RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 ATAD2Q6PL18 1390 aa21.24■□□□□ 0.99
PHRF1-206ENST00000534320 NOL8Q76FK4 1167 aaKnown RBP21.24■□□□□ 0.99
PHRF1-206ENST00000534320 ARID3AQ99856 593 aa21.24■□□□□ 0.99
PHRF1-206ENST00000534320 TTC5Q8N0Z6 440 aa21.23■□□□□ 0.99
PHRF1-206ENST00000534320 RTEL1-TNFRSF6BF6WH68 1400 aa21.23■□□□□ 0.99
PHRF1-206ENST00000534320 USP35Q9P2H5 1018 aa21.23■□□□□ 0.99
PHRF1-206ENST00000534320 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
PHRF1-206ENST00000534320 DRC7Q8IY82 874 aa21.22■□□□□ 0.99
PHRF1-206ENST00000534320 FANCAO15360 1455 aa21.22■□□□□ 0.99
PHRF1-206ENST00000534320 ZNF692Q9BU19 519 aaPredicted RBP21.22■□□□□ 0.99
PHRF1-206ENST00000534320 PDE3AQ14432 1141 aa21.22■□□□□ 0.99
PHRF1-206ENST00000534320 THEMISQ8N1K5 641 aaPredicted RBP21.22■□□□□ 0.99
PHRF1-206ENST00000534320 C9orf78Q9NZ63 289 aaPredicted RBP21.22■□□□□ 0.99
PHRF1-206ENST00000534320 NEXNQ0ZGT2 675 aa21.21■□□□□ 0.99
PHRF1-206ENST00000534320 NSD3Q9BZ95 1437 aa21.21■□□□□ 0.99
PHRF1-206ENST00000534320 BCAR3O75815 825 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 LNPKQ9C0E8 428 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 KIAA0556O60303 1618 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 EVA1CP58658 441 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 WDR63Q8IWG1 891 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 GOLGA6L3A6NEY3 463 aa21.2■□□□□ 0.98
PHRF1-206ENST00000534320 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
PHRF1-206ENST00000534320 ITSN2Q9NZM3 1697 aa21.19■□□□□ 0.98
PHRF1-206ENST00000534320 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
PHRF1-206ENST00000534320 ABTB2Q8N961 1025 aa21.19■□□□□ 0.98
PHRF1-206ENST00000534320 TSR2Q969E8 191 aaKnown RBP21.19■□□□□ 0.98
PHRF1-206ENST00000534320 GNL2Q13823 731 aaKnown RBP21.19■□□□□ 0.98
PHRF1-206ENST00000534320 ATF3P18847 181 aa21.18■□□□□ 0.98
PHRF1-206ENST00000534320 WDR62O43379 1518 aa21.18■□□□□ 0.98
PHRF1-206ENST00000534320 FAM135AQ9P2D6 1515 aa21.18■□□□□ 0.98
PHRF1-206ENST00000534320 SYAP1Q96A49 352 aaPredicted RBP21.18■□□□□ 0.98
PHRF1-206ENST00000534320 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
PHRF1-206ENST00000534320 REC8O95072 547 aa21.16■□□□□ 0.98
PHRF1-206ENST00000534320 DDX58O95786 925 aaKnown RBP21.16■□□□□ 0.98
PHRF1-206ENST00000534320 HSP90B1P14625 803 aaKnown RBP21.16■□□□□ 0.98
PHRF1-206ENST00000534320 RAPGEF4Q8WZA2 1011 aa21.16■□□□□ 0.98
PHRF1-206ENST00000534320 GPRASP1Q5JY77 1395 aa21.16■□□□□ 0.98
PHRF1-206ENST00000534320 DHX29Q7Z478 1369 aaKnown RBP21.15■□□□□ 0.98
PHRF1-206ENST00000534320 HTATSF1O43719 755 aaKnown RBP21.15■□□□□ 0.98
PHRF1-206ENST00000534320 PLCH2O75038 1416 aa21.14■□□□□ 0.98
PHRF1-206ENST00000534320 SLC26A8Q96RN1 970 aa21.14■□□□□ 0.98
PHRF1-206ENST00000534320 KIF21AQ7Z4S6 1674 aa21.14■□□□□ 0.98
PHRF1-206ENST00000534320 TWISTNBQ3B726 338 aaPredicted RBP21.14■□□□□ 0.97
PHRF1-206ENST00000534320 DDX11L8A8MPP1 907 aa21.13■□□□□ 0.97
PHRF1-206ENST00000534320 ESCO1Q5FWF5 840 aa21.13■□□□□ 0.97
PHRF1-206ENST00000534320 SULT6B1Q6IMI4 303 aa21.13■□□□□ 0.97
PHRF1-206ENST00000534320 SCAF11Q99590 1463 aaKnown RBP21.13■□□□□ 0.97
PHRF1-206ENST00000534320 CT47B1P0C2W7 299 aaPredicted RBP21.12■□□□□ 0.97
PHRF1-206ENST00000534320 DIAPH3Q9NSV4 1193 aa21.12■□□□□ 0.97
PHRF1-206ENST00000534320 NLRP2Q9NX02 1062 aa21.11■□□□□ 0.97
PHRF1-206ENST00000534320 SLFN5Q08AF3 891 aa21.11■□□□□ 0.97
PHRF1-206ENST00000534320 NOB1Q9ULX3 412 aaKnown RBP21.11■□□□□ 0.97
PHRF1-206ENST00000534320 NINLQ9Y2I6 1382 aa21.11■□□□□ 0.97
PHRF1-206ENST00000534320 IDI1Q13907 227 aa21.1■□□□□ 0.97
PHRF1-206ENST00000534320 DENND4BO75064 1496 aaPredicted RBP21.1■□□□□ 0.97
PHRF1-206ENST00000534320 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
PHRF1-206ENST00000534320 POGZQ7Z3K3 1410 aa21.1■□□□□ 0.97
PHRF1-206ENST00000534320 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
PHRF1-206ENST00000534320 IFIT2P09913 472 aaKnown RBP21.09■□□□□ 0.97
PHRF1-206ENST00000534320 FOXD4L5Q5VV16 416 aaPredicted RBP21.09■□□□□ 0.97
PHRF1-206ENST00000534320 FOXD4L4Q8WXT5 416 aaPredicted RBP21.09■□□□□ 0.97
PHRF1-206ENST00000534320 C22orf23Q9BZE7 217 aa21.09■□□□□ 0.97
PHRF1-206ENST00000534320 NOS1P29475 1434 aa21.09■□□□□ 0.97
PHRF1-206ENST00000534320 PDZRN3Q9UPQ7 1066 aa21.08■□□□□ 0.97
PHRF1-206ENST00000534320 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
PHRF1-206ENST00000534320 CSPP1Q1MSJ5 1256 aa21.08■□□□□ 0.97
PHRF1-206ENST00000534320 RUFY2Q8WXA3 655 aa21.08■□□□□ 0.97
PHRF1-206ENST00000534320 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.97
PHRF1-206ENST00000534320 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.97
PHRF1-206ENST00000534320 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.97
PHRF1-206ENST00000534320 DUOX2Q9NRD8 1548 aa21.08■□□□□ 0.96
PHRF1-206ENST00000534320 FCHSD2O94868 740 aa21.08■□□□□ 0.96
PHRF1-206ENST00000534320 CCDC30Q5VVM6 783 aa21.08■□□□□ 0.96
PHRF1-206ENST00000534320 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.96
PHRF1-206ENST00000534320 PROSER2Q86WR7 435 aaPredicted RBP21.07■□□□□ 0.96
PHRF1-206ENST00000534320 HSP90AB4PQ58FF6 505 aa21.07■□□□□ 0.96
PHRF1-206ENST00000534320 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
PHRF1-206ENST00000534320 RRS1Q15050 365 aaKnown RBP21.06■□□□□ 0.96
PHRF1-206ENST00000534320 FBXO31Q5XUX0 539 aaPredicted RBP21.06■□□□□ 0.96
PHRF1-206ENST00000534320 GOLGA6L1Q8N7Z2 621 aa21.06■□□□□ 0.96
PHRF1-206ENST00000534320 EIF4G3O43432 1585 aaKnown RBP21.06■□□□□ 0.96
PHRF1-206ENST00000534320 GTF2E1P29083 439 aaPredicted RBP21.06■□□□□ 0.96
PHRF1-206ENST00000534320 UBTFL1P0CB47 393 aaPredicted RBP21.06■□□□□ 0.96
PHRF1-206ENST00000534320 RALGAPBQ86X10 1494 aa21.06■□□□□ 0.96
PHRF1-206ENST00000534320 G3BP1Q13283 466 aaKnown RBP eCLIP21.06■□□□□ 0.967e-7■■■■□ 25.3
PHRF1-206ENST00000534320 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
PHRF1-206ENST00000534320 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
PHRF1-206ENST00000534320 TMPOP42166 694 aaKnown RBP21.04■□□□□ 0.96
PHRF1-206ENST00000534320 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
PHRF1-206ENST00000534320 PLEKHO1Q53GL0 409 aaPredicted RBP21.04■□□□□ 0.96
PHRF1-206ENST00000534320 GNAI3P08754 354 aa21.04■□□□□ 0.96
PHRF1-206ENST00000534320 CHMP5Q9NZZ3 219 aa21.03■□□□□ 0.96
PHRF1-206ENST00000534320 CDC45O75419 566 aa21.03■□□□□ 0.96
PHRF1-206ENST00000534320 GSE1Q14687 1217 aa21.03■□□□□ 0.96
PHRF1-206ENST00000534320 MVPQ14764 893 aaKnown RBP21.03■□□□□ 0.96
PHRF1-206ENST00000534320 ANKLE2Q86XL3 938 aa21.03■□□□□ 0.96
PHRF1-206ENST00000534320 ISY1Q9ULR0 285 aaKnown RBP21.02■□□□□ 0.96
PHRF1-206ENST00000534320 KIF3AQ9Y496 699 aa21.02■□□□□ 0.96
PHRF1-206ENST00000534320 AIMP1Q12904 312 aaKnown RBP21.02■□□□□ 0.96
PHRF1-206ENST00000534320 RIC3Q7Z5B4 369 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms