RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 KNDC1Q76NI1 1749 aa31.63■■■□□ 2.65
GSDMD-216ENST00000534602 YTHDC2Q9H6S0 1430 aaKnown RBP31.61■■■□□ 2.65
GSDMD-216ENST00000534602 DDX17Q92841 729 aaKnown RBP31.61■■■□□ 2.65
GSDMD-216ENST00000534602 SIRT1Q96EB6 747 aa31.61■■■□□ 2.65
GSDMD-216ENST00000534602 ORAI2Q96SN7 254 aa31.61■■■□□ 2.65
GSDMD-216ENST00000534602 WAPLQ7Z5K2 1190 aa31.59■■■□□ 2.65
GSDMD-216ENST00000534602 SOS2Q07890 1332 aaPredicted RBP31.57■■■□□ 2.64
GSDMD-216ENST00000534602 ZNF772Q68DY9 489 aaPredicted RBP31.57■■■□□ 2.64
GSDMD-216ENST00000534602 PNPLA6Q8IY17 1366 aa31.56■■■□□ 2.64
GSDMD-216ENST00000534602 DHX57Q6P158 1386 aaKnown RBP31.56■■■□□ 2.64
GSDMD-216ENST00000534602 NUTM2BA6NNL0 878 aaPredicted RBP31.55■■■□□ 2.64
GSDMD-216ENST00000534602 NUTM2EB1AL46 878 aaPredicted RBP31.55■■■□□ 2.64
GSDMD-216ENST00000534602 CFAP70Q5T0N1 1121 aa31.55■■■□□ 2.64
GSDMD-216ENST00000534602 NUTM2AQ8IVF1 878 aaPredicted RBP31.55■■■□□ 2.64
GSDMD-216ENST00000534602 STAC3Q96MF2 364 aa31.53■■■□□ 2.64
GSDMD-216ENST00000534602 PLEKHH1Q9ULM0 1364 aa31.53■■■□□ 2.64
GSDMD-216ENST00000534602 ESCO1Q5FWF5 840 aa31.51■■■□□ 2.63
GSDMD-216ENST00000534602 NPHP3Q7Z494 1330 aa31.49■■■□□ 2.63
GSDMD-216ENST00000534602 DCAF11Q8TEB1 546 aa31.44■■■□□ 2.62
GSDMD-216ENST00000534602 DLC1Q96QB1 1528 aa31.44■■■□□ 2.62
GSDMD-216ENST00000534602 FMN2Q9NZ56 1722 aa31.44■■■□□ 2.62
GSDMD-216ENST00000534602 AFF2P51816 1311 aa31.42■■■□□ 2.62
GSDMD-216ENST00000534602 PXDNQ92626 1479 aa31.41■■■□□ 2.62
GSDMD-216ENST00000534602 FOXO3O43524 673 aa31.41■■■□□ 2.62
GSDMD-216ENST00000534602 ADGRB1O14514 1584 aa31.41■■■□□ 2.62
GSDMD-216ENST00000534602 NUTM2FA1L443 756 aa31.4■■■□□ 2.62
GSDMD-216ENST00000534602 PRAM1Q96QH2 718 aa31.4■■■□□ 2.62
GSDMD-216ENST00000534602 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
GSDMD-216ENST00000534602 COL22A1Q8NFW1 1626 aaPredicted RBP31.38■■■□□ 2.61
GSDMD-216ENST00000534602 C8orf37Q96NL8 207 aa31.38■■■□□ 2.61
GSDMD-216ENST00000534602 RXRBP28702 533 aa31.37■■■□□ 2.61
GSDMD-216ENST00000534602 KIF1AQ12756 1690 aa31.36■■■□□ 2.61
GSDMD-216ENST00000534602 POGKQ9P215 609 aa31.36■■■□□ 2.61
GSDMD-216ENST00000534602 ADAMTS2O95450 1211 aa31.34■■■□□ 2.61
GSDMD-216ENST00000534602 CDK12Q9NYV4 1490 aaPredicted RBP31.33■■■□□ 2.61
GSDMD-216ENST00000534602 NGLY1Q96IV0 654 aa31.32■■■□□ 2.6
GSDMD-216ENST00000534602 XPCQ01831 940 aaPredicted RBP31.31■■■□□ 2.6
GSDMD-216ENST00000534602 SAFB2Q14151 953 aaKnown RBP eCLIP31.31■■■□□ 2.6
GSDMD-216ENST00000534602 TRAK1Q9UPV9 953 aa31.31■■■□□ 2.6
GSDMD-216ENST00000534602 ADGRB2O60241 1585 aa31.3■■■□□ 2.6
GSDMD-216ENST00000534602 PHF8Q9UPP1 1060 aa31.29■■■□□ 2.6
GSDMD-216ENST00000534602 QTRT2Q9H974 415 aaKnown RBP31.28■■■□□ 2.6
GSDMD-216ENST00000534602 ANKARQ7Z5J8 1434 aa31.27■■■□□ 2.6
GSDMD-216ENST00000534602 SPATA31A3Q5VYP0 1347 aa31.26■■■□□ 2.6
GSDMD-216ENST00000534602 FNBP4Q8N3X1 1017 aaPredicted RBP31.26■■■□□ 2.59
GSDMD-216ENST00000534602 RGPD8O14715 1765 aaPredicted RBP31.25■■■□□ 2.59
GSDMD-216ENST00000534602 RBM6P78332 1123 aaKnown RBP31.25■■■□□ 2.59
GSDMD-216ENST00000534602 KRT28Q7Z3Y7 464 aa31.25■■■□□ 2.59
GSDMD-216ENST00000534602 PSME1Q06323 249 aa31.24■■■□□ 2.59
GSDMD-216ENST00000534602 EIF3AQ14152 1382 aaKnown RBP31.22■■■□□ 2.59
GSDMD-216ENST00000534602 USP21Q9UK80 565 aa31.21■■■□□ 2.59
GSDMD-216ENST00000534602 USP32Q8NFA0 1604 aa31.19■■■□□ 2.58
GSDMD-216ENST00000534602 MINK1Q8N4C8 1332 aaPredicted RBP31.19■■■□□ 2.58
GSDMD-216ENST00000534602 SBNO1A3KN83 1393 aa31.18■■■□□ 2.58
GSDMD-216ENST00000534602 HIRIP3Q9BW71 556 aaPredicted RBP31.18■■■□□ 2.58
GSDMD-216ENST00000534602 TRPC5Q9UL62 973 aaPredicted RBP31.18■■■□□ 2.58
GSDMD-216ENST00000534602 WASLO00401 505 aaPredicted RBP31.17■■■□□ 2.58
GSDMD-216ENST00000534602 KIAA1210Q9ULL0 1709 aa31.17■■■□□ 2.58
GSDMD-216ENST00000534602 MARF1Q9Y4F3 1742 aaKnown RBP31.17■■■□□ 2.58
GSDMD-216ENST00000534602 TNS3Q68CZ2 1445 aa31.16■■■□□ 2.58
GSDMD-216ENST00000534602 TULP4Q9NRJ4 1543 aa31.14■■■□□ 2.58
GSDMD-216ENST00000534602 ARHGEF28Q8N1W1 1705 aaKnown RBP31.14■■■□□ 2.58
GSDMD-216ENST00000534602 RGS12O14924 1447 aa31.13■■■□□ 2.57
GSDMD-216ENST00000534602 PMFBP1Q8TBY8 1022 aa31.12■■■□□ 2.57
GSDMD-216ENST00000534602 UPF1Q92900 1129 aaKnown RBP eCLIP31.12■■■□□ 2.57
GSDMD-216ENST00000534602 ARHGEF10O15013 1369 aa31.12■■■□□ 2.57
GSDMD-216ENST00000534602 ATRNO75882 1429 aa31.12■■■□□ 2.57
GSDMD-216ENST00000534602 BCL9LQ86UU0 1499 aa31.11■■■□□ 2.57
GSDMD-216ENST00000534602 PRR36Q9H6K5 1346 aa31.11■■■□□ 2.57
GSDMD-216ENST00000534602 GPRASP1Q5JY77 1395 aa31.06■■■□□ 2.56
GSDMD-216ENST00000534602 SLIT2O94813 1529 aa31.04■■■□□ 2.56
GSDMD-216ENST00000534602 NBPF1Q3BBV0 1214 aa31.04■■■□□ 2.56
GSDMD-216ENST00000534602 HAP1P54257 671 aaPredicted RBP31.03■■■□□ 2.56
GSDMD-216ENST00000534602 LMOD2Q6P5Q4 547 aa31.03■■■□□ 2.56
GSDMD-216ENST00000534602 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.03■■■□□ 2.56
GSDMD-216ENST00000534602 TRPM3Q9HCF6 1732 aaPredicted RBP31.02■■■□□ 2.56
GSDMD-216ENST00000534602 UNC5CLQ8IV45 518 aa31.02■■■□□ 2.56
GSDMD-216ENST00000534602 CABLES1Q8TDN4 633 aa31.01■■■□□ 2.55
GSDMD-216ENST00000534602 NUDT16Q96DE0 195 aaKnown RBP31.01■■■□□ 2.55
GSDMD-216ENST00000534602 ATP7BP35670 1465 aa31.01■■■□□ 2.55
GSDMD-216ENST00000534602 NGDNQ8NEJ9 315 aaKnown RBP31■■■□□ 2.55
GSDMD-216ENST00000534602 L3MBTL2Q969R5 705 aa31■■■□□ 2.55
GSDMD-216ENST00000534602 GJD4Q96KN9 370 aaPredicted RBP31■■■□□ 2.55
GSDMD-216ENST00000534602 ITSN1Q15811 1721 aa30.99■■■□□ 2.55
GSDMD-216ENST00000534602 CDK19Q9BWU1 502 aa30.99■■■□□ 2.55
GSDMD-216ENST00000534602 ABCA3Q99758 1704 aa30.97■■■□□ 2.55
GSDMD-216ENST00000534602 ALS2Q96Q42 1657 aa30.97■■■□□ 2.55
GSDMD-216ENST00000534602 SIN3AQ96ST3 1273 aa30.95■■■□□ 2.55
GSDMD-216ENST00000534602 ATAD2Q6PL18 1390 aa30.94■■■□□ 2.54
GSDMD-216ENST00000534602 CCDC61Q9Y6R9 512 aa30.93■■■□□ 2.54
GSDMD-216ENST00000534602 NWD2Q9ULI1 1742 aa30.92■■■□□ 2.54
GSDMD-216ENST00000534602 CENPJQ9HC77 1338 aaPredicted RBP30.92■■■□□ 2.54
GSDMD-216ENST00000534602 RALGAPBQ86X10 1494 aa30.9■■■□□ 2.54
GSDMD-216ENST00000534602 PLEKHG5O94827 1062 aa30.9■■■□□ 2.54
GSDMD-216ENST00000534602 POLR3AO14802 1390 aaPredicted RBP30.9■■■□□ 2.54
GSDMD-216ENST00000534602 PLEKHG3A1L390 1219 aa30.89■■■□□ 2.54
GSDMD-216ENST00000534602 FAM83GA6ND36 823 aa30.89■■■□□ 2.54
GSDMD-216ENST00000534602 VPS72Q15906 364 aa30.89■■■□□ 2.54
GSDMD-216ENST00000534602 TOPAZ1Q8N9V7 1692 aa30.89■■■□□ 2.54
GSDMD-216ENST00000534602 PLCH1Q4KWH8 1693 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms