RNA–Protein interactions for RNA: ENST00000535076.5

SNHG1-201, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-201ENST00000535076 RBM10P98175 930 aaKnown RBP7.28□□□□□ -1.24
SNHG1-201ENST00000535076 THAP11Q96EK4 314 aa7.28□□□□□ -1.24
SNHG1-201ENST00000535076 ARID3AQ99856 593 aa7.28□□□□□ -1.24
SNHG1-201ENST00000535076 ADH1BP00325 375 aa7.27□□□□□ -1.25
SNHG1-201ENST00000535076 SULF1Q8IWU6 871 aa7.27□□□□□ -1.25
SNHG1-201ENST00000535076 PRKD2Q9BZL6 878 aa7.27□□□□□ -1.25
SNHG1-201ENST00000535076 FAM217BQ9NTX9 383 aaPredicted RBP7.27□□□□□ -1.25
SNHG1-201ENST00000535076 SLC27A5Q9Y2P5 690 aa7.27□□□□□ -1.25
SNHG1-201ENST00000535076 LOC105371045A0A1W2PR82 267 aa7.26□□□□□ -1.25
SNHG1-201ENST00000535076 NR1I2O75469 434 aa7.26□□□□□ -1.25
SNHG1-201ENST00000535076 DEKP35659 375 aaKnown RBP7.26□□□□□ -1.25
SNHG1-201ENST00000535076 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
SNHG1-201ENST00000535076 ATP6V1AP38606 617 aa7.25□□□□□ -1.25
SNHG1-201ENST00000535076 PLA2G2CQ5R387 149 aa7.25□□□□□ -1.25
SNHG1-201ENST00000535076 RNF19BQ6ZMZ0 732 aa7.25□□□□□ -1.25
SNHG1-201ENST00000535076 FAM160A2Q8N612 972 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-201ENST00000535076 CCDC136Q96JN2 1154 aa7.25□□□□□ -1.25
SNHG1-201ENST00000535076 NAP1L5Q96NT1 182 aaPredicted RBP7.25□□□□□ -1.25
SNHG1-201ENST00000535076 PRDM9Q9NQV7 894 aa7.25□□□□□ -1.25
SNHG1-201ENST00000535076 CLCN1P35523 988 aa7.24□□□□□ -1.25
SNHG1-201ENST00000535076 GUCA2AQ02747 115 aa7.24□□□□□ -1.25
SNHG1-201ENST00000535076 AMHR2Q16671 573 aa7.24□□□□□ -1.25
SNHG1-201ENST00000535076 KRI1Q8N9T8 703 aaKnown RBP7.24□□□□□ -1.25
SNHG1-201ENST00000535076 TRIM66O15016 1216 aa7.23□□□□□ -1.25
SNHG1-201ENST00000535076 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-201ENST00000535076 SPSB2Q99619 263 aa7.23□□□□□ -1.25
SNHG1-201ENST00000535076 IRX2Q9BZI1 471 aaPredicted RBP7.23□□□□□ -1.25
SNHG1-201ENST00000535076 FANCIQ9NVI1 1328 aa7.23□□□□□ -1.25
SNHG1-201ENST00000535076 KDM4AO75164 1064 aa7.22□□□□□ -1.25
SNHG1-201ENST00000535076 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
SNHG1-201ENST00000535076 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
SNHG1-201ENST00000535076 PARP9Q8IXQ6 854 aa7.22□□□□□ -1.25
SNHG1-201ENST00000535076 YTHDC1Q96MU7 727 aaKnown RBP7.22□□□□□ -1.25
SNHG1-201ENST00000535076 HOXA2O43364 376 aa7.21□□□□□ -1.26
SNHG1-201ENST00000535076 LIAT1Q6ZQX7 453 aa7.21□□□□□ -1.26
SNHG1-201ENST00000535076 DHX37Q8IY37 1157 aaKnown RBP7.21□□□□□ -1.26
SNHG1-201ENST00000535076 SLC6A16Q9GZN6 736 aa7.21□□□□□ -1.26
SNHG1-201ENST00000535076 LCE2BO14633 110 aa7.2□□□□□ -1.26
SNHG1-201ENST00000535076 SSTR3P32745 418 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-201ENST00000535076 GGCXP38435 758 aa7.2□□□□□ -1.26
SNHG1-201ENST00000535076 GIGYF2Q6Y7W6 1299 aaKnown RBP7.2□□□□□ -1.26
SNHG1-201ENST00000535076 TRIM67Q6ZTA4 783 aa7.2□□□□□ -1.26
SNHG1-201ENST00000535076 SLC24A3Q9HC58 644 aa7.2□□□□□ -1.26
SNHG1-201ENST00000535076 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
SNHG1-201ENST00000535076 SHROOM4Q9ULL8 1493 aa7.19□□□□□ -1.26
SNHG1-201ENST00000535076 C11orf95C9JLR9 678 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-201ENST00000535076 MS4A1P11836 297 aa7.19□□□□□ -1.26
SNHG1-201ENST00000535076 TTLL12Q14166 644 aaPredicted RBP7.19□□□□□ -1.26
SNHG1-201ENST00000535076 ANKLE1Q8NAG6 615 aa7.19□□□□□ -1.26
SNHG1-201ENST00000535076 FMNL1O95466 1100 aaPredicted RBP7.18□□□□□ -1.26
SNHG1-201ENST00000535076 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
SNHG1-201ENST00000535076 SYMPKQ92797 1274 aaKnown RBP7.18□□□□□ -1.26
SNHG1-201ENST00000535076 PCDHGC3Q9UN70 934 aa7.18□□□□□ -1.26
SNHG1-201ENST00000535076 SLC19A1P41440 591 aa7.17□□□□□ -1.26
SNHG1-201ENST00000535076 AK7Q96M32 723 aa7.17□□□□□ -1.26
SNHG1-201ENST00000535076 A0A0U1RQG5 324 aaPredicted RBP7.16□□□□□ -1.26
SNHG1-201ENST00000535076 USP46P62068 366 aa7.16□□□□□ -1.26
SNHG1-201ENST00000535076 MSS51Q4VC12 460 aa7.16□□□□□ -1.26
SNHG1-201ENST00000535076 IPO4Q8TEX9 1081 aaKnown RBP7.16□□□□□ -1.26
SNHG1-201ENST00000535076 FCF1Q9Y324 198 aaKnown RBP7.16□□□□□ -1.26
SNHG1-201ENST00000535076 NDUFV2P19404 249 aa7.15□□□□□ -1.26
SNHG1-201ENST00000535076 SPRYD7Q5W111 196 aa7.15□□□□□ -1.26
SNHG1-201ENST00000535076 TEX2Q8IWB9 1127 aa7.15□□□□□ -1.26
SNHG1-201ENST00000535076 SUPT16HQ9Y5B9 1047 aaKnown RBP7.15□□□□□ -1.26
SNHG1-201ENST00000535076 MOXD2PA6NHM9 499 aa7.14□□□□□ -1.27
SNHG1-201ENST00000535076 GFRA3O60609 400 aa7.14□□□□□ -1.27
SNHG1-201ENST00000535076 PDE4DQ08499 809 aa7.14□□□□□ -1.27
SNHG1-201ENST00000535076 DIEXFQ68CQ4 756 aaKnown RBP7.14□□□□□ -1.27
SNHG1-201ENST00000535076 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
SNHG1-201ENST00000535076 GRIPAP1Q4V328 841 aa7.13□□□□□ -1.27
SNHG1-201ENST00000535076 NUTM1Q86Y26 1132 aa7.13□□□□□ -1.27
SNHG1-201ENST00000535076 CCER1Q8TC90 406 aaPredicted RBP7.13□□□□□ -1.27
SNHG1-201ENST00000535076 USB1Q9BQ65 265 aaKnown RBP7.13□□□□□ -1.27
SNHG1-201ENST00000535076 MYO15BQ96JP2 1530 aa7.12□□□□□ -1.27
SNHG1-201ENST00000535076 RRP9O43818 475 aaKnown RBP7.12□□□□□ -1.27
SNHG1-201ENST00000535076 DXOO77932 396 aaKnown RBP7.12□□□□□ -1.27
SNHG1-201ENST00000535076 MMP16P51512 607 aa7.12□□□□□ -1.27
SNHG1-201ENST00000535076 Q3C1V9 767 aa7.12□□□□□ -1.27
SNHG1-201ENST00000535076 TBC1D2Q9BYX2 928 aa7.12□□□□□ -1.27
SNHG1-201ENST00000535076 NAP1L2Q9ULW6 460 aaPredicted RBP7.12□□□□□ -1.27
SNHG1-201ENST00000535076 RBM19Q9Y4C8 960 aaKnown RBP7.12□□□□□ -1.27
SNHG1-201ENST00000535076 FDX1P10109 184 aa7.11□□□□□ -1.27
SNHG1-201ENST00000535076 ZNF697Q5TEC3 545 aa7.11□□□□□ -1.27
SNHG1-201ENST00000535076 PDZRN3Q9UPQ7 1066 aa7.11□□□□□ -1.27
SNHG1-201ENST00000535076 ARID4BQ4LE39 1312 aaPredicted RBP7.1□□□□□ -1.27
SNHG1-201ENST00000535076 GDF9O60383 454 aa7.1□□□□□ -1.27
SNHG1-201ENST00000535076 NCLP19338 710 aaKnown RBP7.1□□□□□ -1.27
SNHG1-201ENST00000535076 ZNF598Q86UK7 904 aaKnown RBP7.1□□□□□ -1.27
SNHG1-201ENST00000535076 PUS7Q96PZ0 661 aaKnown RBP7.1□□□□□ -1.27
SNHG1-201ENST00000535076 PKD2L1Q9P0L9 805 aa7.1□□□□□ -1.27
SNHG1-201ENST00000535076 PCDHB15Q9Y5E8 787 aa7.1□□□□□ -1.27
SNHG1-201ENST00000535076 TNFRSF10AO00220 468 aa7.09□□□□□ -1.27
SNHG1-201ENST00000535076 NRG2O14511 850 aaPredicted RBP7.09□□□□□ -1.27
SNHG1-201ENST00000535076 Q6ZNB5 142 aa7.09□□□□□ -1.27
SNHG1-201ENST00000535076 RSBN1LQ6PCB5 846 aaPredicted RBP7.08□□□□□ -1.28
SNHG1-201ENST00000535076 TICAM2Q86XR7 235 aa7.08□□□□□ -1.28
SNHG1-201ENST00000535076 CCDC9Q9Y3X0 531 aaKnown RBP7.08□□□□□ -1.28
SNHG1-201ENST00000535076 CENPJQ9HC77 1338 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-201ENST00000535076 CLSTN1O94985 981 aa7.07□□□□□ -1.28
SNHG1-201ENST00000535076 JUNDP17535 347 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms