RNA–Protein interactions for RNA: ENST00000535664.5

MSRB3-206, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-206ENST00000535664 KNDC1Q76NI1 1749 aa20.67■□□□□ 0.9
MSRB3-206ENST00000535664 JCADQ9P266 1359 aa20.67■□□□□ 0.9
MSRB3-206ENST00000535664 NALCNQ8IZF0 1738 aa20.66■□□□□ 0.9
MSRB3-206ENST00000535664 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
MSRB3-206ENST00000535664 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
MSRB3-206ENST00000535664 ASXL1Q8IXJ9 1541 aa20.64■□□□□ 0.9
MSRB3-206ENST00000535664 C1orf167Q5SNV9 1468 aa20.64■□□□□ 0.89
MSRB3-206ENST00000535664 POGKQ9P215 609 aa20.64■□□□□ 0.89
MSRB3-206ENST00000535664 PHLPP1O60346 1717 aa20.64■□□□□ 0.89
MSRB3-206ENST00000535664 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
MSRB3-206ENST00000535664 LRRC59Q96AG4 307 aaKnown RBP20.63■□□□□ 0.89
MSRB3-206ENST00000535664 KIAA1210Q9ULL0 1709 aa20.63■□□□□ 0.89
MSRB3-206ENST00000535664 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
MSRB3-206ENST00000535664 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
MSRB3-206ENST00000535664 SPATA31A6Q5VVP1 1343 aa20.61■□□□□ 0.89
MSRB3-206ENST00000535664 MED1Q15648 1581 aaPredicted RBP20.61■□□□□ 0.89
MSRB3-206ENST00000535664 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
MSRB3-206ENST00000535664 GPRASP1Q5JY77 1395 aa20.59■□□□□ 0.89
MSRB3-206ENST00000535664 ADGRB1O14514 1584 aa20.59■□□□□ 0.89
MSRB3-206ENST00000535664 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
MSRB3-206ENST00000535664 COL16A1Q07092 1604 aaPredicted RBP20.57■□□□□ 0.88
MSRB3-206ENST00000535664 ESCO1Q5FWF5 840 aa20.57■□□□□ 0.88
MSRB3-206ENST00000535664 EIF3AQ14152 1382 aaKnown RBP20.57■□□□□ 0.88
MSRB3-206ENST00000535664 PLEKHH1Q9ULM0 1364 aa20.57■□□□□ 0.88
MSRB3-206ENST00000535664 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
MSRB3-206ENST00000535664 ORAI2Q96SN7 254 aa20.55■□□□□ 0.88
MSRB3-206ENST00000535664 NHSL1Q5SYE7 1610 aa20.54■□□□□ 0.88
MSRB3-206ENST00000535664 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
MSRB3-206ENST00000535664 ROCK2O75116 1388 aaKnown RBP20.52■□□□□ 0.88
MSRB3-206ENST00000535664 NBPF1Q3BBV0 1214 aa20.52■□□□□ 0.88
MSRB3-206ENST00000535664 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
MSRB3-206ENST00000535664 ANKARQ7Z5J8 1434 aa20.5■□□□□ 0.87
MSRB3-206ENST00000535664 SHPRHQ149N8 1683 aa20.49■□□□□ 0.87
MSRB3-206ENST00000535664 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 ADGRB2O60241 1585 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 WASLO00401 505 aaPredicted RBP20.47■□□□□ 0.87
MSRB3-206ENST00000535664 FOXO3O43524 673 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 PSME1Q06323 249 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 MEX3CQ5U5Q3 659 aaKnown RBP20.47■□□□□ 0.87
MSRB3-206ENST00000535664 CARD11Q9BXL7 1154 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 PHF8Q9UPP1 1060 aa20.47■□□□□ 0.87
MSRB3-206ENST00000535664 USP47Q96K76 1375 aa20.46■□□□□ 0.87
MSRB3-206ENST00000535664 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
MSRB3-206ENST00000535664 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
MSRB3-206ENST00000535664 KIF1AQ12756 1690 aa20.45■□□□□ 0.86
MSRB3-206ENST00000535664 HSPA5P11021 654 aaKnown RBP20.45■□□□□ 0.86
MSRB3-206ENST00000535664 DDX17Q92841 729 aaKnown RBP20.45■□□□□ 0.86
MSRB3-206ENST00000535664 EIF4G2P78344 907 aaKnown RBP eCLIP20.44■□□□□ 0.86
MSRB3-206ENST00000535664 PNPLA6Q8IY17 1366 aa20.44■□□□□ 0.86
MSRB3-206ENST00000535664 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
MSRB3-206ENST00000535664 ZNF772Q68DY9 489 aaPredicted RBP20.42■□□□□ 0.86
MSRB3-206ENST00000535664 ILDR2Q71H61 639 aa20.42■□□□□ 0.86
MSRB3-206ENST00000535664 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
MSRB3-206ENST00000535664 KRT28Q7Z3Y7 464 aa20.41■□□□□ 0.86
MSRB3-206ENST00000535664 CENPJQ9HC77 1338 aaPredicted RBP20.41■□□□□ 0.86
MSRB3-206ENST00000535664 NUTM2BA6NNL0 878 aaPredicted RBP20.4■□□□□ 0.86
MSRB3-206ENST00000535664 NUTM2EB1AL46 878 aaPredicted RBP20.4■□□□□ 0.86
MSRB3-206ENST00000535664 NUTM2AQ8IVF1 878 aaPredicted RBP20.4■□□□□ 0.86
MSRB3-206ENST00000535664 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
MSRB3-206ENST00000535664 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.85
MSRB3-206ENST00000535664 PXDNQ92626 1479 aa20.39■□□□□ 0.85
MSRB3-206ENST00000535664 SOCS7O14512 581 aa20.38■□□□□ 0.85
MSRB3-206ENST00000535664 RGS17Q9UGC6 210 aaPredicted RBP20.38■□□□□ 0.85
MSRB3-206ENST00000535664 SBNO1A3KN83 1393 aa20.37■□□□□ 0.85
MSRB3-206ENST00000535664 SPATA31A3Q5VYP0 1347 aa20.37■□□□□ 0.85
MSRB3-206ENST00000535664 CDK19Q9BWU1 502 aa20.37■□□□□ 0.85
MSRB3-206ENST00000535664 NUDT16Q96DE0 195 aaKnown RBP20.36■□□□□ 0.85
MSRB3-206ENST00000535664 CCDC61Q9Y6R9 512 aa20.36■□□□□ 0.85
MSRB3-206ENST00000535664 LRP6O75581 1613 aa20.35■□□□□ 0.85
MSRB3-206ENST00000535664 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
MSRB3-206ENST00000535664 NGDNQ8NEJ9 315 aaKnown RBP20.34■□□□□ 0.85
MSRB3-206ENST00000535664 COL22A1Q8NFW1 1626 aaPredicted RBP20.34■□□□□ 0.85
MSRB3-206ENST00000535664 ST20-MTHFSA0A0A6YYL1 179 aa20.33■□□□□ 0.85
MSRB3-206ENST00000535664 SLC24A1O60721 1099 aa20.33■□□□□ 0.85
MSRB3-206ENST00000535664 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.85
MSRB3-206ENST00000535664 PMFBP1Q8TBY8 1022 aa20.33■□□□□ 0.85
MSRB3-206ENST00000535664 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
MSRB3-206ENST00000535664 PRR36Q9H6K5 1346 aa20.31■□□□□ 0.84
MSRB3-206ENST00000535664 SRPK2P78362 688 aaKnown RBP20.31■□□□□ 0.84
MSRB3-206ENST00000535664 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
MSRB3-206ENST00000535664 TESK2Q96S53 571 aa20.31■□□□□ 0.84
MSRB3-206ENST00000535664 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
MSRB3-206ENST00000535664 TNS3Q68CZ2 1445 aa20.3■□□□□ 0.84
MSRB3-206ENST00000535664 PLEKHG3A1L390 1219 aa20.3■□□□□ 0.84
MSRB3-206ENST00000535664 POTEAQ6S8J7 498 aa20.3■□□□□ 0.84
MSRB3-206ENST00000535664 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
MSRB3-206ENST00000535664 RGPD8O14715 1765 aaPredicted RBP20.3■□□□□ 0.84
MSRB3-206ENST00000535664 ADAMTS2O95450 1211 aa20.29■□□□□ 0.84
MSRB3-206ENST00000535664 ITSN1Q15811 1721 aa20.29■□□□□ 0.84
MSRB3-206ENST00000535664 QRICH2Q9H0J4 1663 aa20.29■□□□□ 0.84
MSRB3-206ENST00000535664 AFF2P51816 1311 aa20.28■□□□□ 0.84
MSRB3-206ENST00000535664 SBNO2Q9Y2G9 1366 aa20.28■□□□□ 0.84
MSRB3-206ENST00000535664 ATP7BP35670 1465 aa20.28■□□□□ 0.84
MSRB3-206ENST00000535664 C11orf95C9JLR9 678 aaPredicted RBP20.27■□□□□ 0.84
MSRB3-206ENST00000535664 HAP1P54257 671 aaPredicted RBP20.27■□□□□ 0.84
MSRB3-206ENST00000535664 POLR3AO14802 1390 aaPredicted RBP20.26■□□□□ 0.83
MSRB3-206ENST00000535664 BRD4O60885 1362 aaPredicted RBP20.26■□□□□ 0.83
MSRB3-206ENST00000535664 LMOD2Q6P5Q4 547 aa20.26■□□□□ 0.83
MSRB3-206ENST00000535664 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
MSRB3-206ENST00000535664 RXRBP28702 533 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms