RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ZNF772Q68DY9 489 aaPredicted RBP27.81■■■□□ 2.04
NDUFS3-213ENST00000534716 SOS2Q07890 1332 aaPredicted RBP27.81■■■□□ 2.04
NDUFS3-213ENST00000534716 TMEM132EQ6IEE7 984 aa27.8■■■□□ 2.04
NDUFS3-213ENST00000534716 SIRT1Q96EB6 747 aa27.8■■■□□ 2.04
NDUFS3-213ENST00000534716 PNPLA6Q8IY17 1366 aa27.8■■■□□ 2.04
NDUFS3-213ENST00000534716 KNDC1Q76NI1 1749 aa27.79■■■□□ 2.04
NDUFS3-213ENST00000534716 YTHDC2Q9H6S0 1430 aaKnown RBP27.79■■■□□ 2.04
NDUFS3-213ENST00000534716 STK26Q9P289 416 aa27.79■■■□□ 2.04
NDUFS3-213ENST00000534716 WAPLQ7Z5K2 1190 aa27.78■■■□□ 2.04
NDUFS3-213ENST00000534716 NUTM2BA6NNL0 878 aaPredicted RBP27.76■■■□□ 2.03
NDUFS3-213ENST00000534716 NUTM2EB1AL46 878 aaPredicted RBP27.76■■■□□ 2.03
NDUFS3-213ENST00000534716 NUTM2AQ8IVF1 878 aaPredicted RBP27.76■■■□□ 2.03
NDUFS3-213ENST00000534716 PLEKHH1Q9ULM0 1364 aa27.73■■■□□ 2.03
NDUFS3-213ENST00000534716 CFAP70Q5T0N1 1121 aa27.72■■■□□ 2.03
NDUFS3-213ENST00000534716 DHX57Q6P158 1386 aaKnown RBP27.72■■■□□ 2.03
NDUFS3-213ENST00000534716 ESCO1Q5FWF5 840 aa27.71■■■□□ 2.03
NDUFS3-213ENST00000534716 NPHP3Q7Z494 1330 aa27.7■■■□□ 2.03
NDUFS3-213ENST00000534716 STAC3Q96MF2 364 aa27.68■■■□□ 2.02
NDUFS3-213ENST00000534716 AFF2P51816 1311 aa27.67■■■□□ 2.02
NDUFS3-213ENST00000534716 PXDNQ92626 1479 aa27.66■■■□□ 2.02
NDUFS3-213ENST00000534716 COL22A1Q8NFW1 1626 aaPredicted RBP27.63■■■□□ 2.01
NDUFS3-213ENST00000534716 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
NDUFS3-213ENST00000534716 FOXO3O43524 673 aa27.63■■■□□ 2.01
NDUFS3-213ENST00000534716 RXRBP28702 533 aa27.63■■■□□ 2.01
NDUFS3-213ENST00000534716 FMN2Q9NZ56 1722 aa27.62■■■□□ 2.01
NDUFS3-213ENST00000534716 ADGRB1O14514 1584 aa27.62■■■□□ 2.01
NDUFS3-213ENST00000534716 C8orf37Q96NL8 207 aa27.62■■■□□ 2.01
NDUFS3-213ENST00000534716 CDK12Q9NYV4 1490 aaPredicted RBP27.62■■■□□ 2.01
NDUFS3-213ENST00000534716 NUTM2FA1L443 756 aa27.6■■■□□ 2.01
NDUFS3-213ENST00000534716 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
NDUFS3-213ENST00000534716 DCAF11Q8TEB1 546 aa27.59■■■□□ 2.01
NDUFS3-213ENST00000534716 ADAMTS2O95450 1211 aa27.57■■■□□ 2
NDUFS3-213ENST00000534716 KIF1AQ12756 1690 aa27.56■■■□□ 2
NDUFS3-213ENST00000534716 NGLY1Q96IV0 654 aa27.56■■■□□ 2
NDUFS3-213ENST00000534716 QTRT2Q9H974 415 aaKnown RBP27.56■■■□□ 2
NDUFS3-213ENST00000534716 KDM2AQ9Y2K7 1162 aa27.55■■■□□ 2
NDUFS3-213ENST00000534716 FNBP4Q8N3X1 1017 aaPredicted RBP27.54■■■□□ 2
NDUFS3-213ENST00000534716 RBM6P78332 1123 aaKnown RBP27.53■■■□□ 2
NDUFS3-213ENST00000534716 XPCQ01831 940 aaPredicted RBP27.53■■■□□ 2
NDUFS3-213ENST00000534716 POGKQ9P215 609 aa27.53■■■□□ 2
NDUFS3-213ENST00000534716 ADGRB2O60241 1585 aa27.52■■■□□ 2
NDUFS3-213ENST00000534716 SPATA31A3Q5VYP0 1347 aa27.51■■□□□ 1.99
NDUFS3-213ENST00000534716 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
NDUFS3-213ENST00000534716 ANKARQ7Z5J8 1434 aa27.5■■□□□ 1.99
NDUFS3-213ENST00000534716 SAFB2Q14151 953 aaKnown RBP eCLIP27.5■■□□□ 1.99
NDUFS3-213ENST00000534716 KRT28Q7Z3Y7 464 aa27.49■■□□□ 1.99
NDUFS3-213ENST00000534716 TRAK1Q9UPV9 953 aa27.49■■□□□ 1.99
NDUFS3-213ENST00000534716 USP21Q9UK80 565 aa27.48■■□□□ 1.99
NDUFS3-213ENST00000534716 UPF1Q92900 1129 aaKnown RBP eCLIP27.46■■□□□ 1.99
NDUFS3-213ENST00000534716 PSME1Q06323 249 aa27.45■■□□□ 1.98
NDUFS3-213ENST00000534716 TRPC5Q9UL62 973 aaPredicted RBP27.45■■□□□ 1.98
NDUFS3-213ENST00000534716 RGS12O14924 1447 aa27.44■■□□□ 1.98
NDUFS3-213ENST00000534716 SBNO1A3KN83 1393 aa27.44■■□□□ 1.98
NDUFS3-213ENST00000534716 USP32Q8NFA0 1604 aa27.43■■□□□ 1.98
NDUFS3-213ENST00000534716 EIF3AQ14152 1382 aaKnown RBP27.43■■□□□ 1.98
NDUFS3-213ENST00000534716 ATRNO75882 1429 aa27.42■■□□□ 1.98
NDUFS3-213ENST00000534716 TNS3Q68CZ2 1445 aa27.42■■□□□ 1.98
NDUFS3-213ENST00000534716 RGPD8O14715 1765 aaPredicted RBP27.42■■□□□ 1.98
NDUFS3-213ENST00000534716 BCL9LQ86UU0 1499 aa27.41■■□□□ 1.98
NDUFS3-213ENST00000534716 WASLO00401 505 aaPredicted RBP27.4■■□□□ 1.98
NDUFS3-213ENST00000534716 HIRIP3Q9BW71 556 aaPredicted RBP27.4■■□□□ 1.98
NDUFS3-213ENST00000534716 MINK1Q8N4C8 1332 aaPredicted RBP27.4■■□□□ 1.98
NDUFS3-213ENST00000534716 MARF1Q9Y4F3 1742 aaKnown RBP27.39■■□□□ 1.98
NDUFS3-213ENST00000534716 TULP4Q9NRJ4 1543 aa27.39■■□□□ 1.98
NDUFS3-213ENST00000534716 PRR36Q9H6K5 1346 aa27.37■■□□□ 1.97
NDUFS3-213ENST00000534716 ARHGEF10O15013 1369 aa27.36■■□□□ 1.97
NDUFS3-213ENST00000534716 PMFBP1Q8TBY8 1022 aa27.35■■□□□ 1.97
NDUFS3-213ENST00000534716 KIAA1210Q9ULL0 1709 aa27.35■■□□□ 1.97
NDUFS3-213ENST00000534716 SLIT2O94813 1529 aa27.35■■□□□ 1.97
NDUFS3-213ENST00000534716 ARHGEF28Q8N1W1 1705 aaKnown RBP27.34■■□□□ 1.97
NDUFS3-213ENST00000534716 UNC5CLQ8IV45 518 aa27.31■■□□□ 1.96
NDUFS3-213ENST00000534716 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.3■■□□□ 1.96
NDUFS3-213ENST00000534716 GPRASP1Q5JY77 1395 aa27.3■■□□□ 1.96
NDUFS3-213ENST00000534716 GJD4Q96KN9 370 aaPredicted RBP27.29■■□□□ 1.96
NDUFS3-213ENST00000534716 CABLES1Q8TDN4 633 aa27.28■■□□□ 1.96
NDUFS3-213ENST00000534716 TRPM3Q9HCF6 1732 aaPredicted RBP27.27■■□□□ 1.96
NDUFS3-213ENST00000534716 ATP7BP35670 1465 aa27.27■■□□□ 1.96
NDUFS3-213ENST00000534716 NBPF1Q3BBV0 1214 aa27.26■■□□□ 1.95
NDUFS3-213ENST00000534716 ATAD2Q6PL18 1390 aa27.25■■□□□ 1.95
NDUFS3-213ENST00000534716 HAP1P54257 671 aaPredicted RBP27.25■■□□□ 1.95
NDUFS3-213ENST00000534716 LMOD2Q6P5Q4 547 aa27.25■■□□□ 1.95
NDUFS3-213ENST00000534716 NUDT16Q96DE0 195 aaKnown RBP27.25■■□□□ 1.95
NDUFS3-213ENST00000534716 ABCA3Q99758 1704 aa27.24■■□□□ 1.95
NDUFS3-213ENST00000534716 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
NDUFS3-213ENST00000534716 NGDNQ8NEJ9 315 aaKnown RBP27.23■■□□□ 1.95
NDUFS3-213ENST00000534716 CDK19Q9BWU1 502 aa27.23■■□□□ 1.95
NDUFS3-213ENST00000534716 RALGAPBQ86X10 1494 aa27.22■■□□□ 1.95
NDUFS3-213ENST00000534716 L3MBTL2Q969R5 705 aa27.21■■□□□ 1.95
NDUFS3-213ENST00000534716 VPS72Q15906 364 aa27.2■■□□□ 1.94
NDUFS3-213ENST00000534716 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
NDUFS3-213ENST00000534716 NWD2Q9ULI1 1742 aa27.19■■□□□ 1.94
NDUFS3-213ENST00000534716 GLI3P10071 1580 aa27.19■■□□□ 1.94
NDUFS3-213ENST00000534716 FAM83GA6ND36 823 aa27.19■■□□□ 1.94
NDUFS3-213ENST00000534716 EP400Q96L91 3159 aa27.18■■□□□ 1.94
NDUFS3-213ENST00000534716 CCDC61Q9Y6R9 512 aa27.18■■□□□ 1.94
NDUFS3-213ENST00000534716 POLR3AO14802 1390 aaPredicted RBP27.18■■□□□ 1.94
NDUFS3-213ENST00000534716 PLEKHG3A1L390 1219 aa27.16■■□□□ 1.94
NDUFS3-213ENST00000534716 PLCH1Q4KWH8 1693 aa27.16■■□□□ 1.94
NDUFS3-213ENST00000534716 TOPAZ1Q8N9V7 1692 aa27.15■■□□□ 1.94
NDUFS3-213ENST00000534716 SIN3AQ96ST3 1273 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms