RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 KDM2BQ8NHM5 1336 aa24.58■■□□□ 1.53
SMPD1-210ENST00000534405 FSD2A1L4K1 749 aa24.57■■□□□ 1.52
SMPD1-210ENST00000534405 FGD1P98174 961 aa24.57■■□□□ 1.52
SMPD1-210ENST00000534405 ADGRB3O60242 1522 aa24.57■■□□□ 1.52
SMPD1-210ENST00000534405 TPM2P07951 284 aa24.56■■□□□ 1.52
SMPD1-210ENST00000534405 GOLGA2Q08379 1002 aa24.56■■□□□ 1.52
SMPD1-210ENST00000534405 A0A0U1RQG5 324 aaPredicted RBP24.56■■□□□ 1.52
SMPD1-210ENST00000534405 CFAP65Q6ZU64 1925 aaKnown RBP24.55■■□□□ 1.52
SMPD1-210ENST00000534405 FRMPD1Q5SYB0 1578 aa24.55■■□□□ 1.52
SMPD1-210ENST00000534405 CHGAP10645 457 aaKnown RBP24.55■■□□□ 1.52
SMPD1-210ENST00000534405 NPATQ14207 1427 aa24.55■■□□□ 1.52
SMPD1-210ENST00000534405 MYO3AQ8NEV4 1616 aa24.55■■□□□ 1.52
SMPD1-210ENST00000534405 GOLGA6L3A6NEY3 463 aa24.53■■□□□ 1.52
SMPD1-210ENST00000534405 SLFN5Q08AF3 891 aa24.53■■□□□ 1.52
SMPD1-210ENST00000534405 SPINK5Q9NQ38 1064 aaPredicted RBP24.53■■□□□ 1.52
SMPD1-210ENST00000534405 POGZQ7Z3K3 1410 aa24.51■■□□□ 1.51
SMPD1-210ENST00000534405 APAF1O14727 1248 aa24.51■■□□□ 1.51
SMPD1-210ENST00000534405 GGT6Q6P531 493 aa24.51■■□□□ 1.51
SMPD1-210ENST00000534405 SBNO2Q9Y2G9 1366 aa24.51■■□□□ 1.51
SMPD1-210ENST00000534405 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
SMPD1-210ENST00000534405 CENPQQ7L2Z9 268 aaPredicted RBP24.5■■□□□ 1.51
SMPD1-210ENST00000534405 TRMT2AQ8IZ69 625 aaKnown RBP24.49■■□□□ 1.51
SMPD1-210ENST00000534405 TRAK1Q9UPV9 953 aa24.49■■□□□ 1.51
SMPD1-210ENST00000534405 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
SMPD1-210ENST00000534405 PPLO60437 1756 aa24.48■■□□□ 1.51
SMPD1-210ENST00000534405 NPM1P06748 294 aaKnown RBP eCLIP24.47■■□□□ 1.51
SMPD1-210ENST00000534405 MLH3Q9UHC1 1453 aa24.47■■□□□ 1.51
SMPD1-210ENST00000534405 TMEM132EQ6IEE7 984 aa24.46■■□□□ 1.51
SMPD1-210ENST00000534405 PANK2Q9BZ23 570 aa24.46■■□□□ 1.51
SMPD1-210ENST00000534405 C14orf93Q9H972 538 aaKnown RBP24.46■■□□□ 1.51
SMPD1-210ENST00000534405 DMRT2Q9Y5R5 561 aa24.45■■□□□ 1.51
SMPD1-210ENST00000534405 ADGRB1O14514 1584 aa24.45■■□□□ 1.5
SMPD1-210ENST00000534405 HECW2Q9P2P5 1572 aa24.44■■□□□ 1.5
SMPD1-210ENST00000534405 ESPNB1AK53 854 aa24.44■■□□□ 1.5
SMPD1-210ENST00000534405 ZC3H13Q5T200 1668 aaKnown RBP24.43■■□□□ 1.5
SMPD1-210ENST00000534405 SLC12A5Q9H2X9 1139 aa24.43■■□□□ 1.5
SMPD1-210ENST00000534405 NSD3Q9BZ95 1437 aa24.42■■□□□ 1.5
SMPD1-210ENST00000534405 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
SMPD1-210ENST00000534405 ABCC3O15438 1527 aa24.42■■□□□ 1.5
SMPD1-210ENST00000534405 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
SMPD1-210ENST00000534405 NKTRP30414 1462 aaKnown RBP24.4■■□□□ 1.5
SMPD1-210ENST00000534405 POLR3AO14802 1390 aaPredicted RBP24.4■■□□□ 1.5
SMPD1-210ENST00000534405 ANTXR1Q9H6X2 564 aa24.39■■□□□ 1.5
SMPD1-210ENST00000534405 SIGLEC1Q9BZZ2 1709 aa24.39■■□□□ 1.49
SMPD1-210ENST00000534405 RGS3P49796 1198 aa24.39■■□□□ 1.49
SMPD1-210ENST00000534405 MRE11P49959 708 aa24.39■■□□□ 1.49
SMPD1-210ENST00000534405 BECN1Q14457 450 aa24.39■■□□□ 1.49
SMPD1-210ENST00000534405 USP19O94966 1318 aa24.38■■□□□ 1.49
SMPD1-210ENST00000534405 BCAR3O75815 825 aa24.38■■□□□ 1.49
SMPD1-210ENST00000534405 RAPGEF3O95398 923 aa24.37■■□□□ 1.49
SMPD1-210ENST00000534405 NUTM2DQ5VT03 806 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-210ENST00000534405 OSCARQ8IYS5 282 aa24.37■■□□□ 1.49
SMPD1-210ENST00000534405 ERBB4Q15303 1308 aa24.37■■□□□ 1.49
SMPD1-210ENST00000534405 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-210ENST00000534405 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.37■■□□□ 1.49
SMPD1-210ENST00000534405 E9PSI1 815 aa24.36■■□□□ 1.49
SMPD1-210ENST00000534405 SHPRHQ149N8 1683 aa24.36■■□□□ 1.49
SMPD1-210ENST00000534405 MORC1Q86VD1 984 aa24.35■■□□□ 1.49
SMPD1-210ENST00000534405 CAMSAP1Q5T5Y3 1602 aa24.35■■□□□ 1.49
SMPD1-210ENST00000534405 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
SMPD1-210ENST00000534405 ARXQ96QS3 562 aa24.34■■□□□ 1.49
SMPD1-210ENST00000534405 PDE4CQ08493 712 aa24.34■■□□□ 1.49
SMPD1-210ENST00000534405 WWC1Q8IX03 1113 aa24.32■■□□□ 1.48
SMPD1-210ENST00000534405 MYH16Q9H6N6 1097 aa24.32■■□□□ 1.48
SMPD1-210ENST00000534405 VIRMAQ69YN4 1812 aaKnown RBP24.32■■□□□ 1.48
SMPD1-210ENST00000534405 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
SMPD1-210ENST00000534405 GLI2P10070 1586 aa24.32■■□□□ 1.48
SMPD1-210ENST00000534405 PIK3C2BO00750 1634 aa24.31■■□□□ 1.48
SMPD1-210ENST00000534405 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
SMPD1-210ENST00000534405 NGEFQ8N5V2 710 aa24.29■■□□□ 1.48
SMPD1-210ENST00000534405 ISY1Q9ULR0 285 aaKnown RBP24.29■■□□□ 1.48
SMPD1-210ENST00000534405 TULP4Q9NRJ4 1543 aa24.28■■□□□ 1.48
SMPD1-210ENST00000534405 DIP2CQ9Y2E4 1556 aa24.28■■□□□ 1.48
SMPD1-210ENST00000534405 MAP7D2Q96T17 732 aa24.28■■□□□ 1.48
SMPD1-210ENST00000534405 RRP7AQ9Y3A4 280 aaKnown RBP24.27■■□□□ 1.48
SMPD1-210ENST00000534405 ARHGEF28Q8N1W1 1705 aaKnown RBP24.27■■□□□ 1.48
SMPD1-210ENST00000534405 USP32Q8NFA0 1604 aa24.27■■□□□ 1.47
SMPD1-210ENST00000534405 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
SMPD1-210ENST00000534405 NEO1Q92859 1461 aa24.26■■□□□ 1.47
SMPD1-210ENST00000534405 MCM4P33991 863 aa24.26■■□□□ 1.47
SMPD1-210ENST00000534405 KIAA1211Q6ZU35 1233 aa24.26■■□□□ 1.47
SMPD1-210ENST00000534405 GRPEL1Q9HAV7 217 aa24.26■■□□□ 1.47
SMPD1-210ENST00000534405 MTHFSP49914 203 aa24.25■■□□□ 1.47
SMPD1-210ENST00000534405 IQSEC2Q5JU85 1478 aa24.25■■□□□ 1.47
SMPD1-210ENST00000534405 SMAP1Q8IYB5 467 aaPredicted RBP24.24■■□□□ 1.47
SMPD1-210ENST00000534405 CGNL1Q0VF96 1302 aa24.24■■□□□ 1.47
SMPD1-210ENST00000534405 VGFO15240 615 aaPredicted RBP24.24■■□□□ 1.47
SMPD1-210ENST00000534405 TERF1P54274 439 aa24.24■■□□□ 1.47
SMPD1-210ENST00000534405 IDI1Q13907 227 aa24.24■■□□□ 1.47
SMPD1-210ENST00000534405 RUNDC1Q96C34 613 aa24.24■■□□□ 1.47
SMPD1-210ENST00000534405 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
SMPD1-210ENST00000534405 TCP11L2Q8N4U5 519 aa24.23■■□□□ 1.47
SMPD1-210ENST00000534405 EVC2Q86UK5 1308 aa24.22■■□□□ 1.47
SMPD1-210ENST00000534405 GZF1Q9H116 711 aaPredicted RBP24.22■■□□□ 1.47
SMPD1-210ENST00000534405 CABP2Q9NPB3 220 aa24.22■■□□□ 1.47
SMPD1-210ENST00000534405 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
SMPD1-210ENST00000534405 TRIM44Q96DX7 344 aaPredicted RBP24.22■■□□□ 1.47
SMPD1-210ENST00000534405 NLRP1Q9C000 1473 aa24.21■■□□□ 1.47
SMPD1-210ENST00000534405 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
SMPD1-210ENST00000534405 ANKRD36BQ8N2N9 1353 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms