 1359 aa28.01■■■□□ 2.08
TRIM3-214ENST00000536344 UBR1Q8IWV7 1749 aa28.01■■■□□ 2.07
TRIM3-214ENST00000536344 ANKRD36BQ8N2N9 1353 aa28■■■□□ 2.07
TRIM3-214ENST00000536344 HDGFP51858 240 aaKnown RBP27.99■■■□□ 2.07
TRIM3-214ENST00000536344 C3P01024 1663 aa27.99■■■□□ 2.07
TRIM3-214ENST00000536344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.99■■■□□ 2.07
TRIM3-214ENST00000536344 FER1L4A9Z1Z3 1794 aa27.98■■■□□ 2.07
TRIM3-214ENST00000536344 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
TRIM3-214ENST00000536344 BACH2Q9BYV9 841 aa27.98■■■□□ 2.07
TRIM3-214ENST00000536344 MTHFSP49914 203 aa27.97■■■□□ 2.07
TRIM3-214ENST00000536344 FBLN1P23142 703 aa27.97■■■□□ 2.07
TRIM3-214ENST00000536344 DNAJC5Q9H3Z4 198 aa27.97■■■□□ 2.07
TRIM3-214ENST00000536344 SLC4A3P48751 1232 aa27.96■■■□□ 2.07
TRIM3-214ENST00000536344 GSE1Q14687 1217 aa27.96■■■□□ 2.07
TRIM3-214ENST00000536344 BLMP54132 1417 aaPredicted RBP27.94■■■□□ 2.06
TRIM3-214ENST00000536344 PPM1GO15355 546 aaPredicted RBP27.94■■■□□ 2.06
TRIM3-214ENST00000536344 ABCC11Q96J66 1382 aa27.94■■■□□ 2.06
TRIM3-214ENST00000536344 APAF1O14727 1248 aa27.92■■■□□ 2.06
TRIM3-214ENST00000536344 FRAT1Q92837 279 aaPredicted RBP27.92■■■□□ 2.06
TRIM3-214ENST00000536344 EID1Q9Y6B2 187 aa27.92■■■□□ 2.06
TRIM3-214ENST00000536344 TERF2IPQ9NYB0 399 aa27.92■■■□□ 2.06
TRIM3-214ENST00000536344 ATAD2Q6PL18 1390 aa27.91■■■□□ 2.06
TRIM3-214ENST00000536344 TCERG1O14776 1098 aaKnown RBP27.91■■■□□ 2.06
TRIM3-214ENST00000536344 ROBO2Q9HCK4 1378 aa27.9■■■□□ 2.06
TRIM3-214ENST00000536344 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
TRIM3-214ENST00000536344 FYB1O15117 783 aa27.9■■■□□ 2.06
TRIM3-214ENST00000536344 NEUROD2Q15784 382 aa27.9■■■□□ 2.06
TRIM3-214ENST00000536344 ADAMTS13Q76LX8 1427 aa27.89■■■□□ 2.06
TRIM3-214ENST00000536344 WASLO00401 505 aaPredicted RBP27.89■■■□□ 2.06
TRIM3-214ENST00000536344 NFKBIBQ15653 356 aa27.89■■■□□ 2.05
TRIM3-214ENST00000536344 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
TRIM3-214ENST00000536344 HDGFL2Q7Z4V5 671 aaPredicted RBP27.88■■■□□ 2.05
TRIM3-214ENST00000536344 NLRP1Q9C000 1473 aa27.87■■■□□ 2.05
TRIM3-214ENST00000536344 RRP7AQ9Y3A4 280 aaKnown RBP27.86■■■□□ 2.05
TRIM3-214ENST00000536344 RRP1P56182 461 aaKnown RBP27.85■■■□□ 2.05
TRIM3-214ENST00000536344 NUDT16Q96DE0 195 aaKnown RBP27.84■■■□□ 2.05
TRIM3-214ENST00000536344 ZRANB1Q9UGI0 708 aa27.84■■■□□ 2.05
TRIM3-214ENST00000536344 THEMISQ8N1K5 641 aaPredicted RBP27.83■■■□□ 2.05
TRIM3-214ENST00000536344 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
TRIM3-214ENST00000536344 RBM33Q96EV2 1170 aaKnown RBP27.82■■■□□ 2.04
TRIM3-214ENST00000536344 DLC1Q96QB1 1528 aa27.81■■■□□ 2.04
TRIM3-214ENST00000536344 PLEKHG1Q9ULL1 1385 aa27.81■■■□□ 2.04
TRIM3-214ENST00000536344 RIMS1Q86UR5 1692 aaKnown RBP27.81■■■□□ 2.04
TRIM3-214ENST00000536344 RCAN3Q9UKA8 241 aa27.81■■■□□ 2.04
TRIM3-214ENST00000536344 PTPRUQ92729 1446 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms