RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 ZNF772Q68DY9 489 aaPredicted RBP17.27■□□□□ 0.36
KNTC1-208ENST00000535410 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
KNTC1-208ENST00000535410 RGS17Q9UGC6 210 aaPredicted RBP17.27■□□□□ 0.36
KNTC1-208ENST00000535410 IFT172Q9UG01 1749 aa17.27■□□□□ 0.35
KNTC1-208ENST00000535410 POGKQ9P215 609 aa17.26■□□□□ 0.35
KNTC1-208ENST00000535410 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
KNTC1-208ENST00000535410 NALCNQ8IZF0 1738 aa17.25■□□□□ 0.35
KNTC1-208ENST00000535410 NUTM2BA6NNL0 878 aaPredicted RBP17.24■□□□□ 0.35
KNTC1-208ENST00000535410 NUTM2EB1AL46 878 aaPredicted RBP17.24■□□□□ 0.35
KNTC1-208ENST00000535410 NUTM2AQ8IVF1 878 aaPredicted RBP17.24■□□□□ 0.35
KNTC1-208ENST00000535410 SOS2Q07890 1332 aaPredicted RBP17.23■□□□□ 0.35
KNTC1-208ENST00000535410 LAMC1P11047 1609 aa17.23■□□□□ 0.35
KNTC1-208ENST00000535410 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
KNTC1-208ENST00000535410 DDX17Q92841 729 aaKnown RBP17.22■□□□□ 0.35
KNTC1-208ENST00000535410 PRAM1Q96QH2 718 aa17.22■□□□□ 0.35
KNTC1-208ENST00000535410 SHPRHQ149N8 1683 aa17.2■□□□□ 0.34
KNTC1-208ENST00000535410 FOXO3O43524 673 aa17.2■□□□□ 0.34
KNTC1-208ENST00000535410 POTEAQ6S8J7 498 aa17.2■□□□□ 0.34
KNTC1-208ENST00000535410 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
KNTC1-208ENST00000535410 PLEKHH1Q9ULM0 1364 aa17.19■□□□□ 0.34
KNTC1-208ENST00000535410 NHSL1Q5SYE7 1610 aa17.19■□□□□ 0.34
KNTC1-208ENST00000535410 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
KNTC1-208ENST00000535410 TRAK1Q9UPV9 953 aa17.19■□□□□ 0.34
KNTC1-208ENST00000535410 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
KNTC1-208ENST00000535410 PSME1Q06323 249 aa17.17■□□□□ 0.34
KNTC1-208ENST00000535410 SAFB2Q14151 953 aaKnown RBP eCLIP17.17■□□□□ 0.34
KNTC1-208ENST00000535410 DLC1Q96QB1 1528 aa17.16■□□□□ 0.34
KNTC1-208ENST00000535410 EIF3AQ14152 1382 aaKnown RBP17.16■□□□□ 0.34
KNTC1-208ENST00000535410 LRP6O75581 1613 aa17.15■□□□□ 0.34
KNTC1-208ENST00000535410 NGLY1Q96IV0 654 aa17.15■□□□□ 0.34
KNTC1-208ENST00000535410 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
KNTC1-208ENST00000535410 RXRBP28702 533 aa17.14■□□□□ 0.33
KNTC1-208ENST00000535410 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
KNTC1-208ENST00000535410 AFF2P51816 1311 aa17.13■□□□□ 0.33
KNTC1-208ENST00000535410 ADAMTS2O95450 1211 aa17.12■□□□□ 0.33
KNTC1-208ENST00000535410 KRT28Q7Z3Y7 464 aa17.12■□□□□ 0.33
KNTC1-208ENST00000535410 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
KNTC1-208ENST00000535410 ADGRB1O14514 1584 aa17.11■□□□□ 0.33
KNTC1-208ENST00000535410 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
KNTC1-208ENST00000535410 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
KNTC1-208ENST00000535410 MINK1Q8N4C8 1332 aaPredicted RBP17.1■□□□□ 0.33
KNTC1-208ENST00000535410 QTRT2Q9H974 415 aaKnown RBP17.09■□□□□ 0.33
KNTC1-208ENST00000535410 PXDNQ92626 1479 aa17.08■□□□□ 0.32
KNTC1-208ENST00000535410 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
KNTC1-208ENST00000535410 HIRIP3Q9BW71 556 aaPredicted RBP17.08■□□□□ 0.32
KNTC1-208ENST00000535410 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
KNTC1-208ENST00000535410 KIF1AQ12756 1690 aa17.07■□□□□ 0.32
KNTC1-208ENST00000535410 HAP1P54257 671 aaPredicted RBP17.07■□□□□ 0.32
KNTC1-208ENST00000535410 RBM6P78332 1123 aaKnown RBP17.07■□□□□ 0.32
KNTC1-208ENST00000535410 GPRASP1Q5JY77 1395 aa17.06■□□□□ 0.32
KNTC1-208ENST00000535410 TRIM26Q12899 539 aaPredicted RBP17.06■□□□□ 0.32
KNTC1-208ENST00000535410 USP21Q9UK80 565 aa17.06■□□□□ 0.32
KNTC1-208ENST00000535410 TRPC5Q9UL62 973 aaPredicted RBP17.06■□□□□ 0.32
KNTC1-208ENST00000535410 SBNO1A3KN83 1393 aa17.05■□□□□ 0.32
KNTC1-208ENST00000535410 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
KNTC1-208ENST00000535410 FNBP4Q8N3X1 1017 aaPredicted RBP17.05■□□□□ 0.32
KNTC1-208ENST00000535410 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
KNTC1-208ENST00000535410 ARHGEF10O15013 1369 aa17.04■□□□□ 0.32
KNTC1-208ENST00000535410 LMOD2Q6P5Q4 547 aa17.04■□□□□ 0.32
KNTC1-208ENST00000535410 NGDNQ8NEJ9 315 aaKnown RBP17.04■□□□□ 0.32
KNTC1-208ENST00000535410 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
KNTC1-208ENST00000535410 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
KNTC1-208ENST00000535410 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
KNTC1-208ENST00000535410 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.32
KNTC1-208ENST00000535410 SIN3AQ96ST3 1273 aa17.02■□□□□ 0.32
KNTC1-208ENST00000535410 COL22A1Q8NFW1 1626 aaPredicted RBP17.02■□□□□ 0.31
KNTC1-208ENST00000535410 NUDT16Q96DE0 195 aaKnown RBP17.01■□□□□ 0.31
KNTC1-208ENST00000535410 CDK19Q9BWU1 502 aa17.01■□□□□ 0.31
KNTC1-208ENST00000535410 TNS3Q68CZ2 1445 aa17.01■□□□□ 0.31
KNTC1-208ENST00000535410 KIAA1210Q9ULL0 1709 aa17.01■□□□□ 0.31
KNTC1-208ENST00000535410 TULP4Q9NRJ4 1543 aa17.01■□□□□ 0.31
KNTC1-208ENST00000535410 CENPJQ9HC77 1338 aaPredicted RBP16.99■□□□□ 0.31
KNTC1-208ENST00000535410 CCDC61Q9Y6R9 512 aa16.99■□□□□ 0.31
KNTC1-208ENST00000535410 PRR36Q9H6K5 1346 aa16.97■□□□□ 0.31
KNTC1-208ENST00000535410 PAK3O75914 559 aaPredicted RBP16.97■□□□□ 0.31
KNTC1-208ENST00000535410 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
KNTC1-208ENST00000535410 UNC5CLQ8IV45 518 aa16.96■□□□□ 0.31
KNTC1-208ENST00000535410 ROCK2O75116 1388 aaKnown RBP16.94■□□□□ 0.3
KNTC1-208ENST00000535410 PLEKHG3A1L390 1219 aa16.94■□□□□ 0.3
KNTC1-208ENST00000535410 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
KNTC1-208ENST00000535410 ARHGEF28Q8N1W1 1705 aaKnown RBP16.93■□□□□ 0.3
KNTC1-208ENST00000535410 RGPD8O14715 1765 aaPredicted RBP16.93■□□□□ 0.3
KNTC1-208ENST00000535410 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
KNTC1-208ENST00000535410 ATRNO75882 1429 aa16.93■□□□□ 0.3
KNTC1-208ENST00000535410 EVC2Q86UK5 1308 aa16.93■□□□□ 0.3
KNTC1-208ENST00000535410 TONSLQ96HA7 1378 aa16.92■□□□□ 0.3
KNTC1-208ENST00000535410 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
KNTC1-208ENST00000535410 NBPF8Q3BBV2 869 aa16.92■□□□□ 0.3
KNTC1-208ENST00000535410 BCL9LQ86UU0 1499 aa16.92■□□□□ 0.3
KNTC1-208ENST00000535410 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
KNTC1-208ENST00000535410 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
KNTC1-208ENST00000535410 ATP7BP35670 1465 aa16.9■□□□□ 0.3
KNTC1-208ENST00000535410 ACEP12821 1306 aa16.9■□□□□ 0.3
KNTC1-208ENST00000535410 POLR3AO14802 1390 aaPredicted RBP16.89■□□□□ 0.3
KNTC1-208ENST00000535410 SLIT2O94813 1529 aa16.89■□□□□ 0.29
KNTC1-208ENST00000535410 BRD4O60885 1362 aaPredicted RBP16.89■□□□□ 0.29
KNTC1-208ENST00000535410 RGS12O14924 1447 aa16.88■□□□□ 0.29
KNTC1-208ENST00000535410 FAM83GA6ND36 823 aa16.88■□□□□ 0.29
KNTC1-208ENST00000535410 VPS72Q15906 364 aa16.88■□□□□ 0.29
KNTC1-208ENST00000535410 CABP2Q9NPB3 220 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms