RNA–Protein interactions for RNA: ENST00000535462.5

PTPN6-206, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-206ENST00000535462 KNDC1Q76NI1 1749 aa23.64■■□□□ 1.38
PTPN6-206ENST00000535462 IFT172Q9UG01 1749 aa23.64■■□□□ 1.38
PTPN6-206ENST00000535462 NPHP3Q7Z494 1330 aa23.64■■□□□ 1.38
PTPN6-206ENST00000535462 RGS12O14924 1447 aa23.64■■□□□ 1.37
PTPN6-206ENST00000535462 ORAI2Q96SN7 254 aa23.63■■□□□ 1.37
PTPN6-206ENST00000535462 LRPPRCP42704 1394 aaKnown RBP23.63■■□□□ 1.37
PTPN6-206ENST00000535462 SPATA31E1Q6ZUB1 1445 aa23.62■■□□□ 1.37
PTPN6-206ENST00000535462 ABCC11Q96J66 1382 aa23.6■■□□□ 1.37
PTPN6-206ENST00000535462 FNBP4Q8N3X1 1017 aaPredicted RBP23.59■■□□□ 1.37
PTPN6-206ENST00000535462 MYOM2P54296 1465 aa23.58■■□□□ 1.37
PTPN6-206ENST00000535462 TRPC5Q9UL62 973 aaPredicted RBP23.58■■□□□ 1.37
PTPN6-206ENST00000535462 ADAMTS2O95450 1211 aa23.57■■□□□ 1.36
PTPN6-206ENST00000535462 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
PTPN6-206ENST00000535462 PXDNQ92626 1479 aa23.56■■□□□ 1.36
PTPN6-206ENST00000535462 MARF1Q9Y4F3 1742 aaKnown RBP23.56■■□□□ 1.36
PTPN6-206ENST00000535462 USP21Q9UK80 565 aa23.56■■□□□ 1.36
PTPN6-206ENST00000535462 ADGRF5Q8IZF2 1346 aa23.56■■□□□ 1.36
PTPN6-206ENST00000535462 ATAD2Q6PL18 1390 aa23.55■■□□□ 1.36
PTPN6-206ENST00000535462 KIF1AQ12756 1690 aa23.55■■□□□ 1.36
PTPN6-206ENST00000535462 ESCO1Q5FWF5 840 aa23.55■■□□□ 1.36
PTPN6-206ENST00000535462 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
PTPN6-206ENST00000535462 ATRNO75882 1429 aa23.53■■□□□ 1.36
PTPN6-206ENST00000535462 SIRT1Q96EB6 747 aa23.53■■□□□ 1.36
PTPN6-206ENST00000535462 FMN2Q9NZ56 1722 aa23.53■■□□□ 1.36
PTPN6-206ENST00000535462 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
PTPN6-206ENST00000535462 FOXD1Q16676 465 aa23.5■■□□□ 1.35
PTPN6-206ENST00000535462 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
PTPN6-206ENST00000535462 RGL3Q3MIN7 710 aa23.49■■□□□ 1.35
PTPN6-206ENST00000535462 NRXN1Q9ULB1 1477 aa23.48■■□□□ 1.35
PTPN6-206ENST00000535462 FOXO3O43524 673 aa23.47■■□□□ 1.35
PTPN6-206ENST00000535462 BCL9LQ86UU0 1499 aa23.46■■□□□ 1.35
PTPN6-206ENST00000535462 WAPLQ7Z5K2 1190 aa23.45■■□□□ 1.34
PTPN6-206ENST00000535462 STK26Q9P289 416 aa23.45■■□□□ 1.34
PTPN6-206ENST00000535462 CCDC125Q86Z20 511 aa23.44■■□□□ 1.34
PTPN6-206ENST00000535462 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
PTPN6-206ENST00000535462 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
PTPN6-206ENST00000535462 SPATA31A3Q5VYP0 1347 aa23.42■■□□□ 1.34
PTPN6-206ENST00000535462 PLEKHH1Q9ULM0 1364 aa23.41■■□□□ 1.34
PTPN6-206ENST00000535462 TMEM132EQ6IEE7 984 aa23.41■■□□□ 1.34
PTPN6-206ENST00000535462 SLIT2O94813 1529 aa23.4■■□□□ 1.34
PTPN6-206ENST00000535462 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
PTPN6-206ENST00000535462 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
PTPN6-206ENST00000535462 GJD4Q96KN9 370 aaPredicted RBP23.39■■□□□ 1.33
PTPN6-206ENST00000535462 PSME1Q06323 249 aa23.38■■□□□ 1.33
PTPN6-206ENST00000535462 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
PTPN6-206ENST00000535462 UNC5CLQ8IV45 518 aa23.37■■□□□ 1.33
PTPN6-206ENST00000535462 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
PTPN6-206ENST00000535462 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
PTPN6-206ENST00000535462 XPCQ01831 940 aaPredicted RBP23.36■■□□□ 1.33
PTPN6-206ENST00000535462 SBNO1A3KN83 1393 aa23.36■■□□□ 1.33
PTPN6-206ENST00000535462 EP400Q96L91 3159 aa23.36■■□□□ 1.33
PTPN6-206ENST00000535462 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
PTPN6-206ENST00000535462 KRT28Q7Z3Y7 464 aa23.35■■□□□ 1.33
PTPN6-206ENST00000535462 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
PTPN6-206ENST00000535462 NWD2Q9ULI1 1742 aa23.35■■□□□ 1.33
PTPN6-206ENST00000535462 ARHGEF10O15013 1369 aa23.35■■□□□ 1.33
PTPN6-206ENST00000535462 RGPD8O14715 1765 aaPredicted RBP23.35■■□□□ 1.33
PTPN6-206ENST00000535462 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
PTPN6-206ENST00000535462 EIF3AQ14152 1382 aaKnown RBP23.32■■□□□ 1.32
PTPN6-206ENST00000535462 GLI3P10071 1580 aa23.31■■□□□ 1.32
PTPN6-206ENST00000535462 RALGAPBQ86X10 1494 aa23.31■■□□□ 1.32
PTPN6-206ENST00000535462 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
PTPN6-206ENST00000535462 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
PTPN6-206ENST00000535462 PRAM1Q96QH2 718 aa23.29■■□□□ 1.32
PTPN6-206ENST00000535462 ZRANB1Q9UGI0 708 aa23.29■■□□□ 1.32
PTPN6-206ENST00000535462 ADGRB1O14514 1584 aa23.28■■□□□ 1.32
PTPN6-206ENST00000535462 HAP1P54257 671 aaPredicted RBP23.28■■□□□ 1.32
PTPN6-206ENST00000535462 PLCH1Q4KWH8 1693 aa23.28■■□□□ 1.32
PTPN6-206ENST00000535462 BLMP54132 1417 aaPredicted RBP23.27■■□□□ 1.32
PTPN6-206ENST00000535462 VPS72Q15906 364 aa23.26■■□□□ 1.31
PTPN6-206ENST00000535462 POGKQ9P215 609 aa23.26■■□□□ 1.31
PTPN6-206ENST00000535462 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
PTPN6-206ENST00000535462 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
PTPN6-206ENST00000535462 ONECUT3O60422 494 aaPredicted RBP23.22■■□□□ 1.31
PTPN6-206ENST00000535462 TULP4Q9NRJ4 1543 aa23.22■■□□□ 1.31
PTPN6-206ENST00000535462 BRWD3Q6RI45 1802 aa23.22■■□□□ 1.31
PTPN6-206ENST00000535462 SRCAPQ6ZRS2 3230 aa23.21■■□□□ 1.31
PTPN6-206ENST00000535462 ALS2Q96Q42 1657 aa23.2■■□□□ 1.3
PTPN6-206ENST00000535462 GPRASP1Q5JY77 1395 aa23.2■■□□□ 1.3
PTPN6-206ENST00000535462 HRCP23327 699 aa23.2■■□□□ 1.3
PTPN6-206ENST00000535462 SAFB2Q14151 953 aaKnown RBP eCLIP23.18■■□□□ 1.3
PTPN6-206ENST00000535462 ITSN1Q15811 1721 aa23.18■■□□□ 1.3
PTPN6-206ENST00000535462 COL14A1Q05707 1796 aaKnown RBP23.17■■□□□ 1.3
PTPN6-206ENST00000535462 NRAPQ86VF7 1730 aa23.17■■□□□ 1.3
PTPN6-206ENST00000535462 SF3B2Q13435 895 aaKnown RBP23.17■■□□□ 1.3
PTPN6-206ENST00000535462 SEPT12Q8IYM1 358 aa23.17■■□□□ 1.3
PTPN6-206ENST00000535462 LMOD2Q6P5Q4 547 aa23.16■■□□□ 1.3
PTPN6-206ENST00000535462 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
PTPN6-206ENST00000535462 CABLES1Q8TDN4 633 aa23.15■■□□□ 1.3
PTPN6-206ENST00000535462 TRAK1Q9UPV9 953 aa23.15■■□□□ 1.3
PTPN6-206ENST00000535462 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
PTPN6-206ENST00000535462 KRT27Q7Z3Y8 459 aa23.13■■□□□ 1.29
PTPN6-206ENST00000535462 ARHGEF28Q8N1W1 1705 aaKnown RBP23.13■■□□□ 1.29
PTPN6-206ENST00000535462 DCAF11Q8TEB1 546 aa23.12■■□□□ 1.29
PTPN6-206ENST00000535462 CCDC9Q9Y3X0 531 aaKnown RBP23.12■■□□□ 1.29
PTPN6-206ENST00000535462 CRYBG1Q9Y4K1 1723 aa23.12■■□□□ 1.29
PTPN6-206ENST00000535462 FAM83GA6ND36 823 aa23.11■■□□□ 1.29
PTPN6-206ENST00000535462 MINK1Q8N4C8 1332 aaPredicted RBP23.09■■□□□ 1.29
PTPN6-206ENST00000535462 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
PTPN6-206ENST00000535462 KIAA1210Q9ULL0 1709 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms