RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 ACIN1Q9UKV3 1341 aaKnown RBP26.37■■□□□ 1.81
RECQL4-207ENST00000534538 RBM6P78332 1123 aaKnown RBP26.36■■□□□ 1.81
RECQL4-207ENST00000534538 NGLY1Q96IV0 654 aa26.35■■□□□ 1.81
RECQL4-207ENST00000534538 ADAMTS2O95450 1211 aa26.34■■□□□ 1.81
RECQL4-207ENST00000534538 TECPR2O15040 1411 aa26.33■■□□□ 1.81
RECQL4-207ENST00000534538 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.8
RECQL4-207ENST00000534538 ABCC11Q96J66 1382 aa26.33■■□□□ 1.8
RECQL4-207ENST00000534538 ESCO1Q5FWF5 840 aa26.32■■□□□ 1.8
RECQL4-207ENST00000534538 STK26Q9P289 416 aa26.32■■□□□ 1.8
RECQL4-207ENST00000534538 NPHP3Q7Z494 1330 aa26.32■■□□□ 1.8
RECQL4-207ENST00000534538 CDC42BPGQ6DT37 1551 aa26.31■■□□□ 1.8
RECQL4-207ENST00000534538 WAPLQ7Z5K2 1190 aa26.3■■□□□ 1.8
RECQL4-207ENST00000534538 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
RECQL4-207ENST00000534538 FNBP4Q8N3X1 1017 aaPredicted RBP26.28■■□□□ 1.8
RECQL4-207ENST00000534538 PIK3C2GO75747 1445 aa26.28■■□□□ 1.8
RECQL4-207ENST00000534538 SIRT1Q96EB6 747 aa26.27■■□□□ 1.8
RECQL4-207ENST00000534538 IFT172Q9UG01 1749 aa26.27■■□□□ 1.8
RECQL4-207ENST00000534538 RGS12O14924 1447 aa26.25■■□□□ 1.79
RECQL4-207ENST00000534538 FOXO3O43524 673 aa26.25■■□□□ 1.79
RECQL4-207ENST00000534538 USP21Q9UK80 565 aa26.25■■□□□ 1.79
RECQL4-207ENST00000534538 COL22A1Q8NFW1 1626 aaPredicted RBP26.25■■□□□ 1.79
RECQL4-207ENST00000534538 C14orf93Q9H972 538 aaKnown RBP26.24■■□□□ 1.79
RECQL4-207ENST00000534538 PXDNQ92626 1479 aa26.23■■□□□ 1.79
RECQL4-207ENST00000534538 TRPC5Q9UL62 973 aaPredicted RBP26.23■■□□□ 1.79
RECQL4-207ENST00000534538 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
RECQL4-207ENST00000534538 PLEKHH1Q9ULM0 1364 aa26.21■■□□□ 1.79
RECQL4-207ENST00000534538 MYOM2P54296 1465 aa26.21■■□□□ 1.79
RECQL4-207ENST00000534538 KNDC1Q76NI1 1749 aa26.2■■□□□ 1.79
RECQL4-207ENST00000534538 NUTM2FA1L443 756 aa26.19■■□□□ 1.78
RECQL4-207ENST00000534538 XPCQ01831 940 aaPredicted RBP26.19■■□□□ 1.78
RECQL4-207ENST00000534538 NRXN1Q9ULB1 1477 aa26.17■■□□□ 1.78
RECQL4-207ENST00000534538 ATRNO75882 1429 aa26.16■■□□□ 1.78
RECQL4-207ENST00000534538 DHX57Q6P158 1386 aaKnown RBP26.15■■□□□ 1.78
RECQL4-207ENST00000534538 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.78
RECQL4-207ENST00000534538 SPATA31A3Q5VYP0 1347 aa26.14■■□□□ 1.77
RECQL4-207ENST00000534538 BCL9LQ86UU0 1499 aa26.13■■□□□ 1.77
RECQL4-207ENST00000534538 FMN2Q9NZ56 1722 aa26.13■■□□□ 1.77
RECQL4-207ENST00000534538 ATAD2Q6PL18 1390 aa26.11■■□□□ 1.77
RECQL4-207ENST00000534538 KRT28Q7Z3Y7 464 aa26.11■■□□□ 1.77
RECQL4-207ENST00000534538 PHF8Q9UPP1 1060 aa26.09■■□□□ 1.77
RECQL4-207ENST00000534538 KIF1AQ12756 1690 aa26.09■■□□□ 1.77
RECQL4-207ENST00000534538 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.77
RECQL4-207ENST00000534538 PSME1Q06323 249 aa26.07■■□□□ 1.76
RECQL4-207ENST00000534538 PRAM1Q96QH2 718 aa26.07■■□□□ 1.76
RECQL4-207ENST00000534538 MARF1Q9Y4F3 1742 aaKnown RBP26.07■■□□□ 1.76
RECQL4-207ENST00000534538 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
RECQL4-207ENST00000534538 UNC5CLQ8IV45 518 aa26.04■■□□□ 1.76
RECQL4-207ENST00000534538 POGKQ9P215 609 aa26.03■■□□□ 1.76
RECQL4-207ENST00000534538 DLC1Q96QB1 1528 aa26.03■■□□□ 1.76
RECQL4-207ENST00000534538 SLIT2O94813 1529 aa26.02■■□□□ 1.76
RECQL4-207ENST00000534538 SBNO1A3KN83 1393 aa26.01■■□□□ 1.75
RECQL4-207ENST00000534538 SAFB2Q14151 953 aaKnown RBP eCLIP26.01■■□□□ 1.75
RECQL4-207ENST00000534538 STAC3Q96MF2 364 aa26.01■■□□□ 1.75
RECQL4-207ENST00000534538 TNS3Q68CZ2 1445 aa26■■□□□ 1.75
RECQL4-207ENST00000534538 CCDC125Q86Z20 511 aa26■■□□□ 1.75
RECQL4-207ENST00000534538 HRCP23327 699 aa25.99■■□□□ 1.75
RECQL4-207ENST00000534538 RGPD8O14715 1765 aaPredicted RBP25.99■■□□□ 1.75
RECQL4-207ENST00000534538 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
RECQL4-207ENST00000534538 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.97■■□□□ 1.75
RECQL4-207ENST00000534538 ADGRB1O14514 1584 aa25.97■■□□□ 1.75
RECQL4-207ENST00000534538 EP400Q96L91 3159 aa25.96■■□□□ 1.75
RECQL4-207ENST00000534538 HAP1P54257 671 aaPredicted RBP25.96■■□□□ 1.75
RECQL4-207ENST00000534538 ARHGEF10O15013 1369 aa25.95■■□□□ 1.75
RECQL4-207ENST00000534538 CABLES1Q8TDN4 633 aa25.95■■□□□ 1.74
RECQL4-207ENST00000534538 TRAK1Q9UPV9 953 aa25.95■■□□□ 1.74
RECQL4-207ENST00000534538 USP32Q8NFA0 1604 aa25.95■■□□□ 1.74
RECQL4-207ENST00000534538 RALGAPBQ86X10 1494 aa25.94■■□□□ 1.74
RECQL4-207ENST00000534538 DCAF11Q8TEB1 546 aa25.94■■□□□ 1.74
RECQL4-207ENST00000534538 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
RECQL4-207ENST00000534538 KDM2AQ9Y2K7 1162 aa25.93■■□□□ 1.74
RECQL4-207ENST00000534538 ADGRB2O60241 1585 aa25.93■■□□□ 1.74
RECQL4-207ENST00000534538 LMOD2Q6P5Q4 547 aa25.92■■□□□ 1.74
RECQL4-207ENST00000534538 VPS72Q15906 364 aa25.91■■□□□ 1.74
RECQL4-207ENST00000534538 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
RECQL4-207ENST00000534538 GLI3P10071 1580 aa25.9■■□□□ 1.74
RECQL4-207ENST00000534538 ONECUT3O60422 494 aaPredicted RBP25.89■■□□□ 1.74
RECQL4-207ENST00000534538 HIRIP3Q9BW71 556 aaPredicted RBP25.89■■□□□ 1.74
RECQL4-207ENST00000534538 WASLO00401 505 aaPredicted RBP25.88■■□□□ 1.73
RECQL4-207ENST00000534538 MINK1Q8N4C8 1332 aaPredicted RBP25.88■■□□□ 1.73
RECQL4-207ENST00000534538 SRCAPQ6ZRS2 3230 aa25.87■■□□□ 1.73
RECQL4-207ENST00000534538 ZRANB1Q9UGI0 708 aa25.87■■□□□ 1.73
RECQL4-207ENST00000534538 GPRASP1Q5JY77 1395 aa25.86■■□□□ 1.73
RECQL4-207ENST00000534538 FAM83GA6ND36 823 aa25.86■■□□□ 1.73
RECQL4-207ENST00000534538 PRR36Q9H6K5 1346 aa25.86■■□□□ 1.73
RECQL4-207ENST00000534538 SEPT12Q8IYM1 358 aa25.85■■□□□ 1.73
RECQL4-207ENST00000534538 PLEKHG5O94827 1062 aa25.84■■□□□ 1.73
RECQL4-207ENST00000534538 NWD2Q9ULI1 1742 aa25.84■■□□□ 1.73
RECQL4-207ENST00000534538 TULP4Q9NRJ4 1543 aa25.83■■□□□ 1.72
RECQL4-207ENST00000534538 BLMP54132 1417 aaPredicted RBP25.81■■□□□ 1.72
RECQL4-207ENST00000534538 ABCA3Q99758 1704 aa25.81■■□□□ 1.72
RECQL4-207ENST00000534538 TRPM3Q9HCF6 1732 aaPredicted RBP25.81■■□□□ 1.72
RECQL4-207ENST00000534538 CCDC9Q9Y3X0 531 aaKnown RBP25.81■■□□□ 1.72
RECQL4-207ENST00000534538 PLCH1Q4KWH8 1693 aa25.8■■□□□ 1.72
RECQL4-207ENST00000534538 NGDNQ8NEJ9 315 aaKnown RBP25.79■■□□□ 1.72
RECQL4-207ENST00000534538 ALS2Q96Q42 1657 aa25.77■■□□□ 1.72
RECQL4-207ENST00000534538 BRWD3Q6RI45 1802 aa25.77■■□□□ 1.72
RECQL4-207ENST00000534538 BTG4Q9NY30 223 aa25.77■■□□□ 1.72
RECQL4-207ENST00000534538 KRT27Q7Z3Y8 459 aa25.76■■□□□ 1.71
RECQL4-207ENST00000534538 NUDT16Q96DE0 195 aaKnown RBP25.75■■□□□ 1.71
RECQL4-207ENST00000534538 PAK3O75914 559 aaPredicted RBP25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms