RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 TRIM67Q6ZTA4 783 aa14.05□□□□□ -0.16
LMO3-212ENST00000535535 PDZRN3Q9UPQ7 1066 aa14.05□□□□□ -0.16
LMO3-212ENST00000535535 WDR62O43379 1518 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 GPCPD1Q9NPB8 672 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 MROH2BQ7Z745 1585 aa14.04□□□□□ -0.16
LMO3-212ENST00000535535 BRICD5Q6PL45 260 aa14.03□□□□□ -0.16
LMO3-212ENST00000535535 FAM160A2Q8N612 972 aaPredicted RBP14.03□□□□□ -0.16
LMO3-212ENST00000535535 CLCN1P35523 988 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 GRIPAP1Q4V328 841 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 RNF19BQ6ZMZ0 732 aa14.02□□□□□ -0.16
LMO3-212ENST00000535535 MRC2Q9UBG0 1479 aa14.02□□□□□ -0.17
LMO3-212ENST00000535535 KDM4AO75164 1064 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 ZMYND10O75800 440 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 BARGINQ6ZT62 677 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 PRDM9Q9NQV7 894 aa14.01□□□□□ -0.17
LMO3-212ENST00000535535 FAM217BQ9NTX9 383 aaPredicted RBP14.01□□□□□ -0.17
LMO3-212ENST00000535535 ZNF598Q86UK7 904 aaKnown RBP14□□□□□ -0.17
LMO3-212ENST00000535535 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
LMO3-212ENST00000535535 MSS51Q4VC12 460 aa13.99□□□□□ -0.17
LMO3-212ENST00000535535 MYT1Q01538 1121 aa13.98□□□□□ -0.17
LMO3-212ENST00000535535 CADPSQ9ULU8 1353 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 USP46P62068 366 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 ZNF697Q5TEC3 545 aa13.97□□□□□ -0.17
LMO3-212ENST00000535535 REPIN1Q9BWE0 567 aaKnown RBP13.97□□□□□ -0.17
LMO3-212ENST00000535535 FCF1Q9Y324 198 aaKnown RBP13.97□□□□□ -0.17
LMO3-212ENST00000535535 Q3C1V9 767 aa13.96□□□□□ -0.17
LMO3-212ENST00000535535 HLA-CQ95604 372 aa13.96□□□□□ -0.17
LMO3-212ENST00000535535 HOXA2O43364 376 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20EP86478 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20CP86479 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20DP86480 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20BP86481 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 PRR20AP86496 221 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 TRAF7Q6Q0C0 670 aa13.95□□□□□ -0.18
LMO3-212ENST00000535535 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
LMO3-212ENST00000535535 GDF9O60383 454 aa13.92□□□□□ -0.18
LMO3-212ENST00000535535 AMHR2Q16671 573 aa13.92□□□□□ -0.18
LMO3-212ENST00000535535 RPIAP49247 311 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 CEP164Q9UPV0 1460 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 WIZO95785 1651 aa13.9□□□□□ -0.18
LMO3-212ENST00000535535 MMP16P51512 607 aa13.89□□□□□ -0.19
LMO3-212ENST00000535535 GUCA2AQ02747 115 aa13.88□□□□□ -0.19
LMO3-212ENST00000535535 USB1Q9BQ65 265 aaKnown RBP13.88□□□□□ -0.19
LMO3-212ENST00000535535 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
LMO3-212ENST00000535535 PKD2L1Q9P0L9 805 aa13.87□□□□□ -0.19
LMO3-212ENST00000535535 DXOO77932 396 aaKnown RBP13.86□□□□□ -0.19
LMO3-212ENST00000535535 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
LMO3-212ENST00000535535 SSTR3P32745 418 aaPredicted RBP13.85□□□□□ -0.19
LMO3-212ENST00000535535 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
LMO3-212ENST00000535535 NUTM1Q86Y26 1132 aa13.84□□□□□ -0.19
LMO3-212ENST00000535535 GIGYF2Q6Y7W6 1299 aaKnown RBP13.83□□□□□ -0.2
LMO3-212ENST00000535535 DGAT1O75907 488 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 CD2BP2O95400 341 aaKnown RBP13.8□□□□□ -0.2
LMO3-212ENST00000535535 PKDCCQ504Y2 493 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 SPIRE2Q8WWL2 714 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 SYMPKQ92797 1274 aaKnown RBP13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3CA6NJZ7 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3BA6NNM3 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 RIMBP3Q9UFD9 1639 aa13.8□□□□□ -0.2
LMO3-212ENST00000535535 FOXC1Q12948 553 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PARP9Q8IXQ6 854 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PCDHGC3Q9UN70 934 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 CFTRP13569 1480 aa13.79□□□□□ -0.2
LMO3-212ENST00000535535 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
LMO3-212ENST00000535535 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.2
LMO3-212ENST00000535535 FAM187AA6NFU0 413 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 TRIM66O15016 1216 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 FDX1P10109 184 aa13.77□□□□□ -0.21
LMO3-212ENST00000535535 URB2Q14146 1524 aaKnown RBP13.77□□□□□ -0.21
LMO3-212ENST00000535535 JUNDP17535 347 aa13.76□□□□□ -0.21
LMO3-212ENST00000535535 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
LMO3-212ENST00000535535 ZBTB24O43167 697 aaPredicted RBP13.75□□□□□ -0.21
LMO3-212ENST00000535535 TRIM32Q13049 653 aa13.75□□□□□ -0.21
LMO3-212ENST00000535535 AK7Q96M32 723 aa13.75□□□□□ -0.21
LMO3-212ENST00000535535 MOXD2PA6NHM9 499 aa13.74□□□□□ -0.21
LMO3-212ENST00000535535 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
LMO3-212ENST00000535535 BEGAINQ9BUH8 593 aa13.73□□□□□ -0.21
LMO3-212ENST00000535535 NDUFV2P19404 249 aa13.72□□□□□ -0.21
LMO3-212ENST00000535535 MS4A1P11836 297 aa13.71□□□□□ -0.21
LMO3-212ENST00000535535 C6orf229H3BNL8 230 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 WNT7AO00755 349 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 ARHGEF11O15085 1522 aa13.69□□□□□ -0.22
LMO3-212ENST00000535535 TOP2AP11388 1531 aaKnown RBP13.68□□□□□ -0.22
LMO3-212ENST00000535535 TBC1D2Q9BYX2 928 aa13.67□□□□□ -0.22
LMO3-212ENST00000535535 CYP4X1Q8N118 509 aa13.67□□□□□ -0.22
LMO3-212ENST00000535535 NUDT12Q9BQG2 462 aa13.66□□□□□ -0.22
LMO3-212ENST00000535535 ST8SIA5O15466 376 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 GJA5P36382 358 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
LMO3-212ENST00000535535 RSBN1LQ6PCB5 846 aaPredicted RBP13.64□□□□□ -0.23
LMO3-212ENST00000535535 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
LMO3-212ENST00000535535 AVPP01185 164 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 SKOR1P84550 965 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 PDE4DQ08499 809 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 AAASQ9NRG9 546 aa13.63□□□□□ -0.23
LMO3-212ENST00000535535 MTMR2Q13614 643 aa13.62□□□□□ -0.23
LMO3-212ENST00000535535 DIXDC1Q155Q3 683 aa13.62□□□□□ -0.23
LMO3-212ENST00000535535 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms